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PI0015868 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015868
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr03:22059802..22060301
RNA-Seq ExpressionPI0015868
SyntenyPI0015868
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040874.1 hypothetical protein E6C27_scaffold345G00270 [Cucumis melo var. makuwa]4.1e-3463.36Show/hide
Query:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE
        LSPL+DHL+G +E+ SD+SL+G HVVDS ++ VGTSKT +++P KQ LRP  LL+EIRRGKM V  KDI   +PPSKG   PK PL KV STHAPLK  E
Subjt:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE

Query:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF
         PLDTS +Q   +P+PSQW  VGE VVSNFF
Subjt:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF

KAA0042070.1 hypothetical protein E6C27_scaffold67G005320 [Cucumis melo var. makuwa]1.3e-3264.62Show/hide
Query:  SPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFEP
        SPL+ HL+GLVE+ +D+SL G HVVDST+EGV TSKTPV++P +Q LRP TLLEEIRR KM V  K I   NPPSKG   P+  L KV STHAPLK  E 
Subjt:  SPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFEP

Query:  PLDTSRKQIAGHPKPSQWVGVGEKVVSNFF
        PL  S +QI   P+PSQW  VGEKVVSNFF
Subjt:  PLDTSRKQIAGHPKPSQWVGVGEKVVSNFF

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]2.7e-3364.34Show/hide
Query:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIEN-SNPPSKGPKAPLGKVKSTHAPLKIFEPP
        LSPL+DHL+GL+E  SD+SL G H VDS  E VGTS+TPV +PT+Q LRP  LLEEIRRGKM V  KD+EN S+     PKA L KV S HAPLK  E P
Subjt:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIEN-SNPPSKGPKAPLGKVKSTHAPLKIFEPP

Query:  LDTSRKQIAGHPKPSQWVGVGEKVVSNFF
        LD S KQ   +P+PSQW  VGEKVVSNFF
Subjt:  LDTSRKQIAGHPKPSQWVGVGEKVVSNFF

KAA0061097.1 hypothetical protein E6C27_scaffold348G00060 [Cucumis melo var. makuwa]5.1e-3263.36Show/hide
Query:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE
        LSPL+DHL+GL+E  SD+SL+G H VDS  E VGTSKTPV +P +Q LRP  LLEEIRRGKM V EKD+E  +P SK    PKA L KV S HAPLK  E
Subjt:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE

Query:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF
         PL  S K+   +P+PSQW  VGEKVVSNFF
Subjt:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF

TYK03767.1 hypothetical protein E5676_scaffold863G001500 [Cucumis melo var. makuwa]5.1e-3263.36Show/hide
Query:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE
        LSPL+DHL+GL+E  SD+SL+G H VDS  E VGTSKTPV +P +Q LRP  LLEEIRRGKM V EKD+E  +P SK    PKA L KV S HAPLK  E
Subjt:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE

Query:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF
         PL  S K+   +P+PSQW  VGEKVVSNFF
Subjt:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF

TrEMBL top hitse value%identityAlignment
A0A5A7TBN8 Uncharacterized protein2.0e-3463.36Show/hide
Query:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE
        LSPL+DHL+G +E+ SD+SL+G HVVDS ++ VGTSKT +++P KQ LRP  LL+EIRRGKM V  KDI   +PPSKG   PK PL KV STHAPLK  E
Subjt:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE

Query:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF
         PLDTS +Q   +P+PSQW  VGE VVSNFF
Subjt:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF

A0A5A7TX42 Uncharacterized protein1.3e-3364.34Show/hide
Query:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIEN-SNPPSKGPKAPLGKVKSTHAPLKIFEPP
        LSPL+DHL+GL+E  SD+SL G H VDS  E VGTS+TPV +PT+Q LRP  LLEEIRRGKM V  KD+EN S+     PKA L KV S HAPLK  E P
Subjt:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIEN-SNPPSKGPKAPLGKVKSTHAPLKIFEPP

