CuGenDBv2

Gene ID	PI0016020
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Rubredoxin-like domain-containing protein
Genome location	chr02:25154648..25155833
RNA-Seq Expression	PI0016020
Synteny	PI0016020
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component) GO:0005506 - iron ion binding (molecular function)
InterPro domains	IPR024934 - Rubredoxin-like domain IPR024935 - Rubredoxin domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004138023.1 uncharacterized protein LOC101207574 isoform X1 [Cucumis sativus]

4.9e-76

87.79

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS+SASSLSFHLPPKPH KLNQEDGGTDRNSMFLDSAS RLSLKSSFISPL               ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        PDKYFCPVCGAPKRRFRPYEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

XP_008464376.1 PREDICTED: uncharacterized protein LOC103502280 isoform X1 [Cucumis melo]

7.5e-77

88.95

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASVSASSLSFHLPPKPH KLNQEDGGTDRNSMFLDSAS RLSLKSSFISPL               ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        PDKYFCPVCGAPKRRFRPYEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

XP_022921625.1 uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]

1.7e-68

81.98

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL-------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLP
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SAS R SLKSSFISPL              A+PKFSMRVASKQAYICRDCGYIYNDRTPF+KLP
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL-------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAALGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPI AAA+GIVALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPI-AAALGIVALVGLYLYLNSVF

XP_022987160.1 uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]

5.2e-70

81.87

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPLP-------------ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLP
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SAS R SLKSSFISPLP             A+PKFS+RVASKQAYICRDCGYIYNDRTPF+KLP
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPLP-------------ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSV KNDNEFD RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

XP_023516579.1 uncharacterized protein LOC111780418 isoform X1 [Cucurbita pepo subsp. pepo]

2.0e-69

81.87

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL-------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLP
        MAS SASSLSFHLPP PH K+NQEDGG DR SM   SAS R SLKSSFISPL              A+PKFSMRVASKQAYICRDCGYIYNDRTPF+KLP
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL-------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSV KNDNEFDVRKARKAQIQKDEAIGKVLPIAAA+GI+ALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LNF5 Rubredoxin-like domain-containing protein

2.4e-76

87.79

Show/hide

Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MAS+SASSLSFHLPPKPH KLNQEDGGTDRNSMFLDSAS RLSLKSSFISPL               ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        PDKYFCPVCGAPKRRFRPYEQ+V+KNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNS F
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

A0A1S3CLS9 uncharacterized protein LOC103502280 isoform X1

3.6e-77

88.95

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASVSASSLSFHLPPKPH KLNQEDGGTDRNSMFLDSAS RLSLKSSFISPL               ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        PDKYFCPVCGAPKRRFRPYEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

A0A5A7UPF0 Rubredoxin family protein

3.6e-77

88.95

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASVSASSLSFHLPPKPH KLNQEDGGTDRNSMFLDSAS RLSLKSSFISPL               ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        PDKYFCPVCGAPKRRFRPYEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

A0A6J1JG21 uncharacterized protein LOC111484793 isoform X1

2.5e-70

81.87

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPLP-------------ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLP
        MAS SASSLSFHLPP PH K+NQEDGG DR+SM   SAS R SLKSSFISPLP             A+PKFS+RVASKQAYICRDCGYIYNDRTPF+KLP
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPLP-------------ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLP

Query:  DKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        D YFCPVCGAPKRRFRPYEQSV KNDNEFD RKARKAQIQKDEAIGKVLPIAAA+GIVALVGLYLYLNSVF
Subjt:  DKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

E5GBM0 Electron transporter

3.6e-77

88.95

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Query:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
        MASVSASSLSFHLPPKPH KLNQEDGGTDRNSMFLDSAS RLSLKSSFISPL               ASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL
Subjt:  MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPL--------------PASPKFSMRVASKQAYICRDCGYIYNDRTPFDKL

Query:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
        PDKYFCPVCGAPKRRFRPYEQ+VNKNDNEFD+RKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF
Subjt:  PDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

