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PI0015875 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015875
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionUnknown protein
Genome locationchr08:7229138..7231169
RNA-Seq ExpressionPI0015875
SyntenyPI0015875
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54650.1 hypothetical protein Csa_012899 [Cucumis sativus]9.6e-1463.16Show/hide
Query:  RWAVFVDVACLERHQVSGVGNMVIDGYGSLVATTALQVPILYTPLLAEAWALCEGMC-------FARQLLIPLVIF
        ++ VFV V CLE HQVSGVGNM+IDGY SLV   ALQVPILYTPLLAEA ALCE  C       F   LL+ +V+F
Subjt:  RWAVFVDVACLERHQVSGVGNMVIDGYGSLVATTALQVPILYTPLLAEAWALCEGMC-------FARQLLIPLVIF
TrEMBL top hitse value%identityAlignment
A0A0A0KYC1 Uncharacterized protein4.6e-1463.16Show/hide
Query:  RWAVFVDVACLERHQVSGVGNMVIDGYGSLVATTALQVPILYTPLLAEAWALCEGMC-------FARQLLIPLVIF
        ++ VFV V CLE HQVSGVGNM+IDGY SLV   ALQVPILYTPLLAEA ALCE  C       F   LL+ +V+F
Subjt:  RWAVFVDVACLERHQVSGVGNMVIDGYGSLVATTALQVPILYTPLLAEAWALCEGMC-------FARQLLIPLVIF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGTTTGGTTGTCGTCCGGTGGAGCTGTAGCAGTCAAGTCGTGCAATGGTCGTTGGGCGGTTTTTGTTGATGTTGCCTGTTTGGAGCGTCATCAAGTGTCAGGTGT
TGGCAATATGGTTATTGATGGATATGGTTCATTGGTGGCTACGACTGCTCTCCAGGTTCCTATTCTTTATACTCCGTTACTTGCGGAAGCCTGGGCTTTATGTGAAGGCA
TGTGTTTTGCTCGTCAGCTTCTAATTCCCTTGGTCATTTTTGGTTCGGATTGTCTTGTGTTCATTCGTCTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGTTTGGTTGTCGTCCGGTGGAGCTGTAGCAGTCAAGTCGTGCAATGGTCGTTGGGCGGTTTTTGTTGATGTTGCCTGTTTGGAGCGTCATCAAGTGTCAGGTGT
TGGCAATATGGTTATTGATGGATATGGTTCATTGGTGGCTACGACTGCTCTCCAGGTTCCTATTCTTTATACTCCGTTACTTGCGGAAGCCTGGGCTTTATGTGAAGGCA
TGTGTTTTGCTCGTCAGCTTCTAATTCCCTTGGTCATTTTTGGTTCGGATTGTCTTGTGTTCATTCGTCTTGTTTAG
Protein sequenceShow/hide protein sequence
MAVWLSSGGAVAVKSCNGRWAVFVDVACLERHQVSGVGNMVIDGYGSLVATTALQVPILYTPLLAEAWALCEGMCFARQLLIPLVIFGSDCLVFIRLV