; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015786 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015786
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description28 kDa ribonucleoprotein, chloroplastic
Genome locationchr11:1908149..1911299
RNA-Seq ExpressionPI0015786
SyntenyPI0015786
Gene Ontology termsGO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025359.1 hypothetical protein SDJN02_11854 [Cucurbita argyrosperma subsp. argyrosperma]9.2e-11875.08Show/hide
Query:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKL------------VS---------LRHNHGERFPVLFTVLDNESALTEEAIVE
        MAN A+CL+ SS SS S  IL  K  N    KQLHS PSS HFD+ KL            VS         LRHNHG RFPVLFTVLD E+A+T E I E
Subjt:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKL------------VS---------LRHNHGERFPVLFTVLDNESALTEEAIVE

Query:  GDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDM
          VKSE SVSNQEVK LARPCELYVCNLPRSCDIAELVEMFKP+GTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SI ALD SDVGGREMRVRFAVDM
Subjt:  GDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDM

Query:  NPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGL
        NPK RN +NLHSSP+KNI+YESPYK+Y+GNL+WDVKP DLRNLF +FGTVVSAK+LNDRRAGKSR+YGFLSFSSAAERDA++SL+GTEF NRKL+V+EGL
Subjt:  NPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGL

Query:  ERSES
        ER+ES
Subjt:  ERSES

XP_004140529.1 28 kDa ribonucleoprotein, chloroplastic [Cucumis sativus]1.6e-14995.1Show/hide
Query:  MANLATCLTFSSSS--SPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLAR
        MANLAT LTFSSSS  SPSLWILKHKSP+YCTFKQLHSF SSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGS+SNQEVKKLAR
Subjt:  MANLATCLTFSSSS--SPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLAR

Query:  PCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIV
        PCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SI ALDGSDVGGREMRVRFAVDMN KKRN++NLHSSPKKNI+
Subjt:  PCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIV

Query:  YESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES
        YESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDAS+SLDGTE+NNRKLVVREGLERSES
Subjt:  YESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES

XP_008459818.1 PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis melo]4.9e-15195.77Show/hide
Query:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLARPC
        MANLAT LTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSE SVSNQEVKKLARPC
Subjt:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLARPC

Query:  ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYE
        ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SIAALDGSDVGGREMRVRFAVDMNPK RN++NL+SSPKKNI+YE
Subjt:  ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYE

Query:  SPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES
        SPYKVYVGNLSWDV+PGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDAS+SLDGTEFN RKLVVREG ERSES
Subjt:  SPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES

XP_022156980.1 28 kDa ribonucleoprotein, chloroplastic [Momordica charantia]1.1e-12376.05Show/hide
Query:  MANLATCLTFSSSSSPSL----WILKHKSPNYCTFKQLHSFPSSFHFDYTKL---------------------VSLRHNHGERFPVLFTVLDNESALTEE
        MAN ATCLT SSSSS S     WIL+     +CT KQLHS PSS HF Y+KL                      SL HN   RF VL  +LD ESA+TEE
Subjt:  MANLATCLTFSSSSSPSL----WILKHKSPNYCTFKQLHSFPSSFHFDYTKL---------------------VSLRHNHGERFPVLFTVLDNESALTEE

Query:  AIVEGDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRF
        AI E DVKSEG+ SNQEVKK A+PCELYVCNLPR+CDIAELVEMFKP+GTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SIAALDGSDVGGREMRVRF
Subjt:  AIVEGDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRF

Query:  AVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVV
        AVDM+PKKRN++NL+SSPKKNI+YESPYKVYVGNL+WDVKPGDLR+LFS+FGTVVSAKVLNDRRAGKSRVYGFLSFSSAAER+A++SLDGTEFNNRKL+V
Subjt:  AVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVV

