; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015805 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015805
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr02:18085812..18086242
RNA-Seq ExpressionPI0015805
SyntenyPI0015805
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047407.1 retrotransposon gag protein [Cucumis melo var. makuwa]3.6e-3175Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRW ND+Q+  QA S+S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.0e-2973.81Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKC  ++E+ N++R+YDPHSNTYN+GWRDNPNLRW ND+Q+  QA S+S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
KAA0062012.1 retrotransposon gag protein [Cucumis melo var. makuwa]6.8e-3072.62Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N++R+YDPH NTYN+ WRDNPNLRW ND+Q+  QA S+S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
TYK07549.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.6e-2973.81Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN+GWRDN NLRW ND+Q+  QA S+S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
TYK19600.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.6e-2971.43Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTS +QG  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRW ND+Q+  QA  +S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
TrEMBL top hitse value%identityAlignment
A0A5A7V0Q7 Retrotransposon gag protein9.6e-3073.81Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKC  ++E+ N++R+YDPHSNTYN+GWRDNPNLRW ND+Q+  QA S+S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
A0A5A7V1C6 Retrotransposon gag protein3.3e-3072.62Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N++R+YDPH NTYN+ WRDNPNLRW ND+Q+  QA S+S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
A0A5D3CB46 Retrotransposon gag protein1.2e-2973.81Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTSFVQG   KV KCGVCGLVGHPNDKCP ++E+ N++R+YDPHSNTYN+GWRDN NLRW ND+Q+  QA S+S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
A0A5D3CRR8 Retrotransposon gag protein1.7e-3175Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTSFVQG  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRW ND+Q+  QA S+S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
A0A5D3D815 Retrotransposon gag protein1.2e-2971.43Show/hide
Query:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
        MLNMTTLLTS +QG  +KV KCGVCGLVGHPNDKCP+++E+ N++RKYDPH NTYN+GWRDNPNLRW ND+Q+  QA  +S+NQ
Subjt:  MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTAATATGACTACTTTACTAACCTCTTTTGTGCAAGGTAGATCTGTGAAAGTCGCTAAGTGTGGGGTGTGCGGTCTAGTCGGACATCCTAACGACAAGTGCCCTGA
CTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAATACATACAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGAGAAACGACAGCCAAAGAC
CCGCGCAAGCAACTTCATCTTCAAATAATCAAGCAAATATCTCAACTAACAAACGCCATAAGCAAACTAGAAGGCAAAGGCAAGCTTCCAGCTCAGCCAGATCATGCCAA
CGTAAGTGCCATCTCGCTCAGAAGCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTAATATGACTACTTTACTAACCTCTTTTGTGCAAGGTAGATCTGTGAAAGTCGCTAAGTGTGGGGTGTGCGGTCTAGTCGGACATCCTAACGACAAGTGCCCTGA
CTTAGTGGAAGAGGCAAATGTCATTAGGAAGTACGATCCTCATAGCAATACATACAATGCCGGTTGGAGAGACAACCCTAACCTTAGATGGAGAAACGACAGCCAAAGAC
CCGCGCAAGCAACTTCATCTTCAAATAATCAAGCAAATATCTCAACTAACAAACGCCATAAGCAAACTAGAAGGCAAAGGCAAGCTTCCAGCTCAGCCAGATCATGCCAA
CGTAAGTGCCATCTCGCTCAGAAGCAGTAA
Protein sequenceShow/hide protein sequence
MLNMTTLLTSFVQGRSVKVAKCGVCGLVGHPNDKCPDLVEEANVIRKYDPHSNTYNAGWRDNPNLRWRNDSQRPAQATSSSNNQANISTNKRHKQTRRQRQASSSARSCQ
RKCHLAQKQ