; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016109 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016109
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCold shock protein 2-like
Genome locationchr09:14590584..14591928
RNA-Seq ExpressionPI0016109
SyntenyPI0016109
Gene Ontology termsGO:0006952 - defense response (biological process)
GO:0007165 - signal transduction (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003953 - NAD+ nucleosidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0043531 - ADP binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR002059 - Cold-shock protein, DNA-binding
IPR011129 - Cold shock domain
IPR012340 - Nucleic acid-binding, OB-fold
IPR019844 - Cold-shock (CSD) domain
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51220.2 hypothetical protein Csa_008318 [Cucumis sativus]2.3e-8291.01Show/hide
Query:  KRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGGRGFG
        +RS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYD+DQRAKAVDVTVI RSTRYGGGRG GRGRGGSY RFGGGGRGFG
Subjt:  KRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGGRGFG

Query:  RGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK
        RG W EGPS GGGRGGGECYNCGRMGHLARDCYRGNG AP GRRYDGGRGY   GGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK

XP_004140332.1 cold shock protein 2 [Cucumis sativus]1.4e-8491.21Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYD+DQRAKAVDVTVI RSTRYGGGRG GRGRGGSY RFGGGG
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG

Query:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK
        RGFGRG W EGPS GGGRGGGECYNCGRMGHLARDCYRGNG AP GRRYDGGRGY   GGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK

XP_008465791.1 PREDICTED: cold shock protein 2-like [Cucumis melo]3.3e-8993.96Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG
        MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYD+DQRAKAVDVTVI RSTRYGGGRG GRGRGGSY RFGGGG
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG

Query:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK
        RGFGRG WY+GPSGGGGRGGGECYNCGRMGHLARDCYRGNG APPGRRY+GGRGY   GGGRGCYNCGDTGHFARDCQNESK
Subjt:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK

XP_022993723.1 cold shock protein 2-like [Cucurbita maxima]6.5e-7783.16Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGG--
        MAEVKRSSGTVRWFSAQKGFGFIAPDDA+DDLFVHQTSI+SEGFRTLFDGQ VEF IDYDEDQRAKAVDVTV GRS+ YGGGRG  RGRGG Y RFGG  
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGG--

Query:  --GGRGFGRGGW-YEGPS-----GGGGRGGGECYNCGRMGHLARDCYRGNGCAPP----GRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK
          GGRGFGRGG  Y+GPS     GGGGRGGGECYNCGRMGHLARDCYRGNG APP    GR Y GGRGY   GGGRGCYNCGDTGHFARDCQNESK
Subjt:  --GGRGFGRGGW-YEGPS-----GGGGRGGGECYNCGRMGHLARDCYRGNGCAPP----GRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK

XP_038906549.1 glycine-rich protein 2-like [Benincasa hispida]3.9e-8288.71Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG
        MAEVKRSSGTVRWFSAQKGFGFIAPDDAS+DLFVHQTSIRSEGFRTLFDGQ VEFTIDYDEDQR+KAVDVTVIGRST YGGGRG GRGRGG+Y RFGGGG
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG

Query:  RGFGRGGWYEGPSG-----GGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGR--GCYNCGDTGHFARDCQNESK
        RGFGRGG YE  SG     GGGRGGGECYNCGRMGHLARDCYRGNG APPGR Y GGRGYGGG   GCYNCGDTGHFARDCQNESK
Subjt:  RGFGRGGWYEGPSG-----GGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGR--GCYNCGDTGHFARDCQNESK

TrEMBL top hitse value%identityAlignment
A0A0A0KRF7 Uncharacterized protein7.0e-8591.21Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG
        MAE+KRS+GTVRWFSAQKGFGFIAPDDA+DDLFVHQTSIRSEGFRTLFDGQTVEFTIDYD+DQRAKAVDVTVI RSTRYGGGRG GRGRGGSY RFGGGG
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG

