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PI0015911 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015911
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr03:12361889..12362667
RNA-Seq ExpressionPI0015911
SyntenyPI0015911
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033006.1 hypothetical protein E6C27_scaffold269G001010 [Cucumis melo var. makuwa]5.3e-1654.81Show/hide
Query:  PLKISEPSLDTSKKQTAGHPEPSQWIGEKK-NKAIDRKELKIAKL-----------------QDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNF
        P KI EPSLDTSK+Q  GH EPSQW+GEK  +    +  L IAK+                 +D+VNTLEST  ITEEA E L TV KSM+VA EEFKNF
Subjt:  PLKISEPSLDTSKKQTAGHPEPSQWIGEKK-NKAIDRKELKIAKL-----------------QDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNF

Query:  KWRL
        KW+L
Subjt:  KWRL

KAA0041806.1 hypothetical protein E6C27_scaffold67G001790 [Cucumis melo var. makuwa]6.7e-1959.78Show/hide
Query:  VVHNYTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL
        ++ ++ PLKIS+  LDTSKKQ  GH EPSQWIGEK     DRK+L++AKL DE+N LEST  I +E  E LA VRKS+K   E FKNFKW+L
Subjt:  VVHNYTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL

KAA0043323.1 hypothetical protein E6C27_scaffold110G002340 [Cucumis melo var. makuwa]3.0e-1963.44Show/hide
Query:  ISEPSLDTSKKQTAGHPEPSQWIGEK----------KNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL
        +SE  L  S KQT  +PEPSQWIGEK           ++AID++EL++AKLQDEVNTLEST  ITEEA E LATVR+SM+ A EEFKNFKWRL
Subjt:  ISEPSLDTSKKQTAGHPEPSQWIGEK----------KNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL

KAA0053733.1 hypothetical protein E6C27_scaffold135G001100 [Cucumis melo var. makuwa]2.7e-1254.12Show/hide
Query:  LKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL
        L +    L+   +      E    +  +K +AID++EL++AKLQDEVNTLEST  ITEEA E LATVR+SM+ A EEFKNFKWRL
Subjt:  LKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL

TYJ98326.1 hypothetical protein E5676_scaffold232G00500 [Cucumis melo var. makuwa]1.8e-1662.35Show/hide
Query:  YTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFK
        YTPLKISEP LDTSK+QT G+PEPSQW+GEK                DEV+TLEST  ITEEA + LATV K+M+ A EEFKNFK
Subjt:  YTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFK

TrEMBL top hitse value%identityAlignment
A0A5A7TIH8 Uncharacterized protein3.2e-1959.78Show/hide
Query:  VVHNYTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL
        ++ ++ PLKIS+  LDTSKKQ  GH EPSQWIGEK     DRK+L++AKL DE+N LEST  I +E  E LA VRKS+K   E FKNFKW+L
Subjt:  VVHNYTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL

A0A5A7TIV2 Uncharacterized protein1.5e-1963.44Show/hide
Query:  ISEPSLDTSKKQTAGHPEPSQWIGEK----------KNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL
        +SE  L  S KQT  +PEPSQWIGEK           ++AID++EL++AKLQDEVNTLEST  ITEEA E LATVR+SM+ A EEFKNFKWRL
Subjt:  ISEPSLDTSKKQTAGHPEPSQWIGEK----------KNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL

A0A5A7UCU7 Uncharacterized protein1.3e-1254.12Show/hide
Query:  LKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL
        L +    L+   +      E    +  +K +AID++EL++AKLQDEVNTLEST  ITEEA E LATVR+SM+ A EEFKNFKWRL
Subjt:  LKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFKWRL

A0A5D3BH15 Uncharacterized protein8.8e-1762.35Show/hide
Query:  YTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFK
        YTPLKISEP LDTSK+QT G+PEPSQW+GEK                DEV+TLEST  ITEEA + LATV K+M+ A EEFKNFK
Subjt:  YTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFK

A0A5D3BWF6 Uncharacterized protein2.6e-1654.81Show/hide
Query:  PLKISEPSLDTSKKQTAGHPEPSQWIGEKK-NKAIDRKELKIAKL-----------------QDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNF
        P KI EPSLDTSK+Q  GH EPSQW+GEK  +    +  L IAK+                 +D+VNTLEST  ITEEA E L TV KSM+VA EEFKNF
Subjt:  PLKISEPSLDTSKKQTAGHPEPSQWIGEKK-NKAIDRKELKIAKL-----------------QDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNF

Query:  KWRL
        KW+L
Subjt:  KWRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCGGATATTGGGGGATCAAAACTTTGAAGCACCGCAACGCTACGGTTGGGCACTGTGGCGTTGTGCATAACTATACTCCTCTCAAGATTTCTGAGCCGTCTTTAGA
CACTTCTAAGAAGCAGACAGCAGGACACCCTGAGCCTTCTCAATGGATTGGTGAAAAGAAAAATAAGGCCATAGATAGAAAAGAACTAAAAATTGCCAAGCTCCAAGACG
AAGTCAACACTCTTGAAAGCACCCTTGATATCACCGAAGAAGCCACCGAGACCCTAGCTACGGTTCGTAAGAGTATGAAAGTTGCACACGAAGAATTTAAGAACTTCAAG
TGGAGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGCGGATATTGGGGGATCAAAACTTTGAAGCACCGCAACGCTACGGTTGGGCACTGTGGCGTTGTGCATAACTATACTCCTCTCAAGATTTCTGAGCCGTCTTTAGA
CACTTCTAAGAAGCAGACAGCAGGACACCCTGAGCCTTCTCAATGGATTGGTGAAAAGAAAAATAAGGCCATAGATAGAAAAGAACTAAAAATTGCCAAGCTCCAAGACG
AAGTCAACACTCTTGAAAGCACCCTTGATATCACCGAAGAAGCCACCGAGACCCTAGCTACGGTTCGTAAGAGTATGAAAGTTGCACACGAAGAATTTAAGAACTTCAAG
TGGAGGCTTTGA
Protein sequenceShow/hide protein sequence
MRGYWGIKTLKHRNATVGHCGVVHNYTPLKISEPSLDTSKKQTAGHPEPSQWIGEKKNKAIDRKELKIAKLQDEVNTLESTLDITEEATETLATVRKSMKVAHEEFKNFK
WRL