Query:  LDTSRKQIAGHPKPSQWVGVGEKVVSNFF
        LD S KQ   +P+PSQW  VGEKVVSNFF
Subjt:  LDTSRKQIAGHPKPSQWVGVGEKVVSNFF

A0A5A7V2J6 Uncharacterized protein2.5e-3263.36Show/hide
Query:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE
        LSPL+DHL+GL+E  SD+SL+G H VDS  E VGTSKTPV +P +Q LRP  LLEEIRRGKM V EKD+E  +P SK    PKA L KV S HAPLK  E
Subjt:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE

Query:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF
         PL  S K+   +P+PSQW  VGEKVVSNFF
Subjt:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF

A0A5D3BW91 Uncharacterized protein2.5e-3263.36Show/hide
Query:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE
        LSPL+DHL+GL+E  SD+SL+G H VDS  E VGTSKTPV +P +Q LRP  LLEEIRRGKM V EKD+E  +P SK    PKA L KV S HAPLK  E
Subjt:  LSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFE

Query:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF
         PL  S K+   +P+PSQW  VGEKVVSNFF
Subjt:  PPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF

A0A5D3D2A0 PMD domain-containing protein6.5e-3364.62Show/hide
Query:  SPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFEP
        SPL+ HL+GLVE+ +D+SL G HVVDST+EGV TSKTPV++P +Q LRP TLLEEIRR KM V  K I   NPPSKG   P+  L KV STHAPLK  E 
Subjt:  SPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKG---PKAPLGKVKSTHAPLKIFEP

Query:  PLDTSRKQIAGHPKPSQWVGVGEKVVSNFF
        PL  S +QI   P+PSQW  VGEKVVSNFF
Subjt:  PLDTSRKQIAGHPKPSQWVGVGEKVVSNFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAAATAGGCACCTTTCACCTTTGGACGATCATCTTCAAGGACTTGTAGAGGTATGTAGTGATGACTCTCTAATAGGGTC
TCATGTCGTGGATTCAACCCTTGAAGGAGTTGGTACCTCAAAGACACCAGTTACTGAACCAACTAAACAATACTTACGTCCTCCTACTCTTCTCGAGGAGATTCGTCGAG
GCAAGATGAAGGTGAATGAAAAAGACATTGAAAATTCAAATCCTCCATCCAAAGGTCCCAAAGCGCCTTTAGGGAAGGTCAAATCCACACATGCGCCTCTCAAGATTTTC
GAGCCTCCTTTAGACACTTCTAGAAAACAGATAGCAGGACATCCTAAGCCTTCTCAGTGGGTTGGTGTTGGTGAAAAGGTGGTGTCAAACTTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTGGAAATAGGCACCTTTCACCTTTGGACGATCATCTTCAAGGACTTGTAGAGGTATGTAGTGATGACTCTCTAATAGGGTC
TCATGTCGTGGATTCAACCCTTGAAGGAGTTGGTACCTCAAAGACACCAGTTACTGAACCAACTAAACAATACTTACGTCCTCCTACTCTTCTCGAGGAGATTCGTCGAG
GCAAGATGAAGGTGAATGAAAAAGACATTGAAAATTCAAATCCTCCATCCAAAGGTCCCAAAGCGCCTTTAGGGAAGGTCAAATCCACACATGCGCCTCTCAAGATTTTC
GAGCCTCCTTTAGACACTTCTAGAAAACAGATAGCAGGACATCCTAAGCCTTCTCAGTGGGTTGGTGTTGGTGAAAAGGTGGTGTCAAACTTCTTTTAG
Protein sequenceShow/hide protein sequence
MVYFTERFLSGNRHLSPLDDHLQGLVEVCSDDSLIGSHVVDSTLEGVGTSKTPVTEPTKQYLRPPTLLEEIRRGKMKVNEKDIENSNPPSKGPKAPLGKVKSTHAPLKIF
EPPLDTSRKQIAGHPKPSQWVGVGEKVVSNFF