; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016120 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016120
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTranscription factor UPBEAT1
Genome locationchr01:25433797..25435309
RNA-Seq ExpressionPI0016120
SyntenyPI0016120
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046707.1 transcription factor UPBEAT1 [Cucumis melo var. makuwa]1.6e-6490.29Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTC-NINTRRTTRRRSRSNSLILKKRSRRSSSS
        MGVSQETLLQIQLNMEDH+TTQD IIIIKEIRN++SNDQSIWKKKSMK EEV EEEDQEINSKGKDKSTC NINTRRTTRRRSRSNSLILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTC-NINTRRTTRRRSRSNSLILKKRSRRSSSS

Query:  SS--SRIEQRVNTLRSLVPNNDNHNHNHDDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SS  SRIEQRVN LR+LVPNND  NH  DDESC  GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SS--SRIEQRVNTLRSLVPNNDNHNHNHDDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

KAG6575752.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]8.0e-1649.71Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSS
        MG    TLL +QLNME  + TQD II           + SI KK SM+EE+             K+  +C         RR R  S  L K++RR    S
Subjt:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSS

Query:  SSRIEQRVNTLRSLVP--NNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSI
        S+RI QRV TLR+LVP  NNDN N N+D     GSLEQLFT TADYILSLQTRVR M+TLVDVLS  SS I
Subjt:  SSRIEQRVNTLRSLVP--NNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSI

KAG6593250.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]7.0e-2049.7Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSS
        MGV  ETLL +QLNM                           K+ S  E  +EE+++Q+   + ++    + N     RRR  SNSL+ K+RSR     S
Subjt:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSS

Query:  SSRIEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
        S+RIEQRV+TLR+LVPN +N+N+NH  ESCVGSLEQLFTQTADYILSLQTRVR MK LVDVLS  S+
Subjt:  SSRIEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS

KAG7025601.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. argyrosperma]5.9e-1949.7Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSS
        MGV  ETLL +QLNM+  + +QD                    + SM+E++ E++E                  +   RRR  SNSL+ K+RSR     S
Subjt:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSS

Query:  SSRIEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS
        S+RIEQRV+TLR+LVPN +N+N+NH  ESCVGSLEQLFTQTADYILSLQTRVR MK LVDVLS  S+
Subjt:  SSRIEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSS

XP_031744332.1 transcription factor UPBEAT1 [Cucumis sativus]1.6e-6992.44Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGK-DKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSS
        MGVSQETLLQIQLNMEDHQTTQD II IKEIRNNNSNDQS WKK SMKEEEV     QEINSKGK DKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGK-DKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSS

Query:  SSSRIEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SSSRIEQRVNTLRSLVPNNDNHNH+  DESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SSSRIEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

TrEMBL top hitse value%identityAlignment
A0A0A0K6D9 Uncharacterized protein8.0e-7092.44Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGK-DKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSS
        MGVSQETLLQIQLNMEDHQTTQD II IKEIRNNNSNDQS WKK SMKEEEV     QEINSKGK DKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGK-DKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSS

Query:  SSSRIEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SSSRIEQRVNTLRSLVPNNDNHNH+  DESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SSSRIEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

A0A1R3GQR1 Uncharacterized protein4.4e-0438.52Show/hide
Query:  EDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSR------IEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQ
        E Q    K   K +C    R +   R R  S+++K+R R+++    SR      IE+++ TL+ L+PNN       DDE     L+ LF +TADYILSLQ
Subjt:  EDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSR------IEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQ

Query:  TRVRLMKTLVDVLSDPSSSIDE
         RV++M+ +V VL+  S S DE
Subjt:  TRVRLMKTLVDVLSDPSSSIDE

A0A251TGE3 Putative myc-type, basic helix-loop-helix (BHLH) domain-containing protein3.4e-0435.76Show/hide
Query:  HQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSR---IEQRVNTLRSL
        HQT  D ++ IK   NNNS+    WKK    + ++ E+  Q+ +S    K T      R T  R+ +  +I ++R+RR+    S R   IE++V TL+ L
Subjt:  HQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSR---IEQRVNTLRSL

Query:  VPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDP
        +PN +         S VG L+ LF+ TA+YI +LQ RV +M+ +V+ LS+P
Subjt:  VPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDP

A0A5A7TXU1 Transcription factor UPBEAT17.7e-6590.29Show/hide
Query:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTC-NINTRRTTRRRSRSNSLILKKRSRRSSSS
        MGVSQETLLQIQLNMEDH+TTQD IIIIKEIRN++SNDQSIWKKKSMK EEV EEEDQEINSKGKDKSTC NINTRRTTRRRSRSNSLILKKRSRRSSSS
Subjt:  MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTC-NINTRRTTRRRSRSNSLILKKRSRRSSSS

