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PI0016171 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016171
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr03:15924925..15925089
RNA-Seq ExpressionPI0016171
SyntenyPI0016171
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048281.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1164.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
KAA0054148.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1164.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
KAA0065286.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1164.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
KAA0068124.1 retrotransposon protein [Cucumis melo var. makuwa]1.4e-1164.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
XP_031740445.1 uncharacterized protein LOC116403439 [Cucumis sativus]1.7e-1270.37Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+   +DDVDE DSTYAT GGDDIQ+VE+ +EW++WRDD A EMFNEWQLRN+
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
TrEMBL top hitse value%identityAlignment
A0A5A7TWH8 Retrotransposon protein7.0e-1264.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
A0A5A7UGH9 Retrotransposon protein7.0e-1264.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
A0A5A7VG29 Retrotransposon protein7.0e-1264.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
A0A5A7VHB0 Retrotransposon protein7.0e-1264.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
A0A5D3D9Z3 Retrotransposon protein7.0e-1264.81Show/hide
Query:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
        MT+ ++ D++DEVDST+ATT  DDI Y+E+ +EWS+WRDD AEEMF EW+LRNQ
Subjt:  MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAGTTCCGAGGTAATAGATGACGTCGATGAAGTGGACTCAACATACGCAACGACGGGAGGTGACGACATTCAGTACGTTGAGAGCTTGGACGAATGGAGTAAGTG
GAGGGACGATAAAGCGGAGGAGATGTTCAATGAATGGCAACTGCGGAATCAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACGAGTTCCGAGGTAATAGATGACGTCGATGAAGTGGACTCAACATACGCAACGACGGGAGGTGACGACATTCAGTACGTTGAGAGCTTGGACGAATGGAGTAAGTG
GAGGGACGATAAAGCGGAGGAGATGTTCAATGAATGGCAACTGCGGAATCAGTAG
Protein sequenceShow/hide protein sequence
MTSSEVIDDVDEVDSTYATTGGDDIQYVESLDEWSKWRDDKAEEMFNEWQLRNQ