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PI0016190 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016190
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr04:17653159..17653440
RNA-Seq ExpressionPI0016190
SyntenyPI0016190
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0005525 - GTP binding (molecular function)
GO:0016772 - transferase activity, transferring phosphorus-containing groups (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050086.1 reverse transcriptase [Cucumis melo var. makuwa]1.9e-1963.74Show/hide
Query:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAF
        MTD+IDSHID KMSES++SET I ENI EQ +V T VI + +GS+   EV ARV+++  REDRS+ +S+ DPSL LPIALRKGTR CTK F
Subjt:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAF

KAA0050862.1 reverse transcriptase [Cucumis melo var. makuwa]2.2e-1563.41Show/hide
Query:  IKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAFD
        IKMSESD+SET I        SV+T VISD +GSDG  EVIA+V E+ TREDRSK I++YDP+LDL IALRKGTR+ T + D
Subjt:  IKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAFD

KAA0065411.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]2.2e-2066.29Show/hide
Query:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTK
        MTDTIDSHID K SESDRSET   ENI    SV+TG + D+EGSDG  +VI +V E+N REDR + IS+YDP LD PIALRKGTR CT+
Subjt:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTK

KAA0067418.1 tRNA modification GTPase MnmE [Cucumis melo var. makuwa]6.5e-2066.28Show/hide
Query:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRS
        +TDTIDSHID KMSESD+ ET I ENIGE  +V+TGV+S++EGSDG  EVIA+V E+N RE+  + IS+YD SLDLPIA RK TR+
Subjt:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRS

TYK06339.1 reverse transcriptase [Cucumis melo var. makuwa]1.1e-1963.74Show/hide
Query:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAF
        MTD+IDSHID KM+ESD+SET I ENI EQ +V T VI D +GS+   +V ARV+++  REDRS+ +S+ DPSL LPIALRKGTR CTK F
Subjt:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAF

TrEMBL top hitse value%identityAlignment
A0A5A7U7D6 Reverse transcriptase9.1e-2063.74Show/hide
Query:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAF
        MTD+IDSHID KMSES++SET I ENI EQ +V T VI + +GS+   EV ARV+++  REDRS+ +S+ DPSL LPIALRKGTR CTK F
Subjt:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAF

A0A5A7VI50 Retrovirus-related Pol polyprotein from transposon TNT 1-941.1e-2066.29Show/hide
Query:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTK
        MTDTIDSHID K SESDRSET   ENI    SV+TG + D+EGSDG  +VI +V E+N REDR + IS+YDP LD PIALRKGTR CT+
Subjt:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTK

A0A5A7VI58 tRNA modification GTPase MnmE3.1e-2066.28Show/hide
Query:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRS
        +TDTIDSHID KMSESD+ ET I ENIGE  +V+TGV+S++EGSDG  EVIA+V E+N RE+  + IS+YD SLDLPIA RK TR+
Subjt:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRS

A0A5D3C7K7 Reverse transcriptase5.4e-2063.74Show/hide
Query:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAF
        MTD+IDSHID KM+ESD+SET I ENI EQ +V T VI D +GS+   +V ARV+++  REDRS+ +S+ DPSL LPIALRKGTR CTK F
Subjt:  MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAF

A0A5D3CAX0 Reverse transcriptase1.0e-1563.41Show/hide
Query:  IKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAFD
        IKMSESD+SET I        SV+T VISD +GSDG  EVIA+V E+ TREDRSK I++YDP+LDL IALRKGTR+ T + D
Subjt:  IKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGATACTATTGACTCACATATTGACATCAAAATGAGTGAAAGTGATAGGTCCGAGACAGCCATCCTTGAGAACATTGGTGAACAGGACAGTGTTGAAACTGGGGT
CATTTCAGATAAAGAGGGCAGTGATGGTGCGGCTGAAGTCATTGCAAGAGTTATTGAGGATAACACTAGGGAGGATCGTTCAAAAAAAATCAGTGAGTATGATCCTTCTC
TTGATCTGCCTATTGCACTGAGAAAGGGCACCAGATCCTGCACAAAGGCATTCGATTGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGATACTATTGACTCACATATTGACATCAAAATGAGTGAAAGTGATAGGTCCGAGACAGCCATCCTTGAGAACATTGGTGAACAGGACAGTGTTGAAACTGGGGT
CATTTCAGATAAAGAGGGCAGTGATGGTGCGGCTGAAGTCATTGCAAGAGTTATTGAGGATAACACTAGGGAGGATCGTTCAAAAAAAATCAGTGAGTATGATCCTTCTC
TTGATCTGCCTATTGCACTGAGAAAGGGCACCAGATCCTGCACAAAGGCATTCGATTGTTAA
Protein sequenceShow/hide protein sequence
MTDTIDSHIDIKMSESDRSETAILENIGEQDSVETGVISDKEGSDGAAEVIARVIEDNTREDRSKKISEYDPSLDLPIALRKGTRSCTKAFDC