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PI0016082 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016082
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationchr12:23586737..23587255
RNA-Seq ExpressionPI0016082
SyntenyPI0016082
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067737.1 RING-H2 finger protein ATL39-like [Cucumis melo var. makuwa]3.8e-7077.46Show/hide
Query:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST
        MNSP AVSPTTMP PPPPP +LPV  LS LDLDFLN AGLSALA+M +YFIFTCYERK+WNRNGDIEGG                    +RPSS AVIST
Subjt:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST

Query:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        RLFQYGVGG  IGKNADCSICLDEFTEGEICRMLPKCKHVFHR+CIDQWLPNERNCPVCRSPVYV  VYSFPS
Subjt:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

KAE8653247.1 hypothetical protein Csa_019633 [Cucumis sativus]4.9e-7380.35Show/hide
Query:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST
        MNSP AVSPTTMPPPPPPP ELPVDVLSTLDLDFLNFAGLSALALM +YF+FTC ERKYWNRNGDIEGG                    +RPSS AVIST
Subjt:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST

Query:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        RLFQYGVGG  IGKNADCSICLDEFTEGEICRMLPKCKHVFHR+CID+WLPNERNCPVCRSPVYV  VYSFPS
Subjt:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

XP_004151031.2 RING-H2 finger protein ATL39 [Cucumis sativus]4.9e-7380.35Show/hide
Query:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST
        MNSP AVSPTTMPPPPPPP ELPVDVLSTLDLDFLNFAGLSALALM +YF+FTC ERKYWNRNGDIEGG                    +RPSS AVIST
Subjt:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST

Query:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        RLFQYGVGG  IGKNADCSICLDEFTEGEICRMLPKCKHVFHR+CID+WLPNERNCPVCRSPVYV  VYSFPS
Subjt:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

XP_008457570.2 PREDICTED: RING-H2 finger protein ATL39-like [Cucumis melo]1.3e-7078.03Show/hide
Query:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQ--------------------RPSSTAVIST
        MNSP AVSPTTMP PPPPP +LPV  LS LDLDFLN AGLSALA+M +YFIFTCYERK+WNRNGDIEGGQ                    RPSS AVIST
Subjt:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQ--------------------RPSSTAVIST

Query:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        RLFQYGVGG  IGKNADCSICLDEFTEGEICRMLPKCKHVFHR+CIDQWLPNERNCPVCRSPVYV  VYSFPS
Subjt:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

XP_038895799.1 E3 ubiquitin-protein ligase RING1-like [Benincasa hispida]4.4e-6677.78Show/hide
Query:  MPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQRPS---------------------STAVISTRLFQYGVGGR
        MPPPPP PAEL VDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG+ PS                     STAVIST+LFQYG GG 
Subjt:  MPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQRPS---------------------STAVISTRLFQYGVGGR

Query:  IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        +GKNADCSICLDEF+EGEICRMLPKCKHVFHR+CIDQWLPNER+CPVCRSPV+V  VYS PS
Subjt:  IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

TrEMBL top hitse value%identityAlignment
A0A0A0M0H1 RING-type E3 ubiquitin transferase2.3e-7380.35Show/hide
Query:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST
        MNSP AVSPTTMPPPPPPP ELPVDVLSTLDLDFLNFAGLSALALM +YF+FTC ERKYWNRNGDIEGG                    +RPSS AVIST
Subjt:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST

Query:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        RLFQYGVGG  IGKNADCSICLDEFTEGEICRMLPKCKHVFHR+CID+WLPNERNCPVCRSPVYV  VYSFPS
Subjt:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

A0A1S3C5T1 RING-H2 finger protein ATL39-like6.4e-7178.03Show/hide
Query:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQ--------------------RPSSTAVIST
        MNSP AVSPTTMP PPPPP +LPV  LS LDLDFLN AGLSALA+M +YFIFTCYERK+WNRNGDIEGGQ                    RPSS AVIST
Subjt:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQ--------------------RPSSTAVIST

Query:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        RLFQYGVGG  IGKNADCSICLDEFTEGEICRMLPKCKHVFHR+CIDQWLPNERNCPVCRSPVYV  VYSFPS
Subjt:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

A0A5A7VKM2 RING-H2 finger protein ATL39-like1.9e-7077.46Show/hide
Query:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST
        MNSP AVSPTTMP PPPPP +LPV  LS LDLDFLN AGLSALA+M +YFIFTCYERK+WNRNGDIEGG                    +RPSS AVIST
Subjt:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG--------------------QRPSSTAVIST

Query:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        RLFQYGVGG  IGKNADCSICLDEFTEGEICRMLPKCKHVFHR+CIDQWLPNERNCPVCRSPVYV  VYSFPS
Subjt:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