Query:  REGLERSES
        REGLER+ES
Subjt:  REGLERSES

XP_038906862.1 28 kDa ribonucleoprotein, chloroplastic [Benincasa hispida]8.0e-14690.41Show/hide
Query:  MANLATCLTFSSSSS--------PSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQE
        MANLAT LTFSSSSS        PSLWILKHKSPNYC+FK+LHSFPSS HFD+TKLVSLRHNHG RFPVLFTVL+NESALTEE I EGDVKSEGSVSNQE
Subjt:  MANLATCLTFSSSSS--------PSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQE

Query:  VKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSS
        VKK ARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SIAALDGSDVGGREMRVRFAVDMNPKKRN++NLHSS
Subjt:  VKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSS

Query:  PKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES
        PKKNI+YESPYKVY+GNL+WDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDA++SLDGTE+NNRKLVVREGLER+ES
Subjt:  PKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES

TrEMBL top hitse value%identityAlignment
A0A0A0KAH9 Uncharacterized protein7.6e-15095.1Show/hide
Query:  MANLATCLTFSSSS--SPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLAR
        MANLAT LTFSSSS  SPSLWILKHKSP+YCTFKQLHSF SSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGS+SNQEVKKLAR
Subjt:  MANLATCLTFSSSS--SPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLAR

Query:  PCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIV
        PCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SI ALDGSDVGGREMRVRFAVDMN KKRN++NLHSSPKKNI+
Subjt:  PCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIV

Query:  YESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES
        YESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDAS+SLDGTE+NNRKLVVREGLERSES
Subjt:  YESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES

A0A1S3CB56 28 kDa ribonucleoprotein, chloroplastic2.4e-15195.77Show/hide
Query:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLARPC
        MANLAT LTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSE SVSNQEVKKLARPC
Subjt:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLARPC

Query:  ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYE
        ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SIAALDGSDVGGREMRVRFAVDMNPK RN++NL+SSPKKNI+YE
Subjt:  ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYE

Query:  SPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES
        SPYKVYVGNLSWDV+PGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDAS+SLDGTEFN RKLVVREG ERSES
Subjt:  SPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES

A0A5D3DM74 28 kDa ribonucleoprotein2.4e-15195.77Show/hide
Query:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLARPC
        MANLAT LTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSE SVSNQEVKKLARPC
Subjt:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLARPC

Query:  ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYE
        ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SIAALDGSDVGGREMRVRFAVDMNPK RN++NL+SSPKKNI+YE
Subjt:  ELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYE

Query:  SPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES
        SPYKVYVGNLSWDV+PGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDAS+SLDGTEFN RKLVVREG ERSES
Subjt:  SPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES

A0A6J1DRW5 28 kDa ribonucleoprotein, chloroplastic5.5e-12476.05Show/hide
Query:  MANLATCLTFSSSSSPSL----WILKHKSPNYCTFKQLHSFPSSFHFDYTKL---------------------VSLRHNHGERFPVLFTVLDNESALTEE
        MAN ATCLT SSSSS S     WIL+     +CT KQLHS PSS HF Y+KL                      SL HN   RF VL  +LD ESA+TEE
Subjt:  MANLATCLTFSSSSSPSL----WILKHKSPNYCTFKQLHSFPSSFHFDYTKL---------------------VSLRHNHGERFPVLFTVLDNESALTEE

Query:  AIVEGDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRF
        AI E DVKSEG+ SNQEVKK A+PCELYVCNLPR+CDIAELVEMFKP+GTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SIAALDGSDVGGREMRVRF
Subjt:  AIVEGDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRF

Query:  AVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVV
        AVDM+PKKRN++NL+SSPKKNI+YESPYKVYVGNL+WDVKPGDLR+LFS+FGTVVSAKVLNDRRAGKSRVYGFLSFSSAAER+A++SLDGTEFNNRKL+V
Subjt:  AVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVV

