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PI0016108 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016108
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionAcetohydroxy-acid synthase small subunit
Genome locationchr10:7470488..7471223
RNA-Seq ExpressionPI0016108
SyntenyPI0016108
Gene Ontology termsGO:0009097 - isoleucine biosynthetic process (biological process)
GO:0009099 - valine biosynthetic process (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:1990610 - acetolactate synthase regulator activity (molecular function)
InterPro domainsIPR002912 - ACT domain
IPR004789 - Acetolactate synthase, small subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038202.1 acetolactate synthase small subunit 1 [Cucumis melo var. makuwa]1.1e-1884.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G    +GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

XP_008443657.1 PREDICTED: acetolactate synthase small subunit 1, chloroplastic-like [Cucumis melo]1.1e-1884.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G    +GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

XP_022149970.1 acetolactate synthase small subunit 1, chloroplastic-like isoform X1 [Momordica charantia]1.4e-1884.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G     GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

XP_038880022.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X1 [Benincasa hispida]1.1e-1884.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G    +GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

XP_038880023.1 acetolactate synthase small subunit 2, chloroplastic-like isoform X2 [Benincasa hispida]1.1e-1884.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G    +GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

TrEMBL top hitse value%identityAlignment
A0A0A0M018 Acetohydroxy-acid synthase small subunit6.7e-1984.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G     GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

A0A1S3B8L7 Acetohydroxy-acid synthase small subunit5.1e-1984.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G    +GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

A0A5A7T3Z5 Acetohydroxy-acid synthase small subunit5.1e-1984.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G    +GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

A0A6J1DA17 Acetohydroxy-acid synthase small subunit6.7e-1984.13Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        GHQSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G     GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

A0A6J1L3C2 Acetohydroxy-acid synthase small subunit1.3e-1782.54Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKGR----GLSRITTVIPGTDESIGKLV
        G QSHTLSMLVNDYPGVLNVV GIISRRGYNIQ +  G     GLSRITTVIPGTDESIGKLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKGR----GLSRITTVIPGTDESIGKLV

SwissProt top hitse value%identityAlignment
O78451 Acetolactate synthase small subunit2.8e-0644.83Show/hide
Query:  HTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKL
        HTLS+LV D  GVL  + G+ +RRG+NI+ +  G     G+SRIT V+P  + +I +L
Subjt:  HTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKL

Q93YZ7 Acetolactate synthase small subunit 2, chloroplastic6.6e-1665.08Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        G +SHTLS+LVND PGVLN+V G+ +RRGYNIQ +  G    +G+SRITTVIP TDES+ KLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

Q9FFF4 Acetolactate synthase small subunit 1, chloroplastic9.6e-1555.56Show/hide
Query:  WSPLLHRHNLPSSRSELIGHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        + P+L  H       +  G +SHTLS+LV + PGVLN++ G ISRRGYNIQ +  G     GLSRITTVIPGTDE+I KLV
Subjt:  WSPLLHRHNLPSSRSELIGHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

Q9SMC2 Acetolactate synthase small subunit 1, chloroplastic1.0e-1668.25Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        G +SHTLSMLVND PGVLN+V G+ +RRGYNIQ +  G     GLSRITTV+PGTDES+ KLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

Q9TLY1 Acetolactate synthase small subunit4.3e-0744.83Show/hide
Query:  HTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKL
        +TLS+LV D  GVL  + G+ +RRG+NI+ +  G    +G+SRIT V+PG D ++ +L
Subjt:  HTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKL

Arabidopsis top hitse value%identityAlignment
AT2G31810.1 ACT domain-containing small subunit of acetolactate synthase protein4.7e-1765.08Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        G +SHTLS+LVND PGVLN+V G+ +RRGYNIQ +  G    +G+SRITTVIP TDES+ KLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

AT2G31810.2 ACT domain-containing small subunit of acetolactate synthase protein1.8e-1664.06Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQ-----GIQKGRGLSRITTVIPGTDESIGKLV
        G +SHTLS+LVND PGVLN+V G+ +RRGYNIQ     G  + +G+SRITTVIP TDES+ KLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQ-----GIQKGRGLSRITTVIPGTDESIGKLV

AT2G31810.3 ACT domain-containing small subunit of acetolactate synthase protein4.7e-1765.08Show/hide
Query:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        G +SHTLS+LVND PGVLN+V G+ +RRGYNIQ +  G    +G+SRITTVIP TDES+ KLV
Subjt:  GHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

AT5G16290.1 VALINE-TOLERANT 16.8e-1655.56Show/hide
Query:  WSPLLHRHNLPSSRSELIGHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        + P+L  H       +  G +SHTLS+LV + PGVLN++ G ISRRGYNIQ +  G     GLSRITTVIPGTDE+I KLV
Subjt:  WSPLLHRHNLPSSRSELIGHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV

AT5G16290.2 VALINE-TOLERANT 16.8e-1655.56Show/hide
Query:  WSPLLHRHNLPSSRSELIGHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV
        + P+L  H       +  G +SHTLS+LV + PGVLN++ G ISRRGYNIQ +  G     GLSRITTVIPGTDE+I KLV
Subjt:  WSPLLHRHNLPSSRSELIGHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKG----RGLSRITTVIPGTDESIGKLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCACTGGTCACCACTACTCCATCGTCATAACCTACCTTCGTCGAGGTCGGAGTTAATTGGTCATCAATCACATACATTGTCCATGCTAGTAAATGACTATCCTGG
AGTTCTCAATGTTGTTATTGGGATCATTTCTAGAAGAGGCTATAATATTCAGGGCATACAGAAAGGTAGGGGATTATCTCGTATTACAACGGTCATTCCTGGAACTGATG
AATCAATTGGAAAGTTGGTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGCACTGGTCACCACTACTCCATCGTCATAACCTACCTTCGTCGAGGTCGGAGTTAATTGGTCATCAATCACATACATTGTCCATGCTAGTAAATGACTATCCTGG
AGTTCTCAATGTTGTTATTGGGATCATTTCTAGAAGAGGCTATAATATTCAGGGCATACAGAAAGGTAGGGGATTATCTCGTATTACAACGGTCATTCCTGGAACTGATG
AATCAATTGGAAAGTTGGTGTAG
Protein sequenceShow/hide protein sequence
MQHWSPLLHRHNLPSSRSELIGHQSHTLSMLVNDYPGVLNVVIGIISRRGYNIQGIQKGRGLSRITTVIPGTDESIGKLV