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PI0016003 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016003
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr06:10618795..10619574
RNA-Seq ExpressionPI0016003
SyntenyPI0016003
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]9.2e-5655.04Show/hide
Query:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------
        MA+PE     L  SENSKT + AT ++   LV K SPQRV GTKPI TFEI HFC DNLI+DLRR+TAITL E+LRQKII T                  
Subjt:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------

Query:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS
                                                 QL E K FVKTL+LDEN I KE  T + RL RLS KEAKLEAKLKVVR +S KLS +IS
Subjt:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS

Query:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP
        KN++ L QKQ EI KTCEEIDKLKCA I+GDADAKMLSALRE LENT EELKN KWTP
Subjt:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP

KAA0060137.1 uncharacterized protein E6C27_scaffold39G00580 [Cucumis melo var. makuwa]2.1e-3673.5Show/hide
Query:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR
        QL EAK FVKTL+LDEN I +E  T + RL RLS KEAKLEAKLKVVR +S KLSD+ISKN++ L QKQHEI KTCEEIDK +CAPI+ D DAKMLSALR
Subjt:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR

Query:  ECLENTREELKNFKWTP
        E L+NT EELKN KWTP
Subjt:  ECLENTREELKNFKWTP

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]4.6e-5554.65Show/hide
Query:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------
        MA+PE     L  SENSKT + AT ++   LV K SPQRV GTKPI TFEI HFC DNLI+DLRR+TAITL E+LRQKII T                  
Subjt:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------

Query:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS
                                                 QL E K FVKTL+LDEN I KE  T + RL RLS KEAKLEAKLKVVR +S KLS +IS
Subjt:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS

Query:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP
        KN++ L QKQ EI KTCEEIDKLKCA I+GDADAKML ALRE LENT EELKN KWTP
Subjt:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP

XP_016903650.1 PREDICTED: uncharacterized protein LOC103504169 [Cucumis melo]1.8e-3571.79Show/hide
Query:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR
        QL EAK FVKTL++DEN I +E  T +  L RLS KEAKLEAKLK VR +  KLS +ISKN++ L QKQHEI KTCEEIDKL+CAPI+GD DAKMLSALR
Subjt:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR

Query:  ECLENTREELKNFKWTP
        E LENT EELKN KWTP
Subjt:  ECLENTREELKNFKWTP

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]6.6e-5451.94Show/hide
Query:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------
        M N E  +  L+++ NSK  + A  V+    V K  PQ+V+GT+PI   EI HFCAD+LI+DLRRQ AITLWENLRQKII T                  
Subjt:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------

Query:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS
                                                 QL EAK FVKTL++DEN I  E  T K RL RLS KEAKLEAKLK+VRA+S KLS +I 
Subjt:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS

Query:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP
        KND+ L QKQHEI KTCEEIDKL+CAPIVGD DAKMLS LRE LE+T EELKNFKWTP
Subjt:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP

TrEMBL top hitse value%identityAlignment
A0A1S4E6N4 uncharacterized protein LOC1035041698.7e-3671.79Show/hide
Query:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR
        QL EAK FVKTL++DEN I +E  T +  L RLS KEAKLEAKLK VR +  KLS +ISKN++ L QKQHEI KTCEEIDKL+CAPI+GD DAKMLSALR
Subjt:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR

Query:  ECLENTREELKNFKWTP
        E LENT EELKN KWTP
Subjt:  ECLENTREELKNFKWTP

A0A5A7SJ85 Uncharacterized protein4.5e-5655.04Show/hide
Query:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------
        MA+PE     L  SENSKT + AT ++   LV K SPQRV GTKPI TFEI HFC DNLI+DLRR+TAITL E+LRQKII T                  
Subjt:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------

Query:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS
                                                 QL E K FVKTL+LDEN I KE  T + RL RLS KEAKLEAKLKVVR +S KLS +IS
Subjt:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS

Query:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP
        KN++ L QKQ EI KTCEEIDKLKCA I+GDADAKMLSALRE LENT EELKN KWTP
Subjt:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP

A0A5A7SWI5 Uncharacterized protein8.7e-3671.79Show/hide
Query:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR
        QL EAK FVKTL++DEN I +E  T +  L RLS KEAKLEAKLK VR +  KLS +ISKN++ L QKQHEI KTCEEIDKL+CAPI+GD DAKMLSALR
Subjt:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR

Query:  ECLENTREELKNFKWTP
        E LENT EELKN KWTP
Subjt:  ECLENTREELKNFKWTP

A0A5A7UZR8 Uncharacterized protein1.0e-3673.5Show/hide
Query:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR
        QL EAK FVKTL+LDEN I +E  T + RL RLS KEAKLEAKLKVVR +S KLSD+ISKN++ L QKQHEI KTCEEIDK +CAPI+ D DAKMLSALR
Subjt:  QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALR

Query:  ECLENTREELKNFKWTP
        E L+NT EELKN KWTP
Subjt:  ECLENTREELKNFKWTP

A0A5D3C453 Uncharacterized protein2.2e-5554.65Show/hide
Query:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------
        MA+PE     L  SENSKT + AT ++   LV K SPQRV GTKPI TFEI HFC DNLI+DLRR+TAITL E+LRQKII T                  
Subjt:  MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYT------------------

Query:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS
                                                 QL E K FVKTL+LDEN I KE  T + RL RLS KEAKLEAKLKVVR +S KLS +IS
Subjt:  -----------------------------------------QLKEAKDFVKTLQLDENHISKEAGTFKHRLVRLSTKEAKLEAKLKVVRAKSNKLSDLIS

Query:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP
        KN++ L QKQ EI KTCEEIDKLKCA I+GDADAKML ALRE LENT EELKN KWTP
Subjt:  KNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAACCCAGAAAGCTATGACGCTGCACTTACTCATAGTGAGAACTCCAAGACATTTGTAAGTGCAACTACCGTGACGACTAGTTCTCTTGTGTTCAAGGAGTCCCC
TCAACGGGTGAAAGGAACAAAGCCTATTGAAACTTTTGAGATTTTCCATTTTTGCGCAGACAACTTAATTACTGATCTCCGACGACAGACTGCCATAACCTTGTGGGAAA
ACCTACGACAAAAGATCATTTATACTCAGCTAAAGGAGGCGAAAGATTTTGTGAAGACGTTGCAACTTGATGAGAACCATATATCAAAGGAGGCAGGCACCTTCAAACAT
CGACTTGTACGATTATCCACCAAGGAAGCTAAACTTGAAGCAAAACTTAAAGTCGTACGTGCAAAGTCCAACAAACTTTCTGACCTAATTTCCAAGAATGACATGGTGCT
GAATCAGAAACAACATGAGATTTTAAAGACTTGCGAGGAAATTGACAAACTCAAATGTGCTCCTATCGTTGGTGATGCAGATGCTAAAATGTTGTCAGCACTTCGTGAAT
GTTTAGAAAACACGCGAGAGGAGCTGAAGAACTTTAAGTGGACTCCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAACCCAGAAAGCTATGACGCTGCACTTACTCATAGTGAGAACTCCAAGACATTTGTAAGTGCAACTACCGTGACGACTAGTTCTCTTGTGTTCAAGGAGTCCCC
TCAACGGGTGAAAGGAACAAAGCCTATTGAAACTTTTGAGATTTTCCATTTTTGCGCAGACAACTTAATTACTGATCTCCGACGACAGACTGCCATAACCTTGTGGGAAA
ACCTACGACAAAAGATCATTTATACTCAGCTAAAGGAGGCGAAAGATTTTGTGAAGACGTTGCAACTTGATGAGAACCATATATCAAAGGAGGCAGGCACCTTCAAACAT
CGACTTGTACGATTATCCACCAAGGAAGCTAAACTTGAAGCAAAACTTAAAGTCGTACGTGCAAAGTCCAACAAACTTTCTGACCTAATTTCCAAGAATGACATGGTGCT
GAATCAGAAACAACATGAGATTTTAAAGACTTGCGAGGAAATTGACAAACTCAAATGTGCTCCTATCGTTGGTGATGCAGATGCTAAAATGTTGTCAGCACTTCGTGAAT
GTTTAGAAAACACGCGAGAGGAGCTGAAGAACTTTAAGTGGACTCCCTAA
Protein sequenceShow/hide protein sequence
MANPESYDAALTHSENSKTFVSATTVTTSSLVFKESPQRVKGTKPIETFEIFHFCADNLITDLRRQTAITLWENLRQKIIYTQLKEAKDFVKTLQLDENHISKEAGTFKH
RLVRLSTKEAKLEAKLKVVRAKSNKLSDLISKNDMVLNQKQHEILKTCEEIDKLKCAPIVGDADAKMLSALRECLENTREELKNFKWTP