Query:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK
        RGFGRG W EGPS GGGRGGGECYNCGRMGHLARDCYRGNG AP GRRYDGGRGY   GGGRGCYNCGDTGH ARDCQNESK
Subjt:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK

A0A1S3CPN9 cold shock protein 2-like1.6e-8993.96Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG
        MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYD+DQRAKAVDVTVI RSTRYGGGRG GRGRGGSY RFGGGG
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG

Query:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK
        RGFGRG WY+GPSGGGGRGGGECYNCGRMGHLARDCYRGNG APPGRRY+GGRGY   GGGRGCYNCGDTGHFARDCQNESK
Subjt:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK

A0A5A7TX13 Cold shock protein 2-like1.6e-8993.96Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG
        MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYD+DQRAKAVDVTVI RSTRYGGGRG GRGRGGSY RFGGGG
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGG

Query:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK
        RGFGRG WY+GPSGGGGRGGGECYNCGRMGHLARDCYRGNG APPGRRY+GGRGY   GGGRGCYNCGDTGHFARDCQNESK
Subjt:  RGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK

A0A6J1FIQ9 cold shock protein 2-like5.4e-7782.32Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGG--
        MAEVKRSSGTVRWFSAQKGFGFIAPDDA+DDLFVHQTSI+SEGFRTLFDGQ VEF IDYDEDQRAKAVDVTV GRS+ YGGGRG  RGRGG Y RFGG  
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGG--

Query:  --GGRGFGRGGW-YEGPS-----GGGGRGGGECYNCGRMGHLARDCYRGNGCAPP----GRRYDGGRGY-----GGGRGCYNCGDTGHFARDCQNESK
          GGRGFGRGG  Y+GPS     GGGGRGGGECYNCGRMGHLARDCYRGNG APP    GR Y GGRGY     GGGRGCYNCGDTGHFARDCQNESK
Subjt:  --GGRGFGRGGW-YEGPS-----GGGGRGGGECYNCGRMGHLARDCYRGNGCAPP----GRRYDGGRGY-----GGGRGCYNCGDTGHFARDCQNESK

A0A6J1K351 cold shock protein 2-like3.2e-7783.16Show/hide
Query:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGG--
        MAEVKRSSGTVRWFSAQKGFGFIAPDDA+DDLFVHQTSI+SEGFRTLFDGQ VEF IDYDEDQRAKAVDVTV GRS+ YGGGRG  RGRGG Y RFGG  
Subjt:  MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGG--

Query:  --GGRGFGRGGW-YEGPS-----GGGGRGGGECYNCGRMGHLARDCYRGNGCAPP----GRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK
          GGRGFGRGG  Y+GPS     GGGGRGGGECYNCGRMGHLARDCYRGNG APP    GR Y GGRGY   GGGRGCYNCGDTGHFARDCQNESK
Subjt:  --GGRGFGRGGW-YEGPS-----GGGGRGGGECYNCGRMGHLARDCYRGNGCAPP----GRRYDGGRGY---GGGRGCYNCGDTGHFARDCQNESK

SwissProt top hitse value%identityAlignment
O65639 Cold shock protein 15.4e-2646.74Show/hide
Query:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRST--RYGGGRGDGRGRGGSYVRFGGGGRGF
        RS+G V WF+A KG+GFI PDD S +LFVHQ+SI SEG+R+L  G  VEF I    D + KAV+VT  G  +  +    RG+G  RGG     G G    
Subjt:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRST--RYGGGRGDGRGRGGSYVRFGGGGRGF

Query:  GRGGWYE-----GPSGGGG----RGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGRGCYNCGDTGHFARDCQNES
        G  G        G  GGGG    RGG  CYNCG  GH ARD      C   G     G   GG  GCY CGD GH ARDC  +S
Subjt:  GRGGWYE-----GPSGGGG----RGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGRGCYNCGDTGHFARDCQNES

