| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0026242.1 gag/pol protein [Cucumis melo var. makuwa] | 2.8e-49 | 60.5 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHGLPPGDVWTTVHSNR--------
MSSSIIALLK ++L G+NYA WKS LN+ILVI DLRFVL+EECPP +NASQ+VRDAYDRWTKAN+KAR+YILA+ + S R
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHGLPPGDVWTTVHSNR--------
Query: ---HEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQSQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIHKKKGGKGK
EAIKYVYNARMKEG VREHVL+M+V FNV +MNGAV DE+ +SL KGQKEGEAN++HS+RF A SSS +KKI K+KGGKGK
Subjt: ---HEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQSQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIHKKKGGKGK
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| KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa] | 7.7e-47 | 48.97 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
M+S+ + +L +KL G+NYA+WK+ +N +L+I+DLRFVL+EECP P NA++TVR+ Y+RW KANEKAR YILA+ L ++ ++
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
Query: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
+ +H+A+KY+YNARM EG SVREHVL+MMV FNVAEMNGAVIDE S QTF+SLMK KG
Subjt: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
Query: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
QK GEANVA S ++F +GS+SGTKS PSSSG KK KKKGG+G
Subjt: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 7.7e-47 | 48.97 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
M+S+ + +L +KL G+NYA+WK+ +N +L+I+DLRFVL+EECP P NA++TVR+ Y+RW KANEKAR YILA+ L ++ ++
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
Query: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
+ +H+A+KY+YNARM EG SVREHVL+MMV FNVAEMNGAVIDE S QTF+SLMK KG
Subjt: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
Query: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
QK GEANVA S ++F +GS+SGTKS PSSSG KK KKKGG+G
Subjt: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
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| TYK00843.1 gag/pol protein [Cucumis melo var. makuwa] | 2.6e-50 | 58.02 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHGLPPGDVWTTVH-----------
MSSSIIALLK E L G+NYA WKS LN+ILVI DLRF+LMEECPP P +NAS+++RDAY+R TKAN+KA +YILA+ D+ + H
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHGLPPGDVWTTVH-----------
Query: -----------SNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQSQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTK
+ EAIKYVYNA MKEGQSVREH LDM+V FNVAEMNGAVIDE+SQ+ KGQK+GEANVAH +RF APSSSG++
Subjt: -----------SNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQSQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTK
Query: KIHKKKGGKGKG
KI K+KG KGKG
Subjt: KIHKKKGGKGKG
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 7.7e-47 | 48.97 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
M+S+ + +L +KL G+NYA+WK+ +N +L+I+DLRFVL+EECP P NA++TVR+ Y+RW KANEKAR YILA+ L ++ ++
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
Query: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
+ +H+A+KY+YNARM EG SVREHVL+MMV FNVAEMNGAVIDE S QTF+SLMK KG
Subjt: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
Query: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
QK GEANVA S ++F +GS+SGTKS PSSSG KK KKKGG+G
Subjt: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SM77 Gag/pol protein | 1.4e-49 | 60.5 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHGLPPGDVWTTVHSNR--------
MSSSIIALLK ++L G+NYA WKS LN+ILVI DLRFVL+EECPP +NASQ+VRDAYDRWTKAN+KAR+YILA+ + S R
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHGLPPGDVWTTVHSNR--------
Query: ---HEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQSQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIHKKKGGKGK
EAIKYVYNARMKEG VREHVL+M+V FNV +MNGAV DE+ +SL KGQKEGEAN++HS+RF A SSS +KKI K+KGGKGK
Subjt: ---HEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQSQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTKKIHKKKGGKGK
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| A0A5A7SMH8 Gag/pol protein | 3.7e-47 | 48.97 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
M+S+ + +L +KL G+NYA+WK+ +N +L+I+DLRFVL+EECP P NA++TVR+ Y+RW KANEKAR YILA+ L ++ ++
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
Query: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
+ +H+A+KY+YNARM EG SVREHVL+MMV FNVAEMNGAVIDE S QTF+SLMK KG
Subjt: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
Query: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
QK GEANVA S ++F +GS+SGTKS PSSSG KK KKKGG+G
Subjt: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
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| A0A5A7TU93 Gag/pol protein | 3.7e-47 | 48.97 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
M+S+ + +L +KL G+NYA+WK+ +N +L+I+DLRFVL+EECP P NA++TVR+ Y+RW KANEKAR YILA+ L ++ ++
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
Query: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
+ +H+A+KY+YNARM EG SVREHVL+MMV FNVAEMNGAVIDE S QTF+SLMK KG
Subjt: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
Query: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
QK GEANVA S ++F +GS+SGTKS PSSSG KK KKKGG+G
Subjt: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
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| A0A5D3BM47 Gag/pol protein | 1.2e-50 | 58.02 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHGLPPGDVWTTVH-----------
MSSSIIALLK E L G+NYA WKS LN+ILVI DLRF+LMEECPP P +NAS+++RDAY+R TKAN+KA +YILA+ D+ + H
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHGLPPGDVWTTVH-----------
Query: -----------SNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQSQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTK
+ EAIKYVYNA MKEGQSVREH LDM+V FNVAEMNGAVIDE+SQ+ KGQK+GEANVAH +RF APSSSG++
Subjt: -----------SNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQSQTFQSLMKNKGQKEGEANVAHSKRFQKGSSSGTKSAPSSSGTK
Query: KIHKKKGGKGKG
KI K+KG KGKG
Subjt: KIHKKKGGKGKG
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| A0A5D3CPJ6 Gag/pol protein | 3.7e-47 | 48.97 | Show/hide |
Query: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
M+S+ + +L +KL G+NYA+WK+ +N +L+I+DLRFVL+EECP P NA++TVR+ Y+RW KANEKAR YILA+ L ++ ++
Subjt: MSSSIIALLKNEKLIGDNYATWKSNLNIILVINDLRFVLMEECPPSPVRNASQTVRDAYDRWTKANEKARVYILANHG----------LPPGDVWTTV--
Query: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
+ +H+A+KY+YNARM EG SVREHVL+MMV FNVAEMNGAVIDE S QTF+SLMK KG
Subjt: ------HSNRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAEMNGAVIDEQS------------------------------------QTFQSLMKNKG
Query: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
QK GEANVA S ++F +GS+SGTKS PSSSG KK KKKGG+G
Subjt: QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIHKKKGGKG
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