Query:  REGLERSES
        REGLER+ES
Subjt:  REGLERSES

A0A6J1H6A5 28 kDa ribonucleoprotein, chloroplastic1.0e-11774.75Show/hide
Query:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKL------------VS---------LRHNHGERFPVLFTVLDNESALTEEAIVE
        MAN A+CL+ SS SS S  IL  K  N    KQLHS PSS HFD+ KL            VS         LRH HG RFPV+FTVLD E+A+T E I E
Subjt:  MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKL------------VS---------LRHNHGERFPVLFTVLDNESALTEEAIVE

Query:  GDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDM
          VKSE SVSNQEVK LARPCELYVCNLPRSCDIAELVEMFKP+GTVLAAEVSRNPETGISKGCGYVTMGSINSAK+SI ALD SDVGGREMRVRFAVDM
Subjt:  GDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDM

Query:  NPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGL
        NPK RN +NLHSSP+KNI+YESPYK+Y+GNL+WDVKP DLRNLFS+FGTVVSAK+LNDRRAGKSR+YGFLSFSSAAERDA++SL+GTEF NRKL+V+EGL
Subjt:  NPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGL

Query:  ERSES
        ER+ES
Subjt:  ERSES

SwissProt top hitse value%identityAlignment
P19683 31 kDa ribonucleoprotein, chloroplastic8.1e-2433.76Show/hide
Query:  GERFPVLFTVLDNESALTEEAIVE--GDV-KSEGSVSNQEVKKLARPCE---LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMG
        G+    LF    +     EE  VE  GD  +S+   +++E ++   P E   L+V NLP   D   L  +F+  G V  AEV  N +T  S+G G+VTM 
Subjt:  GERFPVLFTVLDNESALTEEAIVE--GDV-KSEGSVSNQEVKKLARPCE---LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMG

Query:  SINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFL
        ++  A+ ++   +  DV GR + V      N   R  +     P+    +E  Y++YVGN+ W +    L  LFS  G VVSA+V+ DR  G+SR +GF+
Subjt:  SINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFL

Query:  SFSSAAE-RDASMSLDGTEFNNRKLVVREGLERS
        + +S AE  DA  +LDG   + R + V    +RS
Subjt:  SFSSAAE-RDASMSLDGTEFNNRKLVVREGLERS

P28644 28 kDa ribonucleoprotein, chloroplastic1.1e-2535.59Show/hide
Query:  AIVEGDVKSEGSVS---------------NQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAA
        A++EG+   EG+VS                Q   +     +L+V NLP   D  +L  +F   G V  AEV  N ET  S+G G+VTM ++  A+ ++  
Subjt:  AIVEGDVKSEGSVS---------------NQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAA

Query:  LDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDA
        L+G D+ GR++ V  A      +R       +P+ +  +E   +VYVGNL WDV    L  LFS  G VVSA+V++DR  G+SR +GF++ SS +E  DA
Subjt:  LDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDA

Query:  SMSLDGTEFNNRKLVVREGLER
          +LDG   + R + V    ER
Subjt:  SMSLDGTEFNNRKLVVREGLER

Q04836 31 kDa ribonucleoprotein, chloroplastic1.9e-2537.04Show/hide
Query:  NESALTEEAIVEGDVKSEGSVSNQ-EVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDV
        +E  ++E    EGDV SEG+VS + E  + +   +L+V NL    +   L  +F+  GTV  AEV  N ET  S+G G+VTM S++ A+ ++   +  D+
Subjt:  NESALTEEAIVEGDVKSEGSVSNQ-EVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDV

Query:  GGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASMSLDG
         GR + V  A     +         +P+   VYE  ++VYVGNL WDV  G L  LFS  G VV A+V+ DR  G+SR +GF++ S   E  +A  +LDG
Subjt:  GGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASMSLDG

Query:  TEFNNRKLVVREGLER
             R + V    ER
Subjt:  TEFNNRKLVVREGLER

Q08935 29 kDa ribonucleoprotein A, chloroplastic2.5e-2536.98Show/hide
Query:  EGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKR
        +G    +E +  +   +++V NLP S D A L E+F+  G V   EV  +  TG S+G G+VTM S    + +    +G ++ GR +RV       P+KR
Subjt:  EGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKR

Query:  NVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASMSLDGTEFNNRKLVV
           +     +    ++S  +VYVGNL+W V    L  LFS  G VV AKV+ DR +G+SR +GF+++SSA E  +A  SLDG + N R + V
Subjt:  NVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASMSLDGTEFNNRKLVV

Q9FGS0 RNA-binding protein CP31B, chloroplastic1.8e-2333.5Show/hide
Query:  VEGDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAV
        V+   +SE  V   E  + A+   L+V NLP   D   L  +F+  GTV  +EV  N +T  S+G G+VTM ++  A+ ++   +  +V GR + V  A 
Subjt:  VEGDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAV

Query:  DMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASM-SLDGTEFNNRKLVVR
            +           ++  VY++ +++YVGNL WDV  G L  LFS  G VV A+V++DR  G+SR +GF+  S+  E + ++ +LDG     R + V 
Subjt:  DMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASM-SLDGTEFNNRKLVVR

Query:  EGLERS
           ER+
Subjt:  EGLERS

Arabidopsis top hitse value%identityAlignment
AT1G01080.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.4e-7359.38Show/hide
Query:  TVLDNESALTEEAIVEGDVK--SEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAAL
        +VLD E    EE +V+G+ +   +  VS  E  K  RPCELYVCN+PRS DIA+L++MF+P+GTV++ EVSRNP+TG S+G GYVTMGSINSAKI+IA+L
Subjt:  TVLDNESALTEEAIVEGDVK--SEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAAL

Query:  DGSDVGGREMRVRFAVDMNP-KKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDAS
        DG++VGGREMRVR++VDMNP  +RN + L+S+PKK ++YES +KVYVGNL W  +P  LRN FS+FGT+VS +VL+DR+ G++RV+ FLSF+S  ERDA+
Subjt:  DGSDVGGREMRVRFAVDMNP-KKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDAS

Query:  MSLDGTEFNNRKLVVREGLERSES
        +S +GT++  R+++VREG+E+SES
Subjt:  MSLDGTEFNNRKLVVREGLERSES

AT1G01080.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-7159.11Show/hide
Query:  TVLDNESALTEEAIVEGDVK--SEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAE-VSRNPETGISKGCGYVTMGSINSAKISIAA
        +VLD E    EE +V+G+ +   +  VS  E  K  RPCELYVCN+PRS DIA+L++MF+P+GTV++ E VSRNP+TG S+G GYVTMGSINSAKI+IA+
Subjt:  TVLDNESALTEEAIVEGDVK--SEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAE-VSRNPETGISKGCGYVTMGSINSAKISIAA

Query:  LDGSDVGGREMRVRFAVDMNP-KKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDA
        LDG++VGGREMRVR++VDMNP  +RN + L+S+PKK ++YES +KVYVGNL W  +P  LRN FS+FGT+VS +VL+DR+ G++RV+ FLSF+S  ERDA
Subjt:  LDGSDVGGREMRVRFAVDMNP-KKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDA

Query:  SMSLDGTEFNNRKLVVREGLERSES
        ++S +GT++  R+++VREG+E+SES
Subjt:  SMSLDGTEFNNRKLVVREGLERSES

AT3G52380.1 chloroplast RNA-binding protein 331.3e-2432.44Show/hide
Query:  DNESALTEEAIVEGDVKSEGSVSNQEVKKLARPCE-------LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIA
        D   A  EE   E +V+ EG    +EV++  +  +       LYV NLP +   +EL ++F   GTV+  ++  +  T  S+G G+VTMGSI  AK ++ 
Subjt:  DNESALTEEAIVEGDVKSEGSVSNQEVKKLARPCE-------LYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIA

