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PI0015762 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015762
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr06:12417960..12418529
RNA-Seq ExpressionPI0015762
SyntenyPI0015762
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036886.1 zf-RVT domain-containing protein [Cucumis melo var. makuwa]1.3e-5465.99Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI
        M+VG+G  CRVWLDPWL GGAI+ Q+GE+V+YDAAS REARLS+FI  +GEW WPRVS EL++LWERVQ V PCLS+ D WV VPGRQG FS +SAWEAI
Subjt:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI

Query:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTQDRLSRW
         PR  +V W GLLW GGNIP+HSFCAWL I+DR    + +  R+  W
Subjt:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTQDRLSRW

KAA0042317.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.8e-6465.5Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI
        +EVGDG  CRVWLDPWL G  I+ Q+GE+V+YDAAS REARLSEFIG DGEW+WPRVS EL++LW+RVQ VRPCLS+ DRWV VPG QG FS +SA + I
Subjt:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI

Query:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG
         PR  +V W GLLWGGGN+P+HSFCAWL I+++LGT+DRL RWDS +P S +LCQG +      FF  P G
Subjt:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG

KAA0062318.1 uncharacterized protein E6C27_scaffold154G00690 [Cucumis melo var. makuwa]1.4e-6160.85Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI
        M+VG+G   RVWLDPWL  GAI+ Q+GE+V+YDAAS R+ARLS+FI  DGEW WPRVS EL++LWERVQ V PCLS+ D WV VPGR+G FS +SAWEA+
Subjt:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI

Query:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLGTISGLGIWRPLIGLGVGG
         PR  +V W GLLWGGGNI +H FCAWL I+DRLGT DRL RWDS +P  C          I+ FF          G W PLIGLG+GG
Subjt:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLGTISGLGIWRPLIGLGVGG

TYK12108.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]2.8e-5460.48Show/hide
Query:  DGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAIHPRS
        D R  R W    +  GAI+ Q+GE+V+YDAAS REARLS+FIG +GEW W RV  EL+ LW+RVQ V PCLS+ D WV VPGRQG FS +SAW+AI PR 
Subjt:  DGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAIHPRS

Query:  DKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG
         +V W GLLWGG NIP+HSFCAWL I+DRLGT+DRL RWDS +P  C+LC+G +      FF  P G
Subjt:  DKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG

XP_031737556.1 uncharacterized protein LOC116402448 [Cucumis sativus]8.7e-5659.65Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI
        MEVG+G+ CRVWLDP + GG II+Q GE+V+YDA S R+ARL +F+G DG+WRW  VS +L+++W+R+QGVRP  S+ D WV VPG    FS  SA EAI
Subjt:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI

Query:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG
         P S +V W+GLLWGGGNIP+HSF  WL I+DRLGT+DRLSRWDS IP SC+LC          FF  P G
Subjt:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG

TrEMBL top hitse value%identityAlignment
A0A5A7T440 Zf-RVT domain-containing protein6.1e-5565.99Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI
        M+VG+G  CRVWLDPWL GGAI+ Q+GE+V+YDAAS REARLS+FI  +GEW WPRVS EL++LWERVQ V PCLS+ D WV VPGRQG FS +SAWEAI
Subjt:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI

Query:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTQDRLSRW
         PR  +V W GLLW GGNIP+HSFCAWL I+DR    + +  R+  W
Subjt:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTQDRLSRW

A0A5A7TKU4 Non-LTR retroelement reverse transcriptase-like protein8.5e-6565.5Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI
        +EVGDG  CRVWLDPWL G  I+ Q+GE+V+YDAAS REARLSEFIG DGEW+WPRVS EL++LW+RVQ VRPCLS+ DRWV VPG QG FS +SA + I
Subjt:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI

Query:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG
         PR  +V W GLLWGGGN+P+HSFCAWL I+++LGT+DRL RWDS +P S +LCQG +      FF  P G
Subjt:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG

A0A5A7V3Z0 Reverse transcriptase domain-containing protein6.7e-6260.85Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI
        M+VG+G   RVWLDPWL  GAI+ Q+GE+V+YDAAS R+ARLS+FI  DGEW WPRVS EL++LWERVQ V PCLS+ D WV VPGR+G FS +SAWEA+
Subjt:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI

Query:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLGTISGLGIWRPLIGLGVGG
         PR  +V W GLLWGGGNI +H FCAWL I+DRLGT DRL RWDS +P  C          I+ FF          G W PLIGLG+GG
Subjt:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLGTISGLGIWRPLIGLGVGG

A0A5D3BDZ6 Zf-RVT domain-containing protein1.4e-5465.31Show/hide
Query:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI
        M+VG+G  CRVWLDPWL GGAI+ Q+GE+V+YDAAS REARLS+FI  +GEW WPRVS EL++LWERVQ V PCL++ D WV VPGRQG FS +SAWEAI
Subjt:  MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAI

Query:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTQDRLSRW
         PR  +V W GLLW GGNIP+HSFCAWL I+DR    + +  R+  W
Subjt:  HPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDR----LGTQDRLSRW

A0A5D3CLU1 Non-LTR retroelement reverse transcriptase-like protein1.4e-5460.48Show/hide
Query:  DGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAIHPRS
        D R  R W    +  GAI+ Q+GE+V+YDAAS REARLS+FIG +GEW W RV  EL+ LW+RVQ V PCLS+ D WV VPGRQG FS +SAW+AI PR 
Subjt:  DGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAIHPRS

Query:  DKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG
         +V W GLLWGG NIP+HSFCAWL I+DRLGT+DRL RWDS +P  C+LC+G +      FF  P G
Subjt:  DKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43730.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.5e-1040.62Show/hide
Query:  FSFSSAWEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC
        FS +    A+HP++  V W   +W   ++P+H+F  W+V  +RL T+DRL  W   IP  CLLC
Subjt:  FSFSSAWEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC

AT1G60720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.5e-1631.1Show/hide
Query:  VGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLS---------IGDRWVCVPGR---QGE
        +G+GR    W D W   G +I+ MG+           AR+ E +G++G W+ P      L      Q +   +S         I D +  V G    QG 
Subjt:  VGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLS---------IGDRWVCVPGR---QGE

Query:  FSFSSAWEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC
        FS +  W+AI PR+ ++ WA  +W  G +P+H+F  W+   DRL T+ RL+ W  +    C LC
Subjt:  FSFSSAWEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.5e-1037.7Show/hide
Query:  SSAWEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC
        ++ W  ++P  ++V W   +W  G IP+H+F AW+ +R RL T+DR+  W  + P  CL C
Subjt:  SSAWEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC

AT4G04650.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.5e-1630.43Show/hide
Query:  EVGDGRCCRVWLDPWLHGGAIIRQMGE------QVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGD-RW-VCVPGRQGEFSF
        EVG G   + W D W+  G +I  +G        +  DA      R + +       R P +  +L  L    QG+  C       W   +      FS 
Subjt:  EVGDGRCCRVWLDPWLHGGAIIRQMGE------QVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGD-RW-VCVPGRQGEFSF

Query:  SSAWEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC
           W A+HP+S  V W   +W   ++P+H+F  W+V  +RL T+DRL  W   IP  CLLC
Subjt:  SSAWEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.0e-1730.49Show/hide
Query:  EVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWV---------CVPGRQGEFS
        +VG G  C  W + W + G +I   G+     +   R A +++ +  DG W W   S     + + ++   P  S+ +  V          V G +    
Subjt:  EVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWV---------CVPGRQGEFS

Query:  FSSA--WEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC
        FSSA  W  ++P  +KV W   +W  G IP+H+F +W+ IR RL T+D+L  W   +P  CLLC
Subjt:  FSSA--WEAIHPRSDKVCWAGLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGGCAGATGGGCGAGCAGGTGGTGTATGATGCTGCAAGCAG
TAGGGAGGCTAGGCTTTCTGAGTTCATTGGCTTGGATGGCGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGAGAGGGTTCAGGGCGTCCGTCCTT
GTTTGAGTATTGGGGATCGCTGGGTGTGCGTTCCGGGTCGTCAGGGTGAGTTCTCGTTTTCGAGTGCGTGGGAGGCTATTCATCCTAGGAGTGACAAGGTTTGTTGGGCT
GGTCTGCTGTGGGGTGGGGGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCAGGATAGGTTGAGTAGGTGGGATAGTTTGAT
TCCTCGATCGTGTCTTCTTTGCCAGGGGGTGTTGAGTCTCGGGATCATCTGTTTTTTTCTTGTCCCTTTGGGTACGATATCTGGACTCGGGATATGGCGTCCTCTCATAG
GGTTGGGGGTGGGAGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGTTGGTGATGGTAGGTGTTGTCGTGTGTGGCTTGACCCTTGGCTGCACGGAGGCGCGATCATTCGGCAGATGGGCGAGCAGGTGGTGTATGATGCTGCAAGCAG
TAGGGAGGCTAGGCTTTCTGAGTTCATTGGCTTGGATGGCGAGTGGAGGTGGCCGAGGGTTTCTTGGGAGTTACTTGAGTTGTGGGAGAGGGTTCAGGGCGTCCGTCCTT
GTTTGAGTATTGGGGATCGCTGGGTGTGCGTTCCGGGTCGTCAGGGTGAGTTCTCGTTTTCGAGTGCGTGGGAGGCTATTCATCCTAGGAGTGACAAGGTTTGTTGGGCT
GGTCTGCTGTGGGGTGGGGGGAATATTCCTAGACATTCTTTCTGTGCTTGGTTGGTTATTAGGGATAGGTTGGGCACTCAGGATAGGTTGAGTAGGTGGGATAGTTTGAT
TCCTCGATCGTGTCTTCTTTGCCAGGGGGTGTTGAGTCTCGGGATCATCTGTTTTTTTCTTGTCCCTTTGGGTACGATATCTGGACTCGGGATATGGCGTCCTCTCATAG
GGTTGGGGGTGGGAGGTTGA
Protein sequenceShow/hide protein sequence
MEVGDGRCCRVWLDPWLHGGAIIRQMGEQVVYDAASSREARLSEFIGLDGEWRWPRVSWELLELWERVQGVRPCLSIGDRWVCVPGRQGEFSFSSAWEAIHPRSDKVCWA
GLLWGGGNIPRHSFCAWLVIRDRLGTQDRLSRWDSLIPRSCLLCQGVLSLGIICFFLVPLGTISGLGIWRPLIGLGVGG