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PI0015711 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015711
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr10:1707042..1707245
RNA-Seq ExpressionPI0015711
SyntenyPI0015711
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041022.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]2.7e-2074.63Show/hide
Query:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        +ACCLLH LINREM N D+  + DE DST+ TT  DDIHYIETSNE SQWRDDLAEEMF+ WELCNQ
Subjt:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]4.7e-2076.12Show/hide
Query:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        +ACCLLH LINREM N D+  + DE DST+ATTA DDIHYIETSNE SQWRDDLAEEMF++WEL NQ
Subjt:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]4.7e-2076.12Show/hide
Query:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        +ACCLLH LINREM N D+  + DE DST+ATTA DDIHYIETSNE SQWRDDLAEEMF++WEL NQ
Subjt:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]4.7e-2076.12Show/hide
Query:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        +ACCLLH LINREM N D+  + DE DST+ATTA DDIHYIETSNE SQWRDDLAEEMF++WEL NQ
Subjt:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

TYK04902.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]1.6e-2080.95Show/hide
Query:  LLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        LLH LINREM N DM K+Y EGDSTYA T GDDIHYIETSNE SQW DDLAEEM S+WELCNQ
Subjt:  LLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

TrEMBL top hitse value%identityAlignment
A0A5A7TC28 Putative nuclease HARBI11.3e-2074.63Show/hide
Query:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        +ACCLLH LINREM N D+  + DE DST+ TT  DDIHYIETSNE SQWRDDLAEEMF+ WELCNQ
Subjt:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

A0A5A7TWH8 Retrotransposon protein2.3e-2076.12Show/hide
Query:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        +ACCLLH LINREM N D+  + DE DST+ATTA DDIHYIETSNE SQWRDDLAEEMF++WEL NQ
Subjt:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

A0A5A7UGH9 Retrotransposon protein2.3e-2076.12Show/hide
Query:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        +ACCLLH LINREM N D+  + DE DST+ATTA DDIHYIETSNE SQWRDDLAEEMF++WEL NQ
Subjt:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

A0A5D3C145 Putative nuclease HARBI17.8e-2180.95Show/hide
Query:  LLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        LLH LINREM N DM K+Y EGDSTYA T GDDIHYIETSNE SQW DDLAEEM S+WELCNQ
Subjt:  LLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

A0A5D3D9Z3 Retrotransposon protein2.3e-2076.12Show/hide
Query:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ
        +ACCLLH LINREM N D+  + DE DST+ATTA DDIHYIETSNE SQWRDDLAEEMF++WEL NQ
Subjt:  MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTGTTGTCTACTACACTACCTCATCAATAGAGAGATGATGAACACTGATATGACAAAGGATTACGATGAGGGTGATTCGACGTACGCAACGACTGCAGGTGATGA
CATTCACTACATTGAAACCTCTAATGAATTGAGTCAGTGGAGGGATGATCTGGCCGAAGAAATGTTTAGTAAGTGGGAGTTATGTAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTGTTGTCTACTACACTACCTCATCAATAGAGAGATGATGAACACTGATATGACAAAGGATTACGATGAGGGTGATTCGACGTACGCAACGACTGCAGGTGATGA
CATTCACTACATTGAAACCTCTAATGAATTGAGTCAGTGGAGGGATGATCTGGCCGAAGAAATGTTTAGTAAGTGGGAGTTATGTAATCAGTAG
Protein sequenceShow/hide protein sequence
MACCLLHYLINREMMNTDMTKDYDEGDSTYATTAGDDIHYIETSNELSQWRDDLAEEMFSKWELCNQ