; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016114 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016114
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionU1 small nuclear ribonucleoprotein A isoform X2
Genome locationchr08:19770356..19779005
RNA-Seq ExpressionPI0016114
SyntenyPI0016114
Gene Ontology termsGO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12872.1 U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis melo var. makuwa]3.3e-10598.03Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP

Query:  SAQ
        SAQ
Subjt:  SAQ

XP_008440306.2 PREDICTED: protein WHI4 isoform X2 [Cucumis melo]3.3e-10598.03Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP

Query:  SAQ
        SAQ
Subjt:  SAQ

XP_011657875.1 U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis sativus]3.1e-10397.06Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHP TFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP-GLGSTHMSGMGNSAYNTIGY
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSII RSTPDP GLGSTHMSGMGNSAYNTIGY
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP-GLGSTHMSGMGNSAYNTIGY

Query:  PSAQ
        PSAQ
Subjt:  PSAQ

XP_011657876.1 U1 small nuclear ribonucleoprotein A isoform X2 [Cucumis sativus]1.3e-10497.54Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHP TFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSII RSTPDPGLGSTHMSGMGNSAYNTIGYP
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP

Query:  SAQ
        SAQ
Subjt:  SAQ

XP_016899375.1 PREDICTED: U1 small nuclear ribonucleoprotein A isoform X1 [Cucumis melo]8.2e-10497.55Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP-GLGSTHMSGMGNSAYNTIGY
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP GLGSTHMSGMGNSAYNTIGY
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP-GLGSTHMSGMGNSAYNTIGY

Query:  PSAQ
        PSAQ
Subjt:  PSAQ

TrEMBL top hitse value%identityAlignment
A0A0A0KLD8 Uncharacterized protein1.5e-10397.06Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHP TFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP-GLGSTHMSGMGNSAYNTIGY
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTE+ERYGSDKKAKVSII RSTPDP GLGSTHMSGMGNSAYNTIGY
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP-GLGSTHMSGMGNSAYNTIGY

Query:  PSAQ
        PSAQ
Subjt:  PSAQ

A0A1S3B1E9 protein WHI4 isoform X21.6e-10598.03Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP

Query:  SAQ
        SAQ
Subjt:  SAQ

A0A1S4DUH9 U1 small nuclear ribonucleoprotein A isoform X14.0e-10497.55Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP-GLGSTHMSGMGNSAYNTIGY
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP GLGSTHMSGMGNSAYNTIGY
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDP-GLGSTHMSGMGNSAYNTIGY

Query:  PSAQ
        PSAQ
Subjt:  PSAQ

A0A5D3CNE3 U1 small nuclear ribonucleoprotein A isoform X21.6e-10598.03Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
        MDDM SYYPPPQPPPQPSGLEP HYPYYQVPPPPSAPPSQHYLSQHPPTFASY LPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLR

Query:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
        TPTQTTQPFAFAVFSDQQSAVGAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP
Subjt:  TPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYP

Query:  SAQ
        SAQ
Subjt:  SAQ

A0A6J1BU41 protein WHI41.8e-9690.78Show/hide
Query:  MDDMASYYPPP--QPPPQPSGLEPPHYPYYQVPPPP-SAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESS
        MDDMAS+YPPP   PPPQPSGLE PHYPYYQVPPPP SAPPSQHYL+QHPPTFA+Y LP LPH  S NEVRTLFIAGLPEDVKPREIYNLFREFPGYESS
Subjt:  MDDMASYYPPP--QPPPQPSGLEPPHYPYYQVPPPP-SAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESS

Query:  HLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTI
        HLR+PTQTTQPFAFAVFSDQQSA+GAMHAV+GMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVS+ SRSTPD GLGSTHMSGMGNSAYNTI
Subjt:  HLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTI

Query:  GYPSAQ
        GYPSAQ
Subjt:  GYPSAQ

SwissProt top hitse value%identityAlignment
Q6DH13 RNA-binding protein, mRNA-processing factor 2a2.4e-1342.22Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +A++G+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q6ZRY4 RNA-binding protein with multiple splicing 21.8e-1342.22Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++   +  QP  F +F  +  A  A +A++G+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q8VC52 RNA-binding protein with multiple splicing 21.4e-1342.22Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F +F  +  A  A +A++G+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q9W6I1 RNA-binding protein with multiple splicing 23.1e-1342.22Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F  +  A  A +A++G+ FD E    L ++ AK+N++  +++
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR

Q9YGP5 RNA-binding protein with multiple splicing 24.0e-1342.22Show/hide
Query:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR
        EVRTLF++GLP D+KPRE+Y LFR F GYE S ++  ++  QP  F  F ++  A  A +A++G+ FD E    L ++ AK+N++  + +
Subjt:  EVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTR

Arabidopsis top hitse value%identityAlignment
AT2G42240.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-4051.69Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ +YY               HY  P    PPPP   P         P  +++++ L  H +  + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNT
        SHLR+ +   +PFAFAVFSD QSAV  MHA++GMVFDLEK S L++DLAKSN +SKR+RT D+ + S KK K      +T + G GS    GM +SAYNT
Subjt:  SHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNT

Query:  IGYPSAQ
        IGY  AQ
Subjt:  IGYPSAQ

AT2G42240.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-4051.69Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ +YY               HY  P    PPPP   P         P  +++++ L  H +  + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNT
        SHLR+ +   +PFAFAVFSD QSAV  MHA++GMVFDLEK S L++DLAKSN +SKR+RT D+ + S KK K      +T + G GS    GM +SAYNT
Subjt:  SHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNT

Query:  IGYPSAQ
        IGY  AQ
Subjt:  IGYPSAQ

AT2G42240.3 RNA-binding (RRM/RBD/RNP motifs) family protein1.0e-4051.69Show/hide
Query:  MDDMASYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYES
        MDD+ +YY               HY  P    PPPP   P         P  +++++ L  H +  + +EVRTLF+AGLPEDVKPREIYNLFREFPGYE+
Subjt:  MDDMASYYPPPQPPPQPSGLEPPHY--PYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTT--SINEVRTLFIAGLPEDVKPREIYNLFREFPGYES

Query:  SHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNT
        SHLR+ +   +PFAFAVFSD QSAV  MHA++GMVFDLEK S L++DLAKSN +SKR+RT D+ + S KK K      +T + G GS    GM +SAYNT
Subjt:  SHLRTPTQTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNT

Query:  IGYPSAQ
        IGY  AQ
Subjt:  IGYPSAQ

AT3G13700.2 RNA-binding (RRM/RBD/RNP motifs) family protein9.2e-1336.92Show/hide
Query:  PHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVG
        P Y Y     P   PP    L+  P                   + TLF++GLP DVK REI+NLFR   G+ES  L+   +  Q  AFA F+  + A+ 
Subjt:  PHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFAFAVFSDQQSAVG

Query:  AMHAVSGMVFDLEKQSVLYVDLAKSNSRSK
        AM+ ++G+ FD +  S L+++LA+SNSR K
Subjt:  AMHAVSGMVFDLEKQSVLYVDLAKSNSRSK

AT3G21215.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.4e-1337.35Show/hide
Query:  YPP---PQPPPQPSGLEPPH-YPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPT
        +PP   P PP   S   PPH  P +  PPPP      H     PP                +E+RT+FIAGLP+DVK RE+ NL R  PGYE+S +    
Subjt:  YPP---PQPPPQPSGLEPPH-YPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPT

