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PI0016047 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016047
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptiongag_pre-integrs domain-containing protein
Genome locationchr05:12564816..12565170
RNA-Seq ExpressionPI0016047
SyntenyPI0016047
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058944.1 hypothetical protein E6C27_scaffold98G001240 [Cucumis melo var. makuwa]8.1e-0880.95Show/hide
Query:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGA
        M SLQSHE RLKLFDSTPS+E FHMQSSSRG+ GGRRGG G+
Subjt:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGA

TXG68966.1 hypothetical protein EZV62_003901 [Acer yangbiense]5.4e-0447.14Show/hide
Query:  MRSLQSHEHRLKLFDSTPSEEAF----HMQSSSRGRFGGRRGGRGAETINLLQIEEGEEVQIEEEAEMMV
        M SLQSHE RLK FD+TP E+AF    +   SSRGR GGR GGR +E+ N     + E ++I ++  ++V
Subjt:  MRSLQSHEHRLKLFDSTPSEEAF----HMQSSSRGRFGGRRGGRGAETINLLQIEEGEEVQIEEEAEMMV

TYK10980.1 hypothetical protein E5676_scaffold874G00100 [Cucumis melo var. makuwa]8.1e-0880.95Show/hide
Query:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGA
        M SLQSHE RLKLFDSTPS+E FHMQSSSRG+ GGRRGG G+
Subjt:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGA

XP_038877452.1 uncharacterized protein LOC120069734 [Benincasa hispida]1.1e-2573.27Show/hide
Query:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRG--------------AETINLLQIEEGEEVQIEEEAEMMVVEIFLAYNVSIVDFMNIFKQ
        M SLQSHE RLKLFDS P E+AFHMQSSSRGR GGRR GRG              AETINLLQIEEGEEVQIE+EAE++VVEIFL YNVSIVD M+IFKQ
Subjt:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRG--------------AETINLLQIEEGEEVQIEEEAEMMVVEIFLAYNVSIVDFMNIFKQ

Query:  T
        T
Subjt:  T

XP_038904397.1 uncharacterized protein LOC120090760 [Benincasa hispida]6.4e-0553.03Show/hide
Query:  EEAFHMQSSSRGRFGGRRGGRGAETINLLQIEEGEEVQIEEEAEMMVVEIFLAYNVSIVDFMNIFK
        EE+ H+ + S     G      A+TI LLQIEE  +VQ+EEEAE+ VV+IFL YNVSIV+ M IF+
Subjt:  EEAFHMQSSSRGRFGGRRGGRGAETINLLQIEEGEEVQIEEEAEMMVVEIFLAYNVSIVDFMNIFK

TrEMBL top hitse value%identityAlignment
A0A5A7UV00 Uncharacterized protein3.9e-0880.95Show/hide
Query:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGA
        M SLQSHE RLKLFDSTPS+E FHMQSSSRG+ GGRRGG G+
Subjt:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGA

A0A5C7IKI5 gag_pre-integrs domain-containing protein2.6e-0447.14Show/hide
Query:  MRSLQSHEHRLKLFDSTPSEEAF----HMQSSSRGRFGGRRGGRGAETINLLQIEEGEEVQIEEEAEMMV
        M SLQSHE RLK FD+TP E+AF    +   SSRGR GGR GGR +E+ N     + E ++I ++  ++V
Subjt:  MRSLQSHEHRLKLFDSTPSEEAF----HMQSSSRGRFGGRRGGRGAETINLLQIEEGEEVQIEEEAEMMV

A0A5D3CHY9 Uncharacterized protein3.9e-0880.95Show/hide
Query:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGA
        M SLQSHE RLKLFDSTPS+E FHMQSSSRG+ GGRRGG G+
Subjt:  MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATCTCTTCAATCTCATGAGCACAGATTGAAGTTGTTTGATTCTACTCCTTCAGAAGAAGCTTTTCATATGCAATCCTCTTCTAGAGGGCGATTTGGTGGAAGAAG
AGGTGGACGTGGTGCAGAGACAATCAATCTTCTTCAAATAGAGGAAGGGGAAGAAGTTCAAATAGAGGAAGAGGCAGAAATGATGGTCGTGGAGATTTTTCTCGCATACA
ATGTTTCAATTGTAGACTTTATGAACATTTTCAAGCAGACTGTTGGTCTAAGAAGGCTAATTCTAATCAAGCAGAAACCACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATCTCTTCAATCTCATGAGCACAGATTGAAGTTGTTTGATTCTACTCCTTCAGAAGAAGCTTTTCATATGCAATCCTCTTCTAGAGGGCGATTTGGTGGAAGAAG
AGGTGGACGTGGTGCAGAGACAATCAATCTTCTTCAAATAGAGGAAGGGGAAGAAGTTCAAATAGAGGAAGAGGCAGAAATGATGGTCGTGGAGATTTTTCTCGCATACA
ATGTTTCAATTGTAGACTTTATGAACATTTTCAAGCAGACTGTTGGTCTAAGAAGGCTAATTCTAATCAAGCAGAAACCACTCTAA
Protein sequenceShow/hide protein sequence
MRSLQSHEHRLKLFDSTPSEEAFHMQSSSRGRFGGRRGGRGAETINLLQIEEGEEVQIEEEAEMMVVEIFLAYNVSIVDFMNIFKQTVGLRRLILIKQKPL