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PI0015708 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015708
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr11:10983015..10983646
RNA-Seq ExpressionPI0015708
SyntenyPI0015708
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041103.1 uncharacterized protein E6C27_scaffold128G00060 [Cucumis melo var. makuwa]1.9e-0540.91Show/hide
Query:  YFVISDLTSSRNDRAPLLSGIFTLLSAISLLVG-MIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRA-----PLLLETIGHPYSIVSDPT
        + + SDLTSSRNDR  L     +   A+S       G +++++SD TS+RNDQA         FAVND TS+ + +A      L   TIGH +S  S  T
Subjt:  YFVISDLTSSRNDRAPLLSGIFTLLSAISLLVG-MIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRA-----PLLLETIGHPYSIVSDPT

Query:  STWNDRAYLF
        ST ND+A+ F
Subjt:  STWNDRAYLF
KAE8651715.1 hypothetical protein Csa_006216, partial [Cucumis sativus]3.1e-1152.69Show/hide
Query:  SGIFTLLSAISLLVGMIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRAPLLLETIGHPYSIVSDPTSTWNDRAYLFCRQRSHF
        S  FT+LS I LLV MI Y YSVV DPTSTRN++        IYF  ND TSSRND  PL             DPT+T +D+A L CRQRS+F
Subjt:  SGIFTLLSAISLLVGMIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRAPLLLETIGHPYSIVSDPTSTWNDRAYLFCRQRSHF
TrEMBL top hitse value%identityAlignment
A0A0A0LHK8 Uncharacterized protein2.2e-1550Show/hide
Query:  MIKHIYFVISDLTSSRNDRA--------PLL--SGIFTLLSAISLLVGMIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRAPLLLETIGH
        MIKH   ++ DLTS+RN+RA        P L  S  FT+LS I LLV MI Y YSVV DPTSTRN++        IYF  ND TSSRND  PL       
Subjt:  MIKHIYFVISDLTSSRNDRA--------PLL--SGIFTLLSAISLLVGMIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRAPLLLETIGH

Query:  PYSIVSDPTSTWNDRAYLFCRQRSHF
              DPT+T +D+A L CRQRS+F
Subjt:  PYSIVSDPTSTWNDRAYLFCRQRSHF
A0A5A7TD82 Reverse transcriptase domain-containing protein9.4e-0640.91Show/hide
Query:  YFVISDLTSSRNDRAPLLSGIFTLLSAISLLVG-MIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRA-----PLLLETIGHPYSIVSDPT
        + + SDLTSSRNDR  L     +   A+S       G +++++SD TS+RNDQA         FAVND TS+ + +A      L   TIGH +S  S  T
Subjt:  YFVISDLTSSRNDRAPLLSGIFTLLSAISLLVG-MIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRA-----PLLLETIGHPYSIVSDPT

Query:  STWNDRAYLF
        ST ND+A+ F
Subjt:  STWNDRAYLF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGCATATTTACTTTGTCATCAGCGATCTCACTTCTAGTAGGAACGATCGGGCACCTTTACTCTCGGGCATATTTACTTTGCTGTCAGCGATCTCACTTCTAGT
AGGAATGATCGGGTACTCTTACTCTGTCGTCAGCGATCCCACTTCTACTAGGAACGATCAGGCATATTTACTTTTCCGTCAACATATTTACTTTGCCGTCAATGATCCCA
CCTCTAGTAGGAACGATCGGGCACCTTTACTTTTAGAAACGATCGGGCACCCTTACTCTATCGTCAGCGATCCCACTTCTACTTGGAACGATCGGGCATACTTATTTTGT
CGTCAGCGATCCCACTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGCATATTTACTTTGTCATCAGCGATCTCACTTCTAGTAGGAACGATCGGGCACCTTTACTCTCGGGCATATTTACTTTGCTGTCAGCGATCTCACTTCTAGT
AGGAATGATCGGGTACTCTTACTCTGTCGTCAGCGATCCCACTTCTACTAGGAACGATCAGGCATATTTACTTTTCCGTCAACATATTTACTTTGCCGTCAATGATCCCA
CCTCTAGTAGGAACGATCGGGCACCTTTACTTTTAGAAACGATCGGGCACCCTTACTCTATCGTCAGCGATCCCACTTCTACTTGGAACGATCGGGCATACTTATTTTGT
CGTCAGCGATCCCACTTCTGA
Protein sequenceShow/hide protein sequence
MIKHIYFVISDLTSSRNDRAPLLSGIFTLLSAISLLVGMIGYSYSVVSDPTSTRNDQAYLLFRQHIYFAVNDPTSSRNDRAPLLLETIGHPYSIVSDPTSTWNDRAYLFC
RQRSHF