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PI0016139 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016139
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr06:26434753..26436344
RNA-Seq ExpressionPI0016139
SyntenyPI0016139
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.4e-2871.59Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL
        M+W N RRF A GPPIEQFDM+ TQEYIHWYKNI +LYIT+ GA M H+RS+  RLR+VA+D QQVL+ICNDN+ YMENIHYMYDV +
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL

KAA0050408.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.9e-2968.42Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRS--SRLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYLHKFKR
        M+WLN RRF A GP +EQFDM+ TQEYIHWYKNI RLYIT+ GA +GH+RS  SRLR+VAN+ QQ+L+ICNDN+ YMENIHYMYDV + L   +R
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRS--SRLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYLHKFKR

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.4e-2871.59Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL
        M+W N RRF A GPPIEQFDM+ TQEYIHWYKNI +LYIT+ GA M H+RS+  RLR+VA+D QQVL+ICNDN+ YMENIHYMYDV +
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL

TYK01570.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-2871.59Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL
        M+W N RRF A GPPIEQFDM+ TQEY HWYKNI +LYIT+LGA M H+RS+  RLR+VA+D QQVL+ICNDN+ YMENIHYMYDV +
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL

TYK14590.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-2871.11Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYL
        M+W N RRF A GPPIEQFDM+ TQEYIHWYKNI +LYIT+ GA M H+RS+  RLR+VA+D QQVL+ICNDN+ YMENIHYMYDV + L
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYL

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein1.2e-2871.59Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL
        M+W N RRF A GPPIEQFDM+ TQEYIHWYKNI +LYIT+ GA M H+RS+  RLR+VA+D QQVL+ICNDN+ YMENIHYMYDV +
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL

A0A5A7U558 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.4e-2968.42Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRS--SRLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYLHKFKR
        M+WLN RRF A GP +EQFDM+ TQEYIHWYKNI RLYIT+ GA +GH+RS  SRLR+VAN+ QQ+L+ICNDN+ YMENIHYMYDV + L   +R
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRS--SRLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYLHKFKR

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.2e-2871.59Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL
        M+W N RRF A GPPIEQFDM+ TQEYIHWYKNI +LYIT+ GA M H+RS+  RLR+VA+D QQVL+ICNDN+ YMENIHYMYDV +
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL

A0A5D3BR52 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.9e-2971.59Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL
        M+W N RRF A GPPIEQFDM+ TQEY HWYKNI +LYIT+LGA M H+RS+  RLR+VA+D QQVL+ICNDN+ YMENIHYMYDV +
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSL

A0A5D3CT32 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.9e-2971.11Show/hide
Query:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYL
        M+W N RRF A GPPIEQFDM+ TQEYIHWYKNI +LYIT+ GA M H+RS+  RLR+VA+D QQVL+ICNDN+ YMENIHYMYDV + L
Subjt:  MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSS--RLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAATGGCTAAATAGTAGAAGATTTATTGCTATGGGGCCTCCGATTGAGCAATTTGATATGAATGCAACTCAAGAATACATCCATTGGTATAAAAATATTATGAGGTT
GTATATCACTCGACTGGGAGCTACTATGGGTCATATGAGATCGAGTAGACTTCGTGATGTTGCAAATGATCGACAACAGGTCTTAGATATATGCAACGATAACAAGTGGT
ACATGGAGAATATACACTATATGTACGACGTATCATTGTACCTGCACAAGTTCAAAAGAGACGTGCTCGAGTGCAAGAGCTTGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATTTAGTGGTTTTATATATTTTTTTAATGGTTCAAATTTGACTAGGTTTTTGTAATAATTAATTAGGTATACTGTTTGTTTTTTATATAGAAAATGGTGGTAAGAAAATG
TGATTTACAAATTATATTTTTTTTTGTTTAATACTTAAAAAGTATTCATGAAAAAAAAAATTAATATCAAAACTTATGTTCTATGCAAGATATTAAAACAAGGTATTTTT
AAAATTGTTGGACTATAATTAATACTTTTACAAATATGAACTTGAAAACGATTTAGGCTCCACAGCTCCTACATGCCCATGATCATCAATTACACATGTAGTTTACGTCG
TTGCTGAACTTGAATGTTAAGTTTCATATTATTTGTTTAATATAATATGTTGTTTTTCAGATTATTTGGGAGTCGCACAGCTAAATTTCTATACGAACGGTCACGATATA
TGATAGACAATTAGTCCACTTATATGTTTTTCACATCGATGAGTGGCATTATCATGTTAAAACAATCAGACAATTTGGTCTCAAACAAGACGTTCCACTCGATTGTAATA
CTGAACCATTTTTGCACAACATTGACATGAGAACTGCTGATTAGTTTGATAGAGTTGCACACTTGATAATGCAATGGCTAAATAGTAGAAGATTTATTGCTATGGGGCCT
CCGATTGAGCAATTTGATATGAATGCAACTCAAGAATACATCCATTGGTATAAAAATATTATGAGGTTGTATATCACTCGACTGGGAGCTACTATGGGTCATATGAGATC
GAGTAGACTTCGTGATGTTGCAAATGATCGACAACAGGTCTTAGATATATGCAACGATAACAAGTGGTACATGGAGAATATACACTATATGTACGACGTATCATTGTACC
TGCACAAGTTCAAAAGAGACGTGCTCGAGTGCAAGAGCTTGAGTTGACAGAAGTTAACTAGTATGTGGAAGAAGTGCCTCCTGTGTCATAAACACAGAGCGAGACTAGTT
ATGTTAGTCCAATGATGATGATGCTAGCATTTGGAACGAGATATTATGATTTAGGAGTCGGCCAATTGTCAGACTTCGGAATAGGATATTATAATTCAGAGGTTGATCCA
TCATCGTCAAACTTTGGGCAAAGATATTATGATTTAGGGATCGATCCATCATCTTCATACATGCATGGACACGGACACGGTCATGGATAACATAATGAATATTTGTACTA
TGAAGCGCCTTGCAGCGGGACCTGACAACTAGATGACCAATAACAACCAGAAAATTAGGAGGGACTAGAGCAACAAAGAGTTCAGAGTCGACGACAACAACTCGAAATCG
ACGACGTCTAGGTTGTGAGACACATTAATTTTTTTAAAATATTGTATCAATATAAACATTCTACTTTACATTTAATTAATTTTCAATTATAAAAAATTACTAACAATTTG
TATAGTAAATATTCACGGTGAATGATATTAATATAAATGGAAAATTAAAAAAAAAAAGGTTGATAGAAAATTCGTCAA
Protein sequenceShow/hide protein sequence
MQWLNSRRFIAMGPPIEQFDMNATQEYIHWYKNIMRLYITRLGATMGHMRSSRLRDVANDRQQVLDICNDNKWYMENIHYMYDVSLYLHKFKRDVLECKSLS