A0A5D3BEF0 RING-H2 finger protein ATL39-like6.4e-7178.03Show/hide
Query:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQ--------------------RPSSTAVIST
        MNSP AVSPTTMP PPPPP +LPV  LS LDLDFLN AGLSALA+M +YFIFTCYERK+WNRNGDIEGGQ                    RPSS AVIST
Subjt:  MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQ--------------------RPSSTAVIST

Query:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        RLFQYGVGG  IGKNADCSICLDEFTEGEICRMLPKCKHVFHR+CIDQWLPNERNCPVCRSPVYV  VYSFPS
Subjt:  RLFQYGVGGR-IGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

A0A6J1HLQ2 RING-type E3 ubiquitin transferase2.2e-5571.23Show/hide
Query:  PPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQ---------RPSSTAVISTRLFQYGVGGRIGKNADCSICLDEFTE
        PPP  EL VDVLST+DLDFLNFAGL  LA+ I+YFI+T YE KYWNR+ DIEGG+         R  +TAVISTRLFQYG  G +GKNADCSICLDEF E
Subjt:  PPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQ---------RPSSTAVISTRLFQYGVGGRIGKNADCSICLDEFTE

Query:  GEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS
        GEICRMLPKCKHVFHR+CIDQWLPNER+CP+CRSPV+V F+++  S
Subjt:  GEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS

SwissProt top hitse value%identityAlignment
Q7XLY8 E3 ubiquitin-protein ligase Os04g05909005.3e-1442.65Show/hide
Query:  TAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPV
        T +    + +Y  G       DCS+CL EF++GE  R+LP+C H FH+ CID WL +  NCP+CR+ +
Subjt:  TAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPV

Q9LF64 RING-H2 finger protein ATL528.2e-1533.11Show/hide
Query:  PPPPPAELPVDVLSTLDLDF----LNFAGL--SALALMIVYFIFTCY----------ERKYWNRNGD---------IEGGQRPSSTAVISTRLFQYGVGG
        PPPPP+    D  S+    F    +   G+  SAL L+  Y + + Y          E    N NG+            G   + + + S  +++Y  G 
Subjt:  PPPPPAELPVDVLSTLDLDF----LNFAGL--SALALMIVYFIFTCY----------ERKYWNRNGD---------IEGGQRPSSTAVISTRLFQYGVGG

Query:  RIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRS
             +DCS+CL EF E E  R+LPKC H FH  CID WL +  NCP+CR+
Subjt:  RIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRS

Q9LX93 E3 ubiquitin-protein ligase RING18.2e-1531.21Show/hide
Query:  PPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG-----------------------QRPS----STAVISTRLFQY
        PPPPPPP EL + + +++ +      G   L L +V+F++    ++       +  G                       Q P+     +A+ S  +  +
Subjt:  PPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG-----------------------QRPS----STAVISTRLFQY

Query:  GVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPV
          G  I    +CS+CL+EF E E  R+LPKC H FH  CID WL + +NCP+CR+PV
Subjt:  GVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPV

Q9M0C3 RING-H2 finger protein ATL142.4e-1431.58Show/hide
Query:  AVSPTTMPPPPPPPA---ELPVDVLSTLDLDFLNF-AGLSALALMIVYFIFTCYERKYW----NRNGDIEGGQRPSSTAVISTRL------FQYGVGGRI
        ++S    P PPPP A    LP  +LS   +  +     ++A   ++    FT +   YW    N    +   +R   +  +S R       F+Y      
Subjt:  AVSPTTMPPPPPPPA---ELPVDVLSTLDLDFLNF-AGLSALALMIVYFIFTCYERKYW----NRNGDIEGGQRPSSTAVISTRL------FQYGVGGRI

Query:  GKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVY
            DC +C+D F +G+ CR LP+C HVFHR C+D WL     CP+CR  VY
Subjt:  GKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVY

Q9SRQ8 RING-H2 finger protein ATL514.1e-1442.47Show/hide
Query:  GGQRPSSTAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRS
        GG     + + S  +++Y       +++DCS+CL EF E E  R+LPKC H FH  CID WL +  NCP+CR+
Subjt:  GGQRPSSTAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRS

Arabidopsis top hitse value%identityAlignment
AT3G03550.1 RING/U-box superfamily protein2.9e-1542.47Show/hide
Query:  GGQRPSSTAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRS
        GG     + + S  +++Y       +++DCS+CL EF E E  R+LPKC H FH  CID WL +  NCP+CR+
Subjt:  GGQRPSSTAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRS

AT4G30370.1 RING/U-box superfamily protein1.7e-1531.58Show/hide
Query:  AVSPTTMPPPPPPPA---ELPVDVLSTLDLDFLNF-AGLSALALMIVYFIFTCYERKYW----NRNGDIEGGQRPSSTAVISTRL------FQYGVGGRI
        ++S    P PPPP A    LP  +LS   +  +     ++A   ++    FT +   YW    N    +   +R   +  +S R       F+Y      
Subjt:  AVSPTTMPPPPPPPA---ELPVDVLSTLDLDFLNF-AGLSALALMIVYFIFTCYERKYW----NRNGDIEGGQRPSSTAVISTRL------FQYGVGGRI

Query:  GKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVY
            DC +C+D F +G+ CR LP+C HVFHR C+D WL     CP+CR  VY
Subjt:  GKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVY

AT4G33565.1 RING/U-box superfamily protein1.6e-1850Show/hide
Query:  TAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPV
        T + S ++ QY     + +  DCS+CL EF E E  R+LPKCKH FH YCID WL +  NCP+CR+P+
Subjt:  TAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPV

AT5G10380.1 RING/U-box superfamily protein5.8e-1631.21Show/hide
Query:  PPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG-----------------------QRPS----STAVISTRLFQY
        PPPPPPP EL + + +++ +      G   L L +V+F++    ++       +  G                       Q P+     +A+ S  +  +
Subjt:  PPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGG-----------------------QRPS----STAVISTRLFQY

Query:  GVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPV
          G  I    +CS+CL+EF E E  R+LPKC H FH  CID WL + +NCP+CR+PV
Subjt:  GVGGRIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRSPV

AT5G17600.1 RING/U-box superfamily protein5.8e-1633.11Show/hide
Query:  PPPPPAELPVDVLSTLDLDF----LNFAGL--SALALMIVYFIFTCY----------ERKYWNRNGD---------IEGGQRPSSTAVISTRLFQYGVGG
        PPPPP+    D  S+    F    +   G+  SAL L+  Y + + Y          E    N NG+            G   + + + S  +++Y  G 
Subjt:  PPPPPAELPVDVLSTLDLDF----LNFAGL--SALALMIVYFIFTCY----------ERKYWNRNGD---------IEGGQRPSSTAVISTRLFQYGVGG

Query:  RIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRS
             +DCS+CL EF E E  R+LPKC H FH  CID WL +  NCP+CR+
Subjt:  RIGKNADCSICLDEFTEGEICRMLPKCKHVFHRYCIDQWLPNERNCPVCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTCCGAAGGCCGTATCTCCAACAACCATGCCTCCACCGCCTCCACCTCCGGCCGAGTTACCCGTCGACGTCCTCTCAACTCTAGATCTCGACTTCCTAAATTT
CGCAGGACTCTCCGCTCTGGCTTTGATGATCGTCTACTTCATTTTCACCTGCTACGAACGGAAATACTGGAACCGAAACGGCGATATCGAAGGCGGACAACGGCCGTCGT
CGACGGCAGTGATTTCGACGAGGCTGTTTCAGTACGGAGTGGGAGGGAGAATAGGGAAAAATGCGGATTGTTCGATTTGTTTGGATGAATTTACTGAAGGTGAGATTTGT
CGAATGCTTCCGAAATGCAAACATGTTTTTCATCGATATTGTATCGATCAATGGCTTCCCAATGAACGCAATTGCCCTGTTTGTCGTTCCCCTGTTTATGTTCATTTCGT
TTATTCATTTCCTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCTCCGAAGGCCGTATCTCCAACAACCATGCCTCCACCGCCTCCACCTCCGGCCGAGTTACCCGTCGACGTCCTCTCAACTCTAGATCTCGACTTCCTAAATTT
CGCAGGACTCTCCGCTCTGGCTTTGATGATCGTCTACTTCATTTTCACCTGCTACGAACGGAAATACTGGAACCGAAACGGCGATATCGAAGGCGGACAACGGCCGTCGT
CGACGGCAGTGATTTCGACGAGGCTGTTTCAGTACGGAGTGGGAGGGAGAATAGGGAAAAATGCGGATTGTTCGATTTGTTTGGATGAATTTACTGAAGGTGAGATTTGT
CGAATGCTTCCGAAATGCAAACATGTTTTTCATCGATATTGTATCGATCAATGGCTTCCCAATGAACGCAATTGCCCTGTTTGTCGTTCCCCTGTTTATGTTCATTTCGT
TTATTCATTTCCTTCTTGA
Protein sequenceShow/hide protein sequence
MNSPKAVSPTTMPPPPPPPAELPVDVLSTLDLDFLNFAGLSALALMIVYFIFTCYERKYWNRNGDIEGGQRPSSTAVISTRLFQYGVGGRIGKNADCSICLDEFTEGEIC
RMLPKCKHVFHRYCIDQWLPNERNCPVCRSPVYVHFVYSFPS