Query:  SS--SRIEQRVNTLRSLVPNNDNHNHNHDDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
        SS  SRIEQRVN LR+LVPNND  NH  DDESC  GSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE
Subjt:  SS--SRIEQRVNTLRSLVPNNDNHNHNHDDESC-VGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47270.1 sequence-specific DNA binding transcription factors;transcription regulators9.8e-0433.02Show/hide
Query:  INSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSR-IEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTL
        +  +G+ K +  +  RR   RR+    ++++ R    +S    R I +RV TL+ LVPN                L+ LF QTADYIL+L+ +V++M+T+
Subjt:  INSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSR-IEQRVNTLRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTL

Query:  VDVLSD
        V VL++
Subjt:  VDVLSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAAGATCATCAAACAACACAAGATCACATCATCATCATCAAAGAGATCAGGAACAACAACTCAAA
TGATCAATCCATATGGAAGAAAAAATCAATGAAAGAAGAAGAAGTAGAAGAAGAAGAAGATCAAGAAATTAATAGCAAAGGCAAAGACAAAAGTACTTGCAATATTAATA
CAAGAAGAACAACAAGAAGAAGATCAAGAAGTAATTCATTGATATTGAAGAAGAGATCAAGAAGATCATCATCGTCATCATCAAGTAGAATAGAGCAAAGGGTCAACACT
TTGAGAAGCCTTGTACCAAACAACGACAACCACAACCACAACCACGATGACGAAAGCTGTGTCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGATTACATATTGTC
ATTACAGACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGA
mRNA sequenceShow/hide mRNA sequence
CTCTATTTGTGAAAAATATAATGGAGTATTATGCATCCGAGAAGTGTTATCAATGTAGATATTATCTCTTCTTTGTAACCATCGTATCCAAGATCAAGCTTTTAAGTTAA
TTCATAATTTCCTCTTTATATATATGTTCAACAATGTAAAATAATATTCCCCAATCTCATTATTCCCTACTTTTTTGAACTAGTTTTTGCACTTCTTTCATTAATTGAAT
TTCAAAAAAGAAACATTTAAAAATAATGTAAATTCTATAAAATAAAATTATGTACCGTTTAATTACGTGTTAAATGTTGAATGAAAGAAATATGTAGCACTAATTCTTTC
TAACCTCTCCCTCTTTCTTGGCACCTTCTCTTTTCTTTTTATTTTTCTTTTCTTTTCCAACTTATATTCTCTTTCCTCACCAAACACATTTCACAAATTCCCCCATATAA
AACCCCTCTAGCCTCCACTACCTTCATCATCCAAAATCCCAATCCCAAACATCATTTTCCCCTCTCTGTATTTCTCTAGTTTCTTCACCACAAGTGAAAAAGAAAAAAAT
TCACAAAATCAAATGGGAGTTTCCCAAGAAACCCTTTTGCAAATTCAACTCAACATGGAAGATCATCAAACAACACAAGATCACATCATCATCATCAAAGAGATCAGGAA
CAACAACTCAAATGATCAATCCATATGGAAGAAAAAATCAATGAAAGAAGAAGAAGTAGAAGAAGAAGAAGATCAAGAAATTAATAGCAAAGGCAAAGACAAAAGTACTT
GCAATATTAATACAAGAAGAACAACAAGAAGAAGATCAAGAAGTAATTCATTGATATTGAAGAAGAGATCAAGAAGATCATCATCGTCATCATCAAGTAGAATAGAGCAA
AGGGTCAACACTTTGAGAAGCCTTGTACCAAACAACGACAACCACAACCACAACCACGATGACGAAAGCTGTGTCGGATCATTAGAACAGCTTTTCACTCAAACAGCTGA
TTACATATTGTCATTACAGACAAGAGTCAGATTGATGAAGACTTTGGTTGATGTCTTGTCTGATCCTTCTTCTTCTATTGATGAGTGAGAGAATTTGAAAAAAAAAAGAA
AAAAGAAAAAAGTTTCAATTTTTTATTTTTATATATATATTTGTGTTTAATTTGTGTAAACTTATATCATTATCTCTCTTCTGTAAAGATTGATATATGTGATTTTATAT
ATATCATTCTTTTGCTTTTCTTTTTTTGGTTCTTTTTCTCTTACTTTTGCTTTATTGATCATCATTTGTCTTTGAAATGTCTCTCTGTAGTTTTAGAGAGGGAAATTTAA
CTTTGATTTTTTTTTATTTTTTTTTTTTTGGTGTGTGGAAAAGATTTGACTTTTGATTACAAGAAGTTATTTAGGGATATTGGGGTTAGCTAATTTAAGAATTTCTACTG
TTTTTTTCTTCTTCTCTTCTTTTCATTTGTAATATTATTTGTGTATTATTATTATTATGAATTTGTCTTCTTTAATTTATTGA
Protein sequenceShow/hide protein sequence
MGVSQETLLQIQLNMEDHQTTQDHIIIIKEIRNNNSNDQSIWKKKSMKEEEVEEEEDQEINSKGKDKSTCNINTRRTTRRRSRSNSLILKKRSRRSSSSSSSRIEQRVNT
LRSLVPNNDNHNHNHDDESCVGSLEQLFTQTADYILSLQTRVRLMKTLVDVLSDPSSSIDE