P27484 Glycine-rich protein 25.2e-3750Show/hide
Query:  KRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVT----VIGRSTRYGGGRGDGR---GRGGSYVRFG
        +R+ GTV+WFS QKGFGFI PDD  +DLFVHQ+ IRSEGFR+L +G+TVEF ++   D R KAVDVT       +  R GGG G GR   G GG    +G
Subjt:  KRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVT----VIGRSTRYGGGRGDGR---GRGGSYVRFG

Query:  GGGR-----------GFGRGGWYEGPS---------------GGGGRGGGE-CYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGRGCYNCGDTGHF
        GGGR           G+G GG Y G S               GGGG GGG  C+ CG  GH ARDC +  G    G R+ GG G GGG GCY CG+ GHF
Subjt:  GGGR-----------GFGRGGWYEGPS---------------GGGGRGGGE-CYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGRGCYNCGDTGHF

Query:  ARDC
        AR+C
Subjt:  ARDC

Q38896 Cold shock domain-containing protein 42.7e-3352.43Show/hide
Query:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYG--GGRGDGRGRGGSYVRFGGGGRGF
        R  GTV+WF  QKGFGFI P D  DDLFVHQ+SIRSEGFR+L   ++VEF ++ D   R KA++V+    +   G  GG G   GRGG     GGGGRG 
Subjt:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYG--GGRGDGRGRGGSYVRFGGGGRGF

Query:  GRGGW-YEGPSGG---GGRGGG----ECYNCGRMGHLARDCYRGNG---CAPPGRRY---DGGRGYGGGRGCYNCGDTGHFARDC
        GRGG  Y G  GG   GGRGGG     C+ CG  GH+AR+C +G G       G RY    GG G GGG  CY+CG++GHFARDC
Subjt:  GRGGW-YEGPSGG---GGRGGG----ECYNCGRMGHLARDCYRGNG---CAPPGRRY---DGGRGYGGGRGCYNCGDTGHFARDC

Q41188 Cold shock protein 23.6e-3850Show/hide
Query:  KRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVT------VIGRS--------TRYGGGRGDGRGRG
        +R  G+V+WF  QKGFGFI PDD  DDLFVHQ+SIRSEGFR+L   + VEF ++ D + R KA+DV+      V G S          +GGGRG GRG G
Subjt:  KRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVT------VIGRS--------TRYGGGRGDGRGRG

Query:  GSYVRFGGGGRGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYR-GNGCAPPGRRYDGGRGYGGGRG---------------CYNCGDTGHFARDC
        G Y   GGGG G+       G  GGGGRGG +CY CG  GH+ARDC   G G    G  Y GG GYGGG G               CY+CG++GHFARDC
Subjt:  GSYVRFGGGGRGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYR-GNGCAPPGRRYDGGRGYGGGRG---------------CYNCGDTGHFARDC

Q94C69 Cold shock domain-containing protein 31.5e-2845.19Show/hide
Query:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIG--------RSTRYGGGR-------------G
        RS G V WFS  KG+GFI PDD  ++LFVHQ+SI S+GFR+L  G++VE+ I    D + KA++VT  G         S+R  GG               
Subjt:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIG--------RSTRYGGGR-------------G

Query:  DGRGRGGSYVRFGGGGRGFGRGGWY----------------EGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYG-GGRGCYNCGDT
        DG G GG     GGG R  G G  Y                 G SGGGG GG  CY+CG +GHLA+DC  G+G    G RY GG G G GG GCY CG  
Subjt:  DGRGRGGSYVRFGGGGRGFGRGGWY----------------EGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYG-GGRGCYNCGDT

Query:  GHFARDCQ
        GHFARDC+
Subjt:  GHFARDCQ

Arabidopsis top hitse value%identityAlignment
AT2G17870.1 cold shock domain protein 31.1e-2945.19Show/hide
Query:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIG--------RSTRYGGGR-------------G
        RS G V WFS  KG+GFI PDD  ++LFVHQ+SI S+GFR+L  G++VE+ I    D + KA++VT  G         S+R  GG               
Subjt:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIG--------RSTRYGGGR-------------G

