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PI0016034 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016034
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr03:17494462..17494730
RNA-Seq ExpressionPI0016034
SyntenyPI0016034
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033661.1 hypothetical protein E6C27_scaffold239G001280 [Cucumis melo var. makuwa]1.9e-2486.36Show/hide
Query:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSFTE+RPN +LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

KAA0044308.1 uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]6.7e-2587.88Show/hide
Query:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSFTEVRPN +LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

KGN51592.1 hypothetical protein Csa_008873 [Cucumis sativus]1.8e-2581.94Show/hide
Query:  MTATYYYWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        M AT+YYW E+SFTEVRPN +LL+EPGRPRTTRIQNEMDWKES QS+RCT+ K EGHNRRTCPQRA SSSRH
Subjt:  MTATYYYWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

TYK02543.1 uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]6.7e-2587.88Show/hide
Query:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSFTEVRPN +LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

XP_031737534.1 uncharacterized protein LOC116402427 [Cucumis sativus]7.9e-2686.15Show/hide
Query:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRASSSRH
        YWPE+SFTEVRPN +LL+ PGRPRTTRIQNEMDWKES QS+RCTICK EGHNRRTCP+RASSSRH
Subjt:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRASSSRH

TrEMBL top hitse value%identityAlignment
A0A0A0KT57 Uncharacterized protein8.5e-2681.94Show/hide
Query:  MTATYYYWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        M AT+YYW E+SFTEVRPN +LL+EPGRPRTTRIQNEMDWKES QS+RCT+ K EGHNRRTCPQRA SSSRH
Subjt:  MTATYYYWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

A0A5A7SW50 SWIM-type domain-containing protein9.4e-2586.36Show/hide
Query:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSFTE+RPN +LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

A0A5A7TN56 SWIM-type domain-containing protein3.2e-2587.88Show/hide
Query:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSFTEVRPN +LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

A0A5A7VDU8 SWIM-type domain-containing protein2.7e-2486.36Show/hide
Query:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSFTEVRPN NLL+ P RPRTTRI NEMDWKESGQS+RCTICK EGHNRR CPQRA SSSRH
Subjt:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

A0A5D3BS92 SWIM-type domain-containing protein3.2e-2587.88Show/hide
Query:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH
        YWPELSFTEVRPN +LL+ PGRPRTTRI NEMDWKESGQS+RCTICK EGHNRRTCPQRA SSSRH
Subjt:  YWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRA-SSSRH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTACTTATTACTACTGGCCAGAGTTATCATTCACTGAAGTTCGCCCAAATACGAACTTACTTAGAGAACCCGGTCGACCCAGAACTACGAGGATCCAGAATGA
AATGGATTGGAAGGAGTCCGGTCAATCAGTAAGATGCACGATATGTAAAGCGGAAGGACACAACAGACGTACTTGTCCACAACGTGCATCTTCTTCAAGACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTGCTACTTATTACTACTGGCCAGAGTTATCATTCACTGAAGTTCGCCCAAATACGAACTTACTTAGAGAACCCGGTCGACCCAGAACTACGAGGATCCAGAATGA
AATGGATTGGAAGGAGTCCGGTCAATCAGTAAGATGCACGATATGTAAAGCGGAAGGACACAACAGACGTACTTGTCCACAACGTGCATCTTCTTCAAGACATTGA
Protein sequenceShow/hide protein sequence
MTATYYYWPELSFTEVRPNTNLLREPGRPRTTRIQNEMDWKESGQSVRCTICKAEGHNRRTCPQRASSSRH