; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0015877 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015877
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:26565852..26566876
RNA-Seq ExpressionPI0015877
SyntenyPI0015877
Gene Ontology termsNA
InterPro domainsIPR024752 - Myb/SANT-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038975.1 retrotransposon protein [Cucumis melo var. makuwa]8.6e-6144.22Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M++S+RAP+H WTREEE TLVECL+ELVSMGGWKSDN TFRPGYLA ++RMM+EKLPGC ++ TT ID RIKTLKRTFQAI+EMRGP  SGFGWNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNWVKVH-----------------------------------------------------------------------DVVASRPERSGEGR
        I+AEK+LFDNWV+ H                                                                       DV ASRP R+ EGR
Subjt:  IIAEKDLFDNWVKVH-----------------------------------------------------------------------DVVASRPERSGEGR

Query:  PSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVI
          SSGSKRKR       LE I  A++  N+QL+ IAEWP     ++   R      L+ +P L+ +++A   R L   + D++ F+ +P+D +  +  V+
Subjt:  PSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVI

Query:  LQD
        LQD
Subjt:  LQD

KAA0053511.1 retrotransposon protein [Cucumis melo var. makuwa]1.3e-6147.64Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M++S+RAP+H WTREEE TL+ECL+ELVSMGGWKSDN TFR GYLA ++RMM+EKLPGC ++ TT ID RIKTLKRTFQAI EMRGP  SGFGWNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNWVKVH-------------------------------------------DVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYE
        I+AEK+LFDNWV+ H                                           DV ASRP R+ EGR  SSGSKRKR       +E I  A++  
Subjt:  IIAEKDLFDNWVKVH-------------------------------------------DVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYE

Query:  NDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQD
        N+QLK IAEWP     ++   R      L+ +P L+ +++A   R L   + D++ F+ +P+D +  +  V+L+D
Subjt:  NDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQD

KAA0060663.1 retrotransposon protein [Cucumis melo var. makuwa]2.7e-6248.89Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M SSSR PKHTWT+EEE+     LVELV+ GGW+SDN TFRPGYL  + RMM+ K+PGC+I   +TID RIK +KR F A++EMRGPN SGFGWNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNW-------------------------------------VKVHDVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKA
        I+AEK++FD+W                                     +   D++ +R  R  E R  S+GSKRKR GH  ++ +I+R+A+EYEN+QL  
Subjt:  IIAEKDLFDNW-------------------------------------VKVHDVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKA

Query:  IAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQDN
        IAEWP    +D   TR  +V QL+AIP L+ +++ R MRIL RNV DMK+FL++ D+ K  YY++ILQ+N
Subjt:  IAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQDN

KAA0065892.1 retrotransposon protein [Cucumis melo var. makuwa]1.7e-6145.03Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M SSSR PKHTWT+EEE+ LV CLVELV+ GGW+SDN TFRPGYL  + RMM+ K+PGC+I   +TID RIK +KR F A++EMRGPNYSGF WNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNW-----------VKVH----------------------------------------------------------DVVASRPERSGEGRPS
        I+AEK++FD+W           + VH                                                          D++ +R  R  E R  
Subjt:  IIAEKDLFDNW-----------VKVH----------------------------------------------------------DVVASRPERSGEGRPS

Query:  SSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQ
        SSGSKRKR GH  ++ +I+R+A+EY N+QL  IAEWP   ++D   TR  +V QL+ IP L+ +++ R MRIL RNV DMK+FL++PD+ K  Y ++ILQ
Subjt:  SSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQ

Query:  DN
        +N
Subjt:  DN

TYK10662.1 retrotransposon protein [Cucumis melo var. makuwa]4.5e-6250.93Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M SSSR PKHTWT+EEE+ LVECLVELV+ GGW+SDN TFRPGYL  + RMM+ K+PGC+I   +TID RIK +KR F A++EMRGPN SGFGWNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNW----VK-------VH----------------------DVVASRP---ERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAI
        I+AEK++FD+W    VK       VH                      D+ ++ P    R  E R  SSGSKRKR GH  ++ +I+R A+EY N+QL  I
Subjt:  IIAEKDLFDNW----VK-------VH----------------------DVVASRP---ERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAI

Query:  AEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQDN
        AEWP   ++D   TR  +V QL+AIP L+ +++ R M    RNV DMK+FL++PD+ K  Y ++ILQ+N
Subjt:  AEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQDN

TrEMBL top hitse value%identityAlignment
A0A5A7TC56 Retrotransposon protein4.1e-6144.22Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M++S+RAP+H WTREEE TLVECL+ELVSMGGWKSDN TFRPGYLA ++RMM+EKLPGC ++ TT ID RIKTLKRTFQAI+EMRGP  SGFGWNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNWVKVH-----------------------------------------------------------------------DVVASRPERSGEGR
        I+AEK+LFDNWV+ H                                                                       DV ASRP R+ EGR
Subjt:  IIAEKDLFDNWVKVH-----------------------------------------------------------------------DVVASRPERSGEGR

Query:  PSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVI
          SSGSKRKR       LE I  A++  N+QL+ IAEWP     ++   R      L+ +P L+ +++A   R L   + D++ F+ +P+D +  +  V+
Subjt:  PSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVI

Query:  LQD
        LQD
Subjt:  LQD

A0A5A7UIZ2 Retrotransposon protein6.4e-6247.64Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M++S+RAP+H WTREEE TL+ECL+ELVSMGGWKSDN TFR GYLA ++RMM+EKLPGC ++ TT ID RIKTLKRTFQAI EMRGP  SGFGWNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNWVKVH-------------------------------------------DVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYE
        I+AEK+LFDNWV+ H                                           DV ASRP R+ EGR  SSGSKRKR       +E I  A++  
Subjt:  IIAEKDLFDNWVKVH-------------------------------------------DVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYE

Query:  NDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQD
        N+QLK IAEWP     ++   R      L+ +P L+ +++A   R L   + D++ F+ +P+D +  +  V+L+D
Subjt:  NDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQD

A0A5A7UXH8 Retrotransposon protein1.3e-6248.89Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M SSSR PKHTWT+EEE+     LVELV+ GGW+SDN TFRPGYL  + RMM+ K+PGC+I   +TID RIK +KR F A++EMRGPN SGFGWNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNW-------------------------------------VKVHDVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKA
        I+AEK++FD+W                                     +   D++ +R  R  E R  S+GSKRKR GH  ++ +I+R+A+EYEN+QL  
Subjt:  IIAEKDLFDNW-------------------------------------VKVHDVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKA

Query:  IAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQDN
        IAEWP    +D   TR  +V QL+AIP L+ +++ R MRIL RNV DMK+FL++ D+ K  YY++ILQ+N
Subjt:  IAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQDN

A0A5A7VC47 Retrotransposon protein8.4e-6245.03Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M SSSR PKHTWT+EEE+ LV CLVELV+ GGW+SDN TFRPGYL  + RMM+ K+PGC+I   +TID RIK +KR F A++EMRGPNYSGF WNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNW-----------VKVH----------------------------------------------------------DVVASRPERSGEGRPS
        I+AEK++FD+W           + VH                                                          D++ +R  R  E R  
Subjt:  IIAEKDLFDNW-----------VKVH----------------------------------------------------------DVVASRPERSGEGRPS

Query:  SSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQ
        SSGSKRKR GH  ++ +I+R+A+EY N+QL  IAEWP   ++D   TR  +V QL+ IP L+ +++ R MRIL RNV DMK+FL++PD+ K  Y ++ILQ
Subjt:  SSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQ

Query:  DN
        +N
Subjt:  DN

A0A5D3CHB8 Retrotransposon protein2.2e-6250.93Show/hide
Query:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC
        M SSSR PKHTWT+EEE+ LVECLVELV+ GGW+SDN TFRPGYL  + RMM+ K+PGC+I   +TID RIK +KR F A++EMRGPN SGFGWNDE KC
Subjt:  MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKC

Query:  IIAEKDLFDNW----VK-------VH----------------------DVVASRP---ERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAI
        I+AEK++FD+W    VK       VH                      D+ ++ P    R  E R  SSGSKRKR GH  ++ +I+R A+EY N+QL  I
Subjt:  IIAEKDLFDNW----VK-------VH----------------------DVVASRP---ERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAI

Query:  AEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQDN
        AEWP   ++D   TR  +V QL+AIP L+ +++ R M    RNV DMK+FL++PD+ K  Y ++ILQ+N
Subjt:  AEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDDFKLDYYTVILQDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTTCGTCGAGAGCCCCCAAGCATACGTGGACCAGAGAAGAAGAGTCAACCCTCGTGGAATGTCTGGTGGAGTTGGTGTCCATGGGGGGGTGGAAATCGGACAA
CAGCACATTCCGACCCGGTTACTTGGCAATGATTATGCGAATGATGTCGGAAAAGCTCCCAGGGTGTAGCATACAGGGGACTACGACTATTGACTATCGAATCAAGACAT
TGAAGCGCACCTTTCAAGCCATATCGGAGATGCGGGGCCCTAACTACAGTGGATTCGGCTGGAATGACGAGGTCAAATGCATAATTGCAGAGAAAGACCTCTTTGACAAT
TGGGTGAAGGTACATGACGTAGTCGCCTCACGTCCGGAACGGTCGGGTGAGGGTAGGCCGAGTTCGAGCGGTTCTAAAAGGAAGCGATGGGGCCATAATGCAGAAGCTCT
TGAGATCATTCGCAGCGCCATGGAATATGAGAATGACCAGCTTAAGGCAATTGCAGAATGGCCGAAGGAAGCACAGGAAGACGAATACACAACCCGTGCAGCAGTCGTGG
CGCAATTGCAGGCCATCCCTAGACTATCAAGAATCAACAAGGCGCGCTGTATGCGAATACTCACGCGAAACGTGGTTGATATGAAATCGTTTTTGCAAATACCTGACGAC
TTTAAGCTCGACTACTACACGGTCATTCTCCAAGACAATGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTTCGTCGAGAGCCCCCAAGCATACGTGGACCAGAGAAGAAGAGTCAACCCTCGTGGAATGTCTGGTGGAGTTGGTGTCCATGGGGGGGTGGAAATCGGACAA
CAGCACATTCCGACCCGGTTACTTGGCAATGATTATGCGAATGATGTCGGAAAAGCTCCCAGGGTGTAGCATACAGGGGACTACGACTATTGACTATCGAATCAAGACAT
TGAAGCGCACCTTTCAAGCCATATCGGAGATGCGGGGCCCTAACTACAGTGGATTCGGCTGGAATGACGAGGTCAAATGCATAATTGCAGAGAAAGACCTCTTTGACAAT
TGGGTGAAGGTACATGACGTAGTCGCCTCACGTCCGGAACGGTCGGGTGAGGGTAGGCCGAGTTCGAGCGGTTCTAAAAGGAAGCGATGGGGCCATAATGCAGAAGCTCT
TGAGATCATTCGCAGCGCCATGGAATATGAGAATGACCAGCTTAAGGCAATTGCAGAATGGCCGAAGGAAGCACAGGAAGACGAATACACAACCCGTGCAGCAGTCGTGG
CGCAATTGCAGGCCATCCCTAGACTATCAAGAATCAACAAGGCGCGCTGTATGCGAATACTCACGCGAAACGTGGTTGATATGAAATCGTTTTTGCAAATACCTGACGAC
TTTAAGCTCGACTACTACACGGTCATTCTCCAAGACAATGCGTGA
Protein sequenceShow/hide protein sequence
MASSSRAPKHTWTREEESTLVECLVELVSMGGWKSDNSTFRPGYLAMIMRMMSEKLPGCSIQGTTTIDYRIKTLKRTFQAISEMRGPNYSGFGWNDEVKCIIAEKDLFDN
WVKVHDVVASRPERSGEGRPSSSGSKRKRWGHNAEALEIIRSAMEYENDQLKAIAEWPKEAQEDEYTTRAAVVAQLQAIPRLSRINKARCMRILTRNVVDMKSFLQIPDD
FKLDYYTVILQDNA