SwissProt top hits

e value

%identity

Alignment

O26258 Probable rubredoxin

2.1e-05

39.29

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Query:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPYE
        V++ + Y CR CGYIY+             TPF+ LP+ + CP CGA K+ F+P +
Subjt:  VASKQAYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPYE

P04170 Rubredoxin-1

1.9e-06

51.16

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Query:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRFRP
        Q Y+C  CGY Y    +D  PFD+LPD + CPVCG  K +F P
Subjt:  QAYICRDCGYIY----NDRTPFDKLPDKYFCPVCGAPKRRFRP

P24297 Rubredoxin

4.7e-05

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Query:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRPYE
        ++C+ CGYIY++            T F++LPD + CP+CGAPK  F   E
Subjt:  YICRDCGYIYND-----------RTPFDKLPDKYFCPVCGAPKRRFRPYE

P58992 Rubredoxin-1

1.0e-04

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Query:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPY
        +++C +CGYIY+              PFDKLPD + CPVC  PK +F  +
Subjt:  AYICRDCGYIYNDR-----------TPFDKLPDKYFCPVCGAPKRRFRPY

Q9AL94 Rubredoxin

4.0e-04

39.22

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Query:  YICRDCGYIY-----------NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQ
        Y+C  CGYIY           N  T F+ +PD + CP+CG  K +F P E+
Subjt:  YICRDCGYIY-----------NDRTPFDKLPDKYFCPVCGAPKRRFRPYEQ

Arabidopsis top hits

e value

%identity

Alignment

AT5G17170.1 rubredoxin family protein

8.4e-10

42.86

Show/hide

Query:  PASPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQSVNK
        PA P+F  ++   Q     +IC DCG+IY     FD+ PD Y CP C APK+RF  Y+ +  K
Subjt:  PASPKFSMRVASKQ----AYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQSVNK

AT5G51010.1 Rubredoxin-like superfamily protein

1.1e-41

64.34

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Query:  TDRNSMFLDSASKRLSLKSSFISPLPASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQ
        T + S FL   S RL      +S   ++P+FSMRV+SKQAYICRDCGYIYNDRTPFDKLPD YFCPVC APKRRFR Y   V+KN N+ DVRKARKA++Q
Subjt:  TDRNSMFLDSASKRLSLKSSFISPLPASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQSVNKNDNEFDVRKARKAQIQ

Query:  KDEAIGKVLPIAAALGIVALVGLYLYLNS
        +DEA+GK LPI  A+G++AL  LY Y+NS
Subjt:  KDEAIGKVLPIAAALGIVALVGLYLYLNS

Sequences

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CDS sequence

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ATGGCTTCCGTTTCAGCTTCTTCTCTCAGTTTCCACTTACCACCGAAGCCACATTGCAAGCTTAACCAGGAAGACGGCGGCACTGATAGGAACTCCATGTTTTTGGACTC
TGCCTCCAAACGCTTATCTTTGAAATCTTCCTTCATCTCTCCTTTACCTGCTTCTCCCAAGTTCTCCATGCGCGTCGCTTCCAAACAAGCCTATATCTGCCGTGATTGCG
GGTACATTTACAACGATAGAACTCCTTTTGACAAATTGCCTGATAAGTATTTCTGTCCTGTCTGTGGTGCTCCTAAGCGACGTTTTAGACCTTACGAGCAATCTGTGAAT
AAAAATGATAACGAATTTGATGTGAGGAAGGCGAGAAAGGCGCAGATCCAAAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCTGCTGCACTGGGAATCGTGGCACT
TGTAGGTTTATACTTGTACCTGAATAGCGTCTTCTAG

mRNA sequence

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Protein sequence

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MASVSASSLSFHLPPKPHCKLNQEDGGTDRNSMFLDSASKRLSLKSSFISPLPASPKFSMRVASKQAYICRDCGYIYNDRTPFDKLPDKYFCPVCGAPKRRFRPYEQSVN
KNDNEFDVRKARKAQIQKDEAIGKVLPIAAALGIVALVGLYLYLNSVF

PI0016020 (gene) of Melon (PI 482460) v1 genome