Query:  QTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDER-YGSDKKAK
        +  +P  FA+FS  Q A+ A   +  MVFD E +SV++ ++AK N   KR    D   Y   K+ +
Subjt:  QTTQPFAFAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDER-YGSDKKAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGACATGGCGAGCTACTATCCGCCACCGCAACCACCGCCACAGCCTTCTGGTCTTGAACCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCAGCACC
GCCGTCTCAGCATTACCTCTCTCAACACCCGCCCACCTTCGCTTCTTATGCCTTACCTCTTTTACCTCACACAACCTCCATCAATGAGGTCCGTACCCTATTCATAGCTG
GTCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGACCCCCACACAGACGACCCAGCCATTTGCA
TTTGCTGTATTCTCAGACCAGCAGTCTGCCGTTGGTGCAATGCATGCTGTAAGTGGCATGGTATTTGATCTTGAGAAGCAGTCAGTACTGTATGTTGATTTGGCTAAATC
TAATTCAAGATCGAAACGGACGAGGACAGAGGATGAAAGATATGGGTCAGATAAGAAAGCTAAAGTATCTATCATTTCAAGGAGTACTCCTGATCCTGGTCTTGGCAGCA
CTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGAGCTTATTCAAATTTTTTCGAGGTTAGTAATTTTAGTGAACGTTATTTA
GGTTATGCTCAATTCTGTACTCATCACCTCCTGGGGAGGGCATGCGATTGGAGTATCCTTTTACAAGTTTTTCTTTTTTTATTCTTTAAAATTGTACTGTTCTTTGAAAT
AAGAGTTATTTTTCAGAGGTCTTTTGGGTATAGTGTATGTAAGACCATTGTCAAGATGCAAACTCAAGCAATTAATGAATATAATAACTTATCTTTTTACTTTCAAGTCA
GTAAATCAACTTTAAACACGAGAAAATTGATTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGACATGGCGAGCTACTATCCGCCACCGCAACCACCGCCACAGCCTTCTGGTCTTGAACCTCCTCACTATCCCTATTACCAGGTGCCTCCTCCTCCTTCAGCACC
GCCGTCTCAGCATTACCTCTCTCAACACCCGCCCACCTTCGCTTCTTATGCCTTACCTCTTTTACCTCACACAACCTCCATCAATGAGGTCCGTACCCTATTCATAGCTG
GTCTTCCTGAAGATGTCAAGCCCCGAGAAATTTACAATCTCTTCCGGGAGTTTCCGGGATACGAGTCCTCTCATCTTCGGACCCCCACACAGACGACCCAGCCATTTGCA
TTTGCTGTATTCTCAGACCAGCAGTCTGCCGTTGGTGCAATGCATGCTGTAAGTGGCATGGTATTTGATCTTGAGAAGCAGTCAGTACTGTATGTTGATTTGGCTAAATC
TAATTCAAGATCGAAACGGACGAGGACAGAGGATGAAAGATATGGGTCAGATAAGAAAGCTAAAGTATCTATCATTTCAAGGAGTACTCCTGATCCTGGTCTTGGCAGCA
CTCACATGTCTGGAATGGGTAATTCTGCTTACAACACGATTGGTTATCCATCTGCACAAAGAGCTTATTCAAATTTTTTCGAGGTTAGTAATTTTAGTGAACGTTATTTA
GGTTATGCTCAATTCTGTACTCATCACCTCCTGGGGAGGGCATGCGATTGGAGTATCCTTTTACAAGTTTTTCTTTTTTTATTCTTTAAAATTGTACTGTTCTTTGAAAT
AAGAGTTATTTTTCAGAGGTCTTTTGGGTATAGTGTATGTAAGACCATTGTCAAGATGCAAACTCAAGCAATTAATGAATATAATAACTTATCTTTTTACTTTCAAGTCA
GTAAATCAACTTTAAACACGAGAAAATTGATTAAATGA
Protein sequenceShow/hide protein sequence
MDDMASYYPPPQPPPQPSGLEPPHYPYYQVPPPPSAPPSQHYLSQHPPTFASYALPLLPHTTSINEVRTLFIAGLPEDVKPREIYNLFREFPGYESSHLRTPTQTTQPFA
FAVFSDQQSAVGAMHAVSGMVFDLEKQSVLYVDLAKSNSRSKRTRTEDERYGSDKKAKVSIISRSTPDPGLGSTHMSGMGNSAYNTIGYPSAQRAYSNFFEVSNFSERYL
GYAQFCTHHLLGRACDWSILLQVFLFLFFKIVLFFEIRVIFQRSFGYSVCKTIVKMQTQAINEYNNLSFYFQVSKSTLNTRKLIK