Query:  ALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RD
          + S +GGR ++V F       +  V             +SP+KVY GNL W++    L++ F     V+ AKV+ +R  G+SR +GF+SF SA   + 
Subjt:  ALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RD

Query:  ASMSLDGTEFNNRKLVVREGLERSE
        A  +++G E   R L +    ER +
Subjt:  ASMSLDGTEFNNRKLVVREGLERSE

AT4G24770.1 31-kDa RNA binding protein1.4e-2637.04Show/hide
Query:  NESALTEEAIVEGDVKSEGSVSNQ-EVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDV
        +E  ++E    EGDV SEG+VS + E  + +   +L+V NL    +   L  +F+  GTV  AEV  N ET  S+G G+VTM S++ A+ ++   +  D+
Subjt:  NESALTEEAIVEGDVKSEGSVSNQ-EVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDV

Query:  GGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASMSLDG
         GR + V  A     +         +P+   VYE  ++VYVGNL WDV  G L  LFS  G VV A+V+ DR  G+SR +GF++ S   E  +A  +LDG
Subjt:  GGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAE-RDASMSLDG

Query:  TEFNNRKLVVREGLER
             R + V    ER
Subjt:  TEFNNRKLVVREGLER

AT5G50250.1 chloroplast RNA-binding protein 31B1.3e-2433.5Show/hide
Query:  VEGDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAV
        V+   +SE  V   E  + A+   L+V NLP   D   L  +F+  GTV  +EV  N +T  S+G G+VTM ++  A+ ++   +  +V GR + V  A 
Subjt:  VEGDVKSEGSVSNQEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAV

Query:  DMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASM-SLDGTEFNNRKLVVR
            +           ++  VY++ +++YVGNL WDV  G L  LFS  G VV A+V++DR  G+SR +GF+  S+  E + ++ +LDG     R + V 
Subjt:  DMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASM-SLDGTEFNNRKLVVR

