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PI0016167 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016167
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr08:4326321..4326815
RNA-Seq ExpressionPI0016167
SyntenyPI0016167
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031722.1 uncharacterized protein E6C27_scaffold139G005100 [Cucumis melo var. makuwa]3.4e-5671.08Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES++EEIF+K N +DAVT  ++G PI EL+ RVD LE    + RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEIADV+ R+NLTMRAMANQAP  GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
KAA0035456.1 uncharacterized protein E6C27_scaffold285G00960 [Cucumis melo var. makuwa]1.4e-5469.28Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLEA--KVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES+++EIFEK N +DAV   ++G PI EL+ RVD LE   K+ RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLEA--KVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEI DV+ R++LTMRAMAN AP  GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-5469.88Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES++EEI EK N +DAV   ++G PI EL+ RVD LE    + RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEIADV+ R++LTMRAMANQAP  GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
KAA0046982.1 uncharacterized protein E6C27_scaffold230G001680 [Cucumis melo var. makuwa]2.2e-5570.48Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES++EEIFEK N +DAV   ++G PI EL+ RVD LE    + RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEIADV+ R++LTMRAMANQAP  GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
KAA0053339.1 reverse transcriptase [Cucumis melo var. makuwa]6.4e-5570.48Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES++EEI EK N +DAV   ++G PI EL+ RVD LE    + RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEIADV+ R++LTMRAMANQAPT GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
TrEMBL top hitse value%identityAlignment
A0A5A7SKW3 Retrotrans_gag domain-containing protein1.7e-5671.08Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES++EEIF+K N +DAVT  ++G PI EL+ RVD LE    + RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEIADV+ R+NLTMRAMANQAP  GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
A0A5A7SZS9 Retrotrans_gag domain-containing protein6.9e-5569.28Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLEA--KVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES+++EIFEK N +DAV   ++G PI EL+ RVD LE   K+ RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLEA--KVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEI DV+ R++LTMRAMAN AP  GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
A0A5A7TU46 Retrotrans_gag domain-containing protein1.1e-5570.48Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES++EEIFEK N +DAV   ++G PI EL+ RVD LE    + RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEIADV+ R++LTMRAMANQAP  GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
A0A5A7UIP7 Reverse transcriptase3.1e-5570.48Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES++EEI EK N +DAV   ++G PI EL+ RVD LE    + RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEIADV+ R++LTMRAMANQAPT GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
A0A5D3C4R1 Reverse transcriptase9.1e-5569.88Show/hide
Query:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF
        MLYLVEV + + +LES++EEI EK N +DAV   ++G PI EL+ RVD LE    + RT NYERGDSS GSVAHIEERV +LDS QK+++EMIN MSEDF
Subjt:  MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLE--AKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDF

Query:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
        RA LDV+RNEIADV+ R++LTMRAMANQAP  GAI V+RVKIPEPKPF GARDAKALEN+IF+LEQ
Subjt:  RAALDVIRNEIADVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTACCTGGTGGAAGTTTCGAACGTCGTCTACTTCTTGGAAAGCCAAATTGAAGAAATTTTCGAGAAAGCTAACGCTGTTGATGCGGTAACCGATCCCCTCGACGG
ATTACCTATAAATGAGTTGTTGATAAGAGTTGACACTCTAGAGGCAAAAGTTGCAAGAACTGGTAACTACGAGCGTGGGGACAGTTCAGCGGGCTCTGTTGCCCACATAG
AGGAACGGGTTGGCAAACTAGATAGCTTCCAAAAGTCGATTGTTGAGATGATAAACAACATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCATCAGGAATGAGATCGCA
GACGTGAGCACGAGGGTGAACCTCACGATGCGAGCCATGGCAAACCAAGCTCCAACTAGAGGAGCTATACAAGTTAACAGGGTGAAGATCCCCGAACCCAAACCCTTCTA
TGGGGCAAGGGATGCGAAAGCCTTGGAGAACTTCATATTTAACCTCGAACAATAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTACCTGGTGGAAGTTTCGAACGTCGTCTACTTCTTGGAAAGCCAAATTGAAGAAATTTTCGAGAAAGCTAACGCTGTTGATGCGGTAACCGATCCCCTCGACGG
ATTACCTATAAATGAGTTGTTGATAAGAGTTGACACTCTAGAGGCAAAAGTTGCAAGAACTGGTAACTACGAGCGTGGGGACAGTTCAGCGGGCTCTGTTGCCCACATAG
AGGAACGGGTTGGCAAACTAGATAGCTTCCAAAAGTCGATTGTTGAGATGATAAACAACATGTCAGAGGATTTTCGTGCCGCTCTTGACGTCATCAGGAATGAGATCGCA
GACGTGAGCACGAGGGTGAACCTCACGATGCGAGCCATGGCAAACCAAGCTCCAACTAGAGGAGCTATACAAGTTAACAGGGTGAAGATCCCCGAACCCAAACCCTTCTA
TGGGGCAAGGGATGCGAAAGCCTTGGAGAACTTCATATTTAACCTCGAACAATAG
Protein sequenceShow/hide protein sequence
MLYLVEVSNVVYFLESQIEEIFEKANAVDAVTDPLDGLPINELLIRVDTLEAKVARTGNYERGDSSAGSVAHIEERVGKLDSFQKSIVEMINNMSEDFRAALDVIRNEIA
DVSTRVNLTMRAMANQAPTRGAIQVNRVKIPEPKPFYGARDAKALENFIFNLEQ