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PI0016097 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016097
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr04:24738791..24738988
RNA-Seq ExpressionPI0016097
SyntenyPI0016097
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047014.1 hypothetical protein E6C27_scaffold230G002160 [Cucumis melo var. makuwa]1.1e-0558.18Show/hide
Query:  RRGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        RRGRQVA  V  T  AN    S + SSNPH +  QN+EESMF+ FAQR+ DH MP
Subjt:  RRGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

KAA0054080.1 hypothetical protein E6C27_scaffold1371G00020 [Cucumis melo var. makuwa]3.4e-0764.71Show/hide
Query:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        QVA  V++ GSAN   G DE SSNPH    QN+EESMFN FAQRVADH++P
Subjt:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

KAE8646802.1 hypothetical protein Csa_005391, partial [Cucumis sativus]1.9e-0556.45Show/hide
Query:  MAPRGRPRRGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        +A RGR RRGRQV T V  TGS N     +E S NPH   EQN EESMF +FAQR+ +  MP
Subjt:  MAPRGRPRRGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

TYK27664.1 uncharacterized protein E5676_scaffold93G00280 [Cucumis melo var. makuwa]7.5e-0762.75Show/hide
Query:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        QVA  V++ GSAN   G DE SSNPH    QN+EESMFN FA+RVADH++P
Subjt:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

TYK27665.1 uncharacterized protein E5676_scaffold93G00290 [Cucumis melo var. makuwa]1.9e-0560.78Show/hide
Query:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        QV   V  T SAN   GS+E S NPH   EQN+EESMFN+F QRV DH MP
Subjt:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

TrEMBL top hitse value%identityAlignment
A0A5A7TFU7 Uncharacterized protein1.2e-0557.63Show/hide
Query:  GRPR-RGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        G PR    QV   V  T SAN   GS+E S NPH   E+N+EESMFNHF QRV DH MP
Subjt:  GRPR-RGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

A0A5A7TVM1 Uncharacterized protein5.3e-0658.18Show/hide
Query:  RRGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        RRGRQVA  V  T  AN    S + SSNPH +  QN+EESMF+ FAQR+ DH MP
Subjt:  RRGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

A0A5A7UFQ1 Uncharacterized protein1.6e-0764.71Show/hide
Query:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        QVA  V++ GSAN   G DE SSNPH    QN+EESMFN FAQRVADH++P
Subjt:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

A0A5D3DVY7 Uncharacterized protein3.6e-0762.75Show/hide
Query:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        QVA  V++ GSAN   G DE SSNPH    QN+EESMFN FA+RVADH++P
Subjt:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

A0A5D3DWI1 Uncharacterized protein9.0e-0660.78Show/hide
Query:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP
        QV   V  T SAN   GS+E S NPH   EQN+EESMFN+F QRV DH MP
Subjt:  QVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCGCGAGGAAGGCCAAGGCGAGGAAGGCAAGTAGCAACTGGTGTCCGAGCTACTGGGAGCGCTAATAGCGAGCTAGGATCGGATGAAAAGTCGAGTAATCCTCA
TGTTGCAAATGAACAAAACATAGAAGAAAGTATGTTCAACCATTTTGCTCAGAGAGTGGCGGACCACATTATGCCATCAACCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACCGCGAGGAAGGCCAAGGCGAGGAAGGCAAGTAGCAACTGGTGTCCGAGCTACTGGGAGCGCTAATAGCGAGCTAGGATCGGATGAAAAGTCGAGTAATCCTCA
TGTTGCAAATGAACAAAACATAGAAGAAAGTATGTTCAACCATTTTGCTCAGAGAGTGGCGGACCACATTATGCCATCAACCCTGTAG
Protein sequenceShow/hide protein sequence
MAPRGRPRRGRQVATGVRATGSANSELGSDEKSSNPHVANEQNIEESMFNHFAQRVADHIMPSTL