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PI0015885 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015885
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr12:13957121..13958717
RNA-Seq ExpressionPI0015885
SyntenyPI0015885
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041279.1 gag/pol protein [Cucumis melo var. makuwa]4.6e-4470.29Show/hide
Query:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN
        +ECPP P +NASQ+V+DAYD W KAN +AR+YILASMSD+LSKKHE MVTA++        FGQ SIQI+ EAIKY+YN RMKEGQSVREHVL+M+V FN
Subjt:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN

Query:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        VA+ NGAV DE+SQV +IL+SLPK+FLQF SNV MNKI
Subjt:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]5.1e-4368.12Show/hide
Query:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN
        +ECP  P  NA++TVR+ Y+ W KAN KAR YILAS+S+VL+KKHESM+TA++        FGQ S QI+H+A+KY+YN RM EG SVREHVL+MMV FN
Subjt:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN

Query:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        VAE NGAVIDE SQV FILESLP+SFLQFRSN VMNKI
Subjt:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

KAA0063887.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-4571.01Show/hide
Query:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN
        +ECPP P +NASQ+V+DAYDHWTKAN KA +Y+LAS+SD+LSKKHE MVTA++        FGQPSIQI+ EAIKYVYN RMKEGQSVREHVL M+V FN
Subjt:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN

Query:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        VAE N A+ DE+SQV +IL+SL KSFLQF SNV MNKI
Subjt:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

TYK15919.1 gag/pol protein [Cucumis melo var. makuwa]7.1e-4571.01Show/hide
Query:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN
        +ECPP P +NASQ+V+DAYDHWTKAN KA +Y+LAS+SD+LSKKHE MVTA++        FGQPSIQI+ EAIKYVYN RMKEGQSVREHVL M+V FN
Subjt:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN

Query:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        VAE N A+ DE+SQV +IL+SL KSFLQF SNV MNKI
Subjt:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

TYK21841.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-4470.8Show/hide
Query:  ECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTA--------QKFGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFNV
        ECPP P +NASQ+V+D YD WTKAN KARVYILASMSD+LSKKHE MVTA        + FGQ SIQI+ +AIKYVYN  MKEGQSVR+HV+DM+V FNV
Subjt:  ECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTA--------QKFGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFNV

Query:  AETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        AE NG V DE+SQ+ FIL+SLPKSFLQF SN  MNKI
Subjt:  AETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein2.4e-4368.12Show/hide
Query:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN
        +ECP  P  NA++TVR+ Y+ W KAN KAR YILAS+S+VL+KKHESM+TA++        FGQ S QI+H+A+KY+YN RM EG SVREHVL+MMV FN
Subjt:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN

Query:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        VAE NGAVIDE SQV FILESLP+SFLQFRSN VMNKI
Subjt:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

A0A5A7TIU9 Gag/pol protein2.2e-4470.29Show/hide
Query:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN
        +ECPP P +NASQ+V+DAYD W KAN +AR+YILASMSD+LSKKHE MVTA++        FGQ SIQI+ EAIKY+YN RMKEGQSVREHVL+M+V FN
Subjt:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN

Query:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        VA+ NGAV DE+SQV +IL+SLPK+FLQF SNV MNKI
Subjt:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

A0A5A7VA67 Gag/pol protein3.4e-4571.01Show/hide
Query:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN
        +ECPP P +NASQ+V+DAYDHWTKAN KA +Y+LAS+SD+LSKKHE MVTA++        FGQPSIQI+ EAIKYVYN RMKEGQSVREHVL M+V FN
Subjt:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN

Query:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        VAE N A+ DE+SQV +IL+SL KSFLQF SNV MNKI
Subjt:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

A0A5D3D0D9 Gag/pol protein3.4e-4571.01Show/hide
Query:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN
        +ECPP P +NASQ+V+DAYDHWTKAN KA +Y+LAS+SD+LSKKHE MVTA++        FGQPSIQI+ EAIKYVYN RMKEGQSVREHVL M+V FN
Subjt:  QECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTAQK--------FGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFN

Query:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        VAE N A+ DE+SQV +IL+SL KSFLQF SNV MNKI
Subjt:  VAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

A0A5D3DDU7 Gag/pol protein9.9e-4570.8Show/hide
Query:  ECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTA--------QKFGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFNV
        ECPP P +NASQ+V+D YD WTKAN KARVYILASMSD+LSKKHE MVTA        + FGQ SIQI+ +AIKYVYN  MKEGQSVR+HV+DM+V FNV
Subjt:  ECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESMVTA--------QKFGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFNV

Query:  AETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI
        AE NG V DE+SQ+ FIL+SLPKSFLQF SN  MNKI
Subjt:  AETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCACCCCTTCCACAACACGACGGTGAACGTTTTCGACGGTAACCATCCACGACGGTCTGACCATCCTTCCACGGAAAGCTCGTCGGCTGACTATCACGGACGACA
ACCATCCATGAAGTGCGCGAAACCCCTTTCTACGACCACATTCACGCAAAAATCGGACGGAATTTCGTCGAAATTTCAGGAATGTCCTCCTTCCCCTGTTCGAAATGCAT
CCCAGACTGTCAGGGATGCATATGACCACTGGACAAAGGCCAATGGCAAGGCTCGAGTCTACATCTTGGCTAGTATGTCTGACGTACTAAGCAAGAAGCATGAGTCCATG
GTCACTGCACAGAAGTTTGGACAACCGTCTATTCAAATCCGACACGAGGCTATAAAGTACGTTTATAATGTCCGTATGAAAGAGGGCCAATCTGTTAGAGAACATGTTCT
CGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGGCGGTCATTGACGAGCAGAGTCAAGTGTTCTTTATCTTGGAATCTCTTCCGAAGAGCTTCCTTCAATTCC
GTAGCAATGTGGTTATGAACAAGATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCACCCCTTCCACAACACGACGGTGAACGTTTTCGACGGTAACCATCCACGACGGTCTGACCATCCTTCCACGGAAAGCTCGTCGGCTGACTATCACGGACGACA
ACCATCCATGAAGTGCGCGAAACCCCTTTCTACGACCACATTCACGCAAAAATCGGACGGAATTTCGTCGAAATTTCAGGAATGTCCTCCTTCCCCTGTTCGAAATGCAT
CCCAGACTGTCAGGGATGCATATGACCACTGGACAAAGGCCAATGGCAAGGCTCGAGTCTACATCTTGGCTAGTATGTCTGACGTACTAAGCAAGAAGCATGAGTCCATG
GTCACTGCACAGAAGTTTGGACAACCGTCTATTCAAATCCGACACGAGGCTATAAAGTACGTTTATAATGTCCGTATGAAAGAGGGCCAATCTGTTAGAGAACATGTTCT
CGACATGATGGTCCAATTCAACGTGGCAGAAACGAACGGGGCGGTCATTGACGAGCAGAGTCAAGTGTTCTTTATCTTGGAATCTCTTCCGAAGAGCTTCCTTCAATTCC
GTAGCAATGTGGTTATGAACAAGATATAG
Protein sequenceShow/hide protein sequence
MGHPFHNTTVNVFDGNHPRRSDHPSTESSSADYHGRQPSMKCAKPLSTTTFTQKSDGISSKFQECPPSPVRNASQTVRDAYDHWTKANGKARVYILASMSDVLSKKHESM
VTAQKFGQPSIQIRHEAIKYVYNVRMKEGQSVREHVLDMMVQFNVAETNGAVIDEQSQVFFILESLPKSFLQFRSNVVMNKI