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PI0015960 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0015960
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRibosomal protein-like protein
Genome locationchr07:19001676..19002449
RNA-Seq ExpressionPI0015960
SyntenyPI0015960
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011653828.1 uncharacterized protein LOC101209567 [Cucumis sativus]2.5e-6691.78Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS
        MEDSGSPA PNSLP+G+DNISPTVRS RKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFR+ISSGRG KDK LLETSRK+DATN+RLA LDLKLDS
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS

Query:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        KPGYAETFALGLASGSVLNG GTVMPHVF ALTNIWSSVTNLTKHS
Subjt:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

XP_016899843.1 PREDICTED: uncharacterized protein LOC103487537 [Cucumis melo]4.5e-6893.15Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS
        MEDSGSPAPPNSLPQ + NISP VRSRRKPPSPQELISHYESQG TSHDASIKVIDDLQNALF++ISSGRGKKDKLLLETSRKIDATN+RLA LDLKLDS
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS

Query:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        KPGYAETFALGLASGSVLNG+GTVMPHVFGALTNIWSSVTNLTKHS
Subjt:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

XP_022955496.1 uncharacterized protein LOC111457504 [Cucurbita moschata]5.7e-5578Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRS----RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDL
        M DS SPA  NSLPQ  +  +P   S    RRK PSPQEL+SHYESQGLTSHDASIKVI+DLQNAL R+ISSGRGKKDKLL++TSRKIDATN RLA LDL
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRS----RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        KLDSKPGYA+TFALGLASGSVLNGIG VMPHVFGA+ NIWSSV+  TKHS
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

XP_022980748.1 uncharacterized protein LOC111480022 [Cucurbita maxima]2.6e-5579.19Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRS---RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLK
        M DS SPA  NSLPQ  +  +P   S   RRK PSPQEL+SHYESQGLTSHDASIKVI+DLQNAL R+ISSGRGKKDKLL++TSRKIDATN RLA LDLK
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRS---RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        LDSKPGYA+TFALGLASGSVLNGIG VMPHVFGAL NIWSSV+  TKHS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

XP_038893730.1 uncharacterized protein LOC120082569 [Benincasa hispida]4.5e-6084.56Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRS---RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLK
        M +S S APPNSLPQ     +P   S   RRKPPSPQELISHYESQGLTSHDASIKVI+DLQNALFR+ISSGRGKKDKLL+ETSRKIDATNNRLA LDLK
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRS---RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        LDSKPGYAE+FALGLASGSVL+GIGTVMPHVFGALTNIWSSV+NLTKHS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

TrEMBL top hitse value%identityAlignment
A0A0A0L3B6 Uncharacterized protein1.2e-6691.78Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS
        MEDSGSPA PNSLP+G+DNISPTVRS RKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFR+ISSGRG KDK LLETSRK+DATN+RLA LDLKLDS
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS

Query:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        KPGYAETFALGLASGSVLNG GTVMPHVF ALTNIWSSVTNLTKHS
Subjt:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

A0A1S4DV46 uncharacterized protein LOC1034875372.2e-6893.15Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS
        MEDSGSPAPPNSLPQ + NISP VRSRRKPPSPQELISHYESQG TSHDASIKVIDDLQNALF++ISSGRGKKDKLLLETSRKIDATN+RLA LDLKLDS
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS

Query:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        KPGYAETFALGLASGSVLNG+GTVMPHVFGALTNIWSSVTNLTKHS
Subjt:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

A0A5A7VAF7 Putative ribosomal-like protein2.2e-6893.15Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS
        MEDSGSPAPPNSLPQ + NISP VRSRRKPPSPQELISHYESQG TSHDASIKVIDDLQNALF++ISSGRGKKDKLLLETSRKIDATN+RLA LDLKLDS
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDS

Query:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        KPGYAETFALGLASGSVLNG+GTVMPHVFGALTNIWSSVTNLTKHS
Subjt:  KPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

A0A6J1GTX5 uncharacterized protein LOC1114575042.8e-5578Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRS----RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDL
        M DS SPA  NSLPQ  +  +P   S    RRK PSPQEL+SHYESQGLTSHDASIKVI+DLQNAL R+ISSGRGKKDKLL++TSRKIDATN RLA LDL
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRS----RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDL

Query:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        KLDSKPGYA+TFALGLASGSVLNGIG VMPHVFGA+ NIWSSV+  TKHS
Subjt:  KLDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