Query:  DGRGRGGSYVRFGGGGRGFGRGGWY----------------EGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYG-GGRGCYNCGDT
        DG G GG     GGG R  G G  Y                 G SGGGG GG  CY+CG +GHLA+DC  G+G    G RY GG G G GG GCY CG  
Subjt:  DGRGRGGSYVRFGGGGRGFGRGGWY----------------EGPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYG-GGRGCYNCGDT

Query:  GHFARDCQ
        GHFARDC+
Subjt:  GHFARDCQ

AT2G21060.1 glycine-rich protein 2B1.9e-3452.43Show/hide
Query:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYG--GGRGDGRGRGGSYVRFGGGGRGF
        R  GTV+WF  QKGFGFI P D  DDLFVHQ+SIRSEGFR+L   ++VEF ++ D   R KA++V+    +   G  GG G   GRGG     GGGGRG 
Subjt:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYG--GGRGDGRGRGGSYVRFGGGGRGF

Query:  GRGGW-YEGPSGG---GGRGGG----ECYNCGRMGHLARDCYRGNG---CAPPGRRY---DGGRGYGGGRGCYNCGDTGHFARDC
        GRGG  Y G  GG   GGRGGG     C+ CG  GH+AR+C +G G       G RY    GG G GGG  CY+CG++GHFARDC
Subjt:  GRGGW-YEGPSGG---GGRGGG----ECYNCGRMGHLARDCYRGNG---CAPPGRRY---DGGRGYGGGRGCYNCGDTGHFARDC

AT4G36020.1 cold shock domain protein 13.9e-2746.74Show/hide
Query:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRST--RYGGGRGDGRGRGGSYVRFGGGGRGF
        RS+G V WF+A KG+GFI PDD S +LFVHQ+SI SEG+R+L  G  VEF I    D + KAV+VT  G  +  +    RG+G  RGG     G G    
Subjt:  RSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRST--RYGGGRGDGRGRGGSYVRFGGGGRGF

Query:  GRGGWYE-----GPSGGGG----RGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGRGCYNCGDTGHFARDCQNES
        G  G        G  GGGG    RGG  CYNCG  GH ARD      C   G     G   GG  GCY CGD GH ARDC  +S
Subjt:  GRGGWYE-----GPSGGGG----RGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGRGCYNCGDTGHFARDCQNES

AT4G38680.1 glycine rich protein 22.6e-3950Show/hide
Query:  KRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVT------VIGRS--------TRYGGGRGDGRGRG
        +R  G+V+WF  QKGFGFI PDD  DDLFVHQ+SIRSEGFR+L   + VEF ++ D + R KA+DV+      V G S          +GGGRG GRG G
Subjt:  KRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVT------VIGRS--------TRYGGGRGDGRGRG