Query:  EGLERS
           ER+
Subjt:  EGLERS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACCTTGCGACCTGCTTAACCTTCTCTTCTTCTTCTTCTCCTTCTCTATGGATCCTCAAACATAAATCTCCAAATTACTGTACATTCAAACAACTGCACTCTTT
CCCTTCATCCTTTCACTTCGACTACACGAAGCTCGTTTCCCTAAGGCATAACCATGGGGAAAGGTTTCCAGTGCTTTTCACTGTTCTTGACAATGAATCTGCGCTTACGG
AGGAGGCCATTGTGGAAGGTGATGTTAAGAGCGAAGGCAGCGTTTCAAATCAGGAAGTGAAAAAGCTAGCACGTCCTTGTGAGCTATACGTTTGTAATTTGCCGAGGAGT
TGCGACATTGCGGAGCTGGTTGAGATGTTTAAACCTTATGGCACAGTCTTGGCTGCTGAGGTTTCTCGGAATCCAGAGACAGGCATAAGCAAGGGATGTGGCTATGTCAC
AATGGGTTCAATAAACTCGGCTAAAATTTCAATTGCAGCATTAGATGGTTCTGATGTTGGCGGACGTGAAATGCGCGTTAGATTTGCTGTTGATATGAATCCCAAAAAGA
GGAACGTTGATAACTTGCATTCATCACCCAAGAAGAATATAGTATATGAAAGTCCTTACAAAGTATATGTCGGAAATCTTTCGTGGGATGTCAAACCTGGAGACCTGAGG
AACCTTTTTAGCAGATTTGGAACTGTGGTCAGTGCAAAAGTTTTGAACGATCGTAGAGCTGGAAAAAGCCGCGTTTACGGGTTTCTATCATTTTCTTCAGCTGCAGAGCG
TGATGCATCAATGTCTTTGGATGGAACAGAGTTCAACAACAGGAAGCTTGTTGTTAGAGAAGGTTTGGAAAGGAGCGAGTCTTGA
mRNA sequenceShow/hide mRNA sequence
CTAATCCATACCCACACAGTGGGAGAGAGAGAGGGAACGAAACTTCTTCCTCATCTCCGCCATGGCTAACCTTGCGACCTGCTTAACCTTCTCTTCTTCTTCTTCTCCTT
CTCTATGGATCCTCAAACATAAATCTCCAAATTACTGTACATTCAAACAACTGCACTCTTTCCCTTCATCCTTTCACTTCGACTACACGAAGCTCGTTTCCCTAAGGCAT
AACCATGGGGAAAGGTTTCCAGTGCTTTTCACTGTTCTTGACAATGAATCTGCGCTTACGGAGGAGGCCATTGTGGAAGGTGATGTTAAGAGCGAAGGCAGCGTTTCAAA
TCAGGAAGTGAAAAAGCTAGCACGTCCTTGTGAGCTATACGTTTGTAATTTGCCGAGGAGTTGCGACATTGCGGAGCTGGTTGAGATGTTTAAACCTTATGGCACAGTCT
TGGCTGCTGAGGTTTCTCGGAATCCAGAGACAGGCATAAGCAAGGGATGTGGCTATGTCACAATGGGTTCAATAAACTCGGCTAAAATTTCAATTGCAGCATTAGATGGT
TCTGATGTTGGCGGACGTGAAATGCGCGTTAGATTTGCTGTTGATATGAATCCCAAAAAGAGGAACGTTGATAACTTGCATTCATCACCCAAGAAGAATATAGTATATGA
AAGTCCTTACAAAGTATATGTCGGAAATCTTTCGTGGGATGTCAAACCTGGAGACCTGAGGAACCTTTTTAGCAGATTTGGAACTGTGGTCAGTGCAAAAGTTTTGAACG
ATCGTAGAGCTGGAAAAAGCCGCGTTTACGGGTTTCTATCATTTTCTTCAGCTGCAGAGCGTGATGCATCAATGTCTTTGGATGGAACAGAGTTCAACAACAGGAAGCTT
GTTGTTAGAGAAGGTTTGGAAAGGAGCGAGTCTTGAATGCAGCCAACTAAAGTAATGAACACTATGGAAGAATTATTCAGAAACTTCCTCTGGAAAGGTAAGAATGATGG
TAAGAGTCTTCATCTTGTCAAGTAGGAAAATCTCCTTCATCCCAAGGAGAAAGAAGGGCTCGGCCGAACGGATCGGAATAGAGCCCTCCTAGCAAAATGAATTTGGCATT
ATCAATGTGAGAAAATAACTATGGAACCACGCCTCTCGACAACTAACTGGGCAGCAGCTCGCAAGGGTTCATGGCCATTACGGAACATTGCTCTCTGATTCATGATAGAA
GATCCTATGATTTTGATGATGGAGCTAATATTTCCTTCTGATAGGACTTATGGCTTGGAAATTAATCTTTTGCAAGAAATATCCCTTATTATATTTATATATATATATTA
TATTTTAATCTTTTATCTTTCCCTCATCGAAGAAGGGACTGCCAAGGATTTTTGGAATTTTTGGAACATTGAGTGTGGATTTTAGAACTTGGGATTGTGATGGGTGCGTT
TGGATTAAATTTCTAAGTATTTATAAACGTTTTTTGAAATATTTAGAAAGTCAATTCAAACATACACGAAATGCGTG
Protein sequenceShow/hide protein sequence
MANLATCLTFSSSSSPSLWILKHKSPNYCTFKQLHSFPSSFHFDYTKLVSLRHNHGERFPVLFTVLDNESALTEEAIVEGDVKSEGSVSNQEVKKLARPCELYVCNLPRS
CDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGSINSAKISIAALDGSDVGGREMRVRFAVDMNPKKRNVDNLHSSPKKNIVYESPYKVYVGNLSWDVKPGDLR
NLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASMSLDGTEFNNRKLVVREGLERSES