A0A6J1J075 uncharacterized protein LOC1114800221.2e-5579.19Show/hide
Query:  MEDSGSPAPPNSLPQGRDNISPTVRS---RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLK
        M DS SPA  NSLPQ  +  +P   S   RRK PSPQEL+SHYESQGLTSHDASIKVI+DLQNAL R+ISSGRGKKDKLL++TSRKIDATN RLA LDLK
Subjt:  MEDSGSPAPPNSLPQGRDNISPTVRS---RRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLK

Query:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS
        LDSKPGYA+TFALGLASGSVLNGIG VMPHVFGAL NIWSSV+  TKHS
Subjt:  LDSKPGYAETFALGLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16790.1 ribosomal protein-related3.6e-3155.56Show/hide
Query:  PAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGR--GKKDKLLLETSRKIDATNNRLAFLDLKLDSKPGY
        PA PN+  + +   S   +  +K P+P ELISHY+ +GL   +ASIKVI+DLQNAL RV+SS R    KDKL+ + +RKIDA N RLA +D KL++KPGY
Subjt:  PAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGR--GKKDKLLLETSRKIDATNNRLAFLDLKLDSKPGY

Query:  AETFALGLASGSVLNGIGTVMPHVFGALTNIWSSV
         ETFALGLASG+ LNGI  V PHV   +  IWS+V
Subjt:  AETFALGLASGSVLNGIGTVMPHVFGALTNIWSSV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATTCAGGTTCACCAGCGCCTCCAAATTCTCTCCCCCAAGGCCGAGACAACATTTCTCCAACAGTAAGAAGTAGAAGAAAGCCTCCTTCCCCACAGGAACTCAT
ATCCCACTACGAATCCCAAGGCCTTACTTCTCATGATGCTTCAATCAAGGTAATTGACGACCTTCAGAATGCTCTCTTCAGAGTCATCTCCTCCGGCAGAGGCAAAAAGG
ACAAGCTTCTGCTCGAGACCTCCAGGAAAATCGATGCTACCAATAATCGTCTTGCCTTTCTCGACCTGAAGTTGGATTCCAAGCCAGGTTATGCCGAGACTTTTGCCCTA
GGTTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGGACTGTGATGCCCCATGTTTTTGGGGCTCTCACCAATATTTGGAGTTCTGTTACTAATCTTACTAAGCATTCTTG
A
mRNA sequenceShow/hide mRNA sequence
GGATGTTTCCACGTTTATCCGTTGTCCGACCTTTTTTTCCCCATTAGCCATTATCTCAAAATTTGGGTGCAGCAATGGAGGATTCAGGTTCACCAGCGCCTCCAAATTCT
CTCCCCCAAGGCCGAGACAACATTTCTCCAACAGTAAGAAGTAGAAGAAAGCCTCCTTCCCCACAGGAACTCATATCCCACTACGAATCCCAAGGCCTTACTTCTCATGA
TGCTTCAATCAAGGTAATTGACGACCTTCAGAATGCTCTCTTCAGAGTCATCTCCTCCGGCAGAGGCAAAAAGGACAAGCTTCTGCTCGAGACCTCCAGGAAAATCGATG
CTACCAATAATCGTCTTGCCTTTCTCGACCTGAAGTTGGATTCCAAGCCAGGTTATGCCGAGACTTTTGCCCTAGGTTTGGCTTCTGGGTCTGTTTTGAATGGGATTGGG
ACTGTGATGCCCCATGTTTTTGGGGCTCTCACCAATATTTGGAGTTCTGTTACTAATCTTACTAAGCATTCTTGAATTTTGATTGATACAAAACTAGTCTTCGCTTTTGT
GGTTTTGTTTTTCTATTTAGTTAGTTCAGGTGGTTGATAGTTGTTGTTGTTGGTTAGATACTCAGGAAATATTTGAGTTTGAGCTATGCCTTTTCTTTTCCCCCTTCTTG
GATTGGTCTTTGATGACTCACATTTCACTTCGAACAATGATTTTTCGAATTTCATGTAGGGTTCTTCCTCCTCCATAACAAGTCAATAAAGTTAATTAAAAAGAAATGAT
AAAA
Protein sequenceShow/hide protein sequence
MEDSGSPAPPNSLPQGRDNISPTVRSRRKPPSPQELISHYESQGLTSHDASIKVIDDLQNALFRVISSGRGKKDKLLLETSRKIDATNNRLAFLDLKLDSKPGYAETFAL
GLASGSVLNGIGTVMPHVFGALTNIWSSVTNLTKHS