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PI0015782 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015782
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr03:10834314..10834706
RNA-Seq ExpressionPI0015782
SyntenyPI0015782
Gene Ontology termsNA
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056771.1 putative mitochondrial protein [Cucumis melo var. makuwa]5.0e-2656.8Show/hide
Query:  TFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDH
        +F+  L+ T+ P   ++S   + +S LFLLSNICNLV +RLDS NY+LWKYQ+SSILKAHSLFGHIDD+     +   S T    ++++ +YLQW+SRD 
Subjt:  TFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDH

Query:  ALITLINATLSSFALAHVVATQSSK
        ALITLINATLSS AL HVV + +SK
Subjt:  ALITLINATLSSFALAHVVATQSSK

KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.7e-2764.04Show/hide
Query:  PESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLINATLS
        PESS+    P  +S LFLLSNICNLV +RLDS NY+LWKYQ+SSILKAHSLFGHIDD+     +   S T    ++++ EYLQW+SRD ALITLIN TLS
Subjt:  PESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLINATLS

Query:  SFALAHVVATQSSK
        S ALAHVV++ SSK
Subjt:  SFALAHVVATQSSK

KAA0067173.1 retrotransposon protein [Cucumis melo var. makuwa]3.8e-2660.83Show/hide
Query:  LALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITL
        L+ T+ P   ++S S + +S LFLLSNICNLV +RLDS NYILWKYQ+SSILKAHS FGHIDD+     +   S T    ++++ EYLQW+SR  ALITL
Subjt:  LALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITL

Query:  INATLSSFALAHVVATQSSK
        INATLSS ALAHVV + SSK
Subjt:  INATLSSFALAHVVATQSSK

TYJ97594.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.7e-2657.6Show/hide
Query:  TFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDH
        +F+  L+ T+ P   ++S   + +S LFLLSNICNLV +RLDS NY+LWKYQ+SSILKAHSLFGHIDD+     +   S T    ++++ EYLQW+SRD 
Subjt:  TFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDH

Query:  ALITLINATLSSFALAHVVATQSSK
        ALITLINATLSS AL HVV + +SK
Subjt:  ALITLINATLSSFALAHVVATQSSK

TYK11141.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.3e-2663.96Show/hide
Query:  STTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLINATLSSFA
        S+++PS + +S LFLLSNICNLV +RLDS NY+LWKYQ+SSILKAHSLFGHIDD+     + + S T    ++++ EY+QW+SRD ALITLINATLSS A
Subjt:  STTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLINATLSSFA

Query:  LAHVVATQSSK
        LAHVV + SSK
Subjt:  LAHVVATQSSK

TrEMBL top hitse value%identityAlignment
A0A5A7UTE5 Putative mitochondrial protein2.4e-2656.8Show/hide
Query:  TFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDH
        +F+  L+ T+ P   ++S   + +S LFLLSNICNLV +RLDS NY+LWKYQ+SSILKAHSLFGHIDD+     +   S T    ++++ +YLQW+SRD 
Subjt:  TFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDH

Query:  ALITLINATLSSFALAHVVATQSSK
        ALITLINATLSS AL HVV + +SK
Subjt:  ALITLINATLSSFALAHVVATQSSK

A0A5A7UZE5 Putative mitochondrial protein3.7e-2764.04Show/hide
Query:  PESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLINATLS
        PESS+    P  +S LFLLSNICNLV +RLDS NY+LWKYQ+SSILKAHSLFGHIDD+     +   S T    ++++ EYLQW+SRD ALITLIN TLS
Subjt:  PESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLINATLS

Query:  SFALAHVVATQSSK
        S ALAHVV++ SSK
Subjt:  SFALAHVVATQSSK

A0A5A7VGG0 Retrotransposon protein1.8e-2660.83Show/hide
Query:  LALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITL
        L+ T+ P   ++S S + +S LFLLSNICNLV +RLDS NYILWKYQ+SSILKAHS FGHIDD+     +   S T    ++++ EYLQW+SR  ALITL
Subjt:  LALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITL

Query:  INATLSSFALAHVVATQSSK
        INATLSS ALAHVV + SSK
Subjt:  INATLSSFALAHVVATQSSK

A0A5D3BEU0 Putative mitochondrial protein8.3e-2757.6Show/hide
Query:  TFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDH
        +F+  L+ T+ P   ++S   + +S LFLLSNICNLV +RLDS NY+LWKYQ+SSILKAHSLFGHIDD+     +   S T    ++++ EYLQW+SRD 
Subjt:  TFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDH

Query:  ALITLINATLSSFALAHVVATQSSK
        ALITLINATLSS AL HVV + +SK
Subjt:  ALITLINATLSSFALAHVVATQSSK

A0A5D3CH60 Putative mitochondrial protein6.3e-2763.96Show/hide
Query:  STTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLINATLSSFA
        S+++PS + +S LFLLSNICNLV +RLDS NY+LWKYQ+SSILKAHSLFGHIDD+     + + S T    ++++ EY+QW+SRD ALITLINATLSS A
Subjt:  STTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLINATLSSFA

Query:  LAHVVATQSSK
        LAHVV + SSK
Subjt:  LAHVVATQSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACACTTTTGAAATTGTCCTTGCTTTGACCAATGCCCCTGAATCATCCACAACCTCTCCTTCTCCTATGCTCTCTTCGCCATTGTTTCTCCTATCAAATATTTG
CAACCTCGTTTCCCTTCGGCTAGATTCCAACAACTATATTTTATGGAAATATCAAATTTCTTCTATTTTGAAAGCTCACTCCCTATTTGGGCATATTGATGACTCTTTTC
TCAAACTTTCACAATTTACTCGTTCACCTACAGGGATTCTCACAACAAAGGTTAGTTTTGAATATCTTCAATGGATCTCTAGAGATCATGCCCTAATCACCTTGATCAAC
GCAACTTTATCATCTTTTGCACTTGCCCATGTTGTTGCTACTCAATCTTCAAAGGACATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACACTTTTGAAATTGTCCTTGCTTTGACCAATGCCCCTGAATCATCCACAACCTCTCCTTCTCCTATGCTCTCTTCGCCATTGTTTCTCCTATCAAATATTTG
CAACCTCGTTTCCCTTCGGCTAGATTCCAACAACTATATTTTATGGAAATATCAAATTTCTTCTATTTTGAAAGCTCACTCCCTATTTGGGCATATTGATGACTCTTTTC
TCAAACTTTCACAATTTACTCGTTCACCTACAGGGATTCTCACAACAAAGGTTAGTTTTGAATATCTTCAATGGATCTCTAGAGATCATGCCCTAATCACCTTGATCAAC
GCAACTTTATCATCTTTTGCACTTGCCCATGTTGTTGCTACTCAATCTTCAAAGGACATATGA
Protein sequenceShow/hide protein sequence
MANTFEIVLALTNAPESSTTSPSPMLSSPLFLLSNICNLVSLRLDSNNYILWKYQISSILKAHSLFGHIDDSFLKLSQFTRSPTGILTTKVSFEYLQWISRDHALITLIN
ATLSSFALAHVVATQSSKDI