Query:  GSYVRFGGGGRGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYR-GNGCAPPGRRYDGGRGYGGGRG---------------CYNCGDTGHFARDC
        G Y   GGGG G+       G  GGGGRGG +CY CG  GH+ARDC   G G    G  Y GG GYGGG G               CY+CG++GHFARDC
Subjt:  GSYVRFGGGGRGFGRGGWYEGPSGGGGRGGGECYNCGRMGHLARDCYR-GNGCAPPGRRYDGGRGYGGGRG---------------CYNCGDTGHFARDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAGGTGAAGAGATCGAGCGGTACTGTAAGGTGGTTTAGTGCACAGAAGGGGTTTGGGTTCATAGCTCCAGATGATGCTAGCGACGATCTTTTTGTCCACCAGAC
CTCCATTCGTTCAGAAGGATTTCGGACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGACGAAGATCAACGCGCCAAGGCCGTCGACGTCACTGTAATTG
GTAGATCTACCAGATATGGAGGAGGCCGCGGGGATGGGAGAGGTAGAGGTGGTTCTTATGTAAGATTCGGTGGTGGCGGTCGTGGTTTTGGCAGAGGAGGATGGTACGAA
GGCCCAAGCGGTGGTGGTGGTCGTGGCGGTGGGGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTATAGGGGTAATGGCTGTGCTCCTCCTGGCCG
TAGATACGACGGTGGTCGAGGTTATGGTGGCGGTAGAGGTTGTTATAACTGTGGAGATACAGGACATTTTGCTAGGGATTGTCAAAACGAAAGCAAATGA
mRNA sequenceShow/hide mRNA sequence
AGCAGCTCATAACGGTCTGATCCCCGAATCCTCCTTTTCCCTCGAATCTCTCTATCCGAGAGACATCCACTTTCGAAAACTGAATCAATACTCAAAGAAAGGGGAGGAAA
AATCAATTGTCCGCCATTGATTTCTTCTGTGAATGACATGCAGCTTATTCATCTAGATATATTTTGCTACAAGCTTTACAATTGTCCTTTCTTTCCTTTTTCTTTCTTTT
ACACTTTTTCCTTTTCATGGCTGAGGTGAAGAGATCGAGCGGTACTGTAAGGTGGTTTAGTGCACAGAAGGGGTTTGGGTTCATAGCTCCAGATGATGCTAGCGACGATC
TTTTTGTCCACCAGACCTCCATTCGTTCAGAAGGATTTCGGACTCTTTTCGATGGTCAAACTGTTGAGTTTACCATCGATTATGACGAAGATCAACGCGCCAAGGCCGTC
GACGTCACTGTAATTGGTAGATCTACCAGATATGGAGGAGGCCGCGGGGATGGGAGAGGTAGAGGTGGTTCTTATGTAAGATTCGGTGGTGGCGGTCGTGGTTTTGGCAG
AGGAGGATGGTACGAAGGCCCAAGCGGTGGTGGTGGTCGTGGCGGTGGGGAGTGCTACAATTGTGGCCGGATGGGTCATTTGGCGAGGGATTGTTATAGGGGTAATGGCT
GTGCTCCTCCTGGCCGTAGATACGACGGTGGTCGAGGTTATGGTGGCGGTAGAGGTTGTTATAACTGTGGAGATACAGGACATTTTGCTAGGGATTGTCAAAACGAAAGC
AAATGAAGAATGTTGGTCTTCCTTTAAGCGTGTATCAGTGACTTCCAGTCTGCAATTGAGGGCACGAGGATCTGGTGGCAATAAATCACAAGGCTTCAATTCGTCAATGT
TTCTCCTTTTGGGTATTCCATAATTTGTTGTTCATAATTAGATGATGAAAGCAATTGTTTGTATATGCTATACCTTTCTGGCATTTCTAATTCATTCTTTCTTCGCTTGT
CGTTTTATAGAATCATAATATGATATATGTAATCTGTGAAAGGTATACGTTCATACCATTTTTTATTTCTTATATACGTTTCTTCTTTGTCTATTACTGTAATGGTTTTC
TTTTTTCGCCCCATTATTGATTTCTTGGTGCTTTACTGGGATTCTTTGATTCGAAACTTCAATTATTGGTGTTGAATTGCCAATGAAAGTAATTGTCCTGTACTATGTAC
TATATTATTGCCTGTGTTTTCCCCGGAATCTGAATGAACCAGAGCTCTTAATAATATTT
Protein sequenceShow/hide protein sequence
MAEVKRSSGTVRWFSAQKGFGFIAPDDASDDLFVHQTSIRSEGFRTLFDGQTVEFTIDYDEDQRAKAVDVTVIGRSTRYGGGRGDGRGRGGSYVRFGGGGRGFGRGGWYE
GPSGGGGRGGGECYNCGRMGHLARDCYRGNGCAPPGRRYDGGRGYGGGRGCYNCGDTGHFARDCQNESK