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PI0016191 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016191
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr04:17802780..17803392
RNA-Seq ExpressionPI0016191
SyntenyPI0016191
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-4662.86Show/hide
Query:  FLILLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT----------------
        ++  L   RSNN+ LRDVADD QQVLDI NNN+R+MEEIH MY +PIV PQ+HR R QVEE ELDEVYHNVEE+ P TQ Q+QT                
Subjt:  FLILLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT----------------

Query:  ------------RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
                     V PSSSYMDV PSTSYMHGHR D+GEHNEYLY+EAP EVSD QEYQQE ENQ ELEQHR QS
Subjt:  ------------RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.0e-4363.47Show/hide
Query:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT------------------------
        RSNN+ LRDVADD QQ LDI NNNERYMEEIH MYD+PIV P VHR   +VEE ELD+VYHNVEEVP  TQ QSQT                        
Subjt:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT------------------------

Query:  ----RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
             V PSSSY+DV PSTSYMHGH R +GEHNEYLY+EAPA+VSD QEYQQE ENQ + EQHR QS
Subjt:  ----RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]3.6e-4463.37Show/hide
Query:  LLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT-------------------
        LL+  RSNN+ LRDVADD QQ LDI NNNERYMEEIH MYD+PIV P VHR   +VEE ELD+VYHNVEEVP  TQ QSQT                   
Subjt:  LLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT-------------------

Query:  ---------RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
                  V PSSSY+DV PSTSYMHGHRR +GEHNEYLY+EAPA+VSD QEYQQE ENQ + EQHR QS
Subjt:  ---------RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

TYK22189.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]5.4e-4875.89Show/hide
Query:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT--RVSPSSSYMDVDPSTSYMHGHR
        RSNN+ LRDVADDPQQVLDI NNNERYMEEIH +YD+PIV P +HR R +VEE ELDEVYH V+EV P+TQ QSQT   V PSSSYMDVDPSTSYMHGH 
Subjt:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT--RVSPSSSYMDVDPSTSYMHGHR

Query:  RDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
        R + EHNEYLY+EAPA+VSD QEYQQE ENQ + EQHR QS
Subjt:  RDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.1e-4362.87Show/hide
Query:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQTR-----------------------
        RSNN+ LRDV +DPQQVLDI NNNERYME+IH +YD+PIV P VHRER +VEE ELDEVYHNVEEVPP TQ QSQT                        
Subjt:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQTR-----------------------

Query:  -----VSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
             V P SSYMDV PSTSYM+GH R +GEHNEYLY+EAP +VSD QEYQQE +NQ + EQHR QS
Subjt:  -----VSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.4e-4662.86Show/hide
Query:  FLILLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT----------------
        ++  L   RSNN+ LRDVADD QQVLDI NNN+R+MEEIH MY +PIV PQ+HR R QVEE ELDEVYHNVEE+ P TQ Q+QT                
Subjt:  FLILLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT----------------

Query:  ------------RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
                     V PSSSYMDV PSTSYMHGHR D+GEHNEYLY+EAP EVSD QEYQQE ENQ ELEQHR QS
Subjt:  ------------RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.0e-4363.47Show/hide
Query:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT------------------------
        RSNN+ LRDVADD QQ LDI NNNERYMEEIH MYD+PIV P VHR   +VEE ELD+VYHNVEEVP  TQ QSQT                        
Subjt:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT------------------------

Query:  ----RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
             V PSSSY+DV PSTSYMHGH R +GEHNEYLY+EAPA+VSD QEYQQE ENQ + EQHR QS
Subjt:  ----RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X21.8e-4463.37Show/hide
Query:  LLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT-------------------
        LL+  RSNN+ LRDVADD QQ LDI NNNERYMEEIH MYD+PIV P VHR   +VEE ELD+VYHNVEEVP  TQ QSQT                   
Subjt:  LLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT-------------------

Query:  ---------RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
                  V PSSSY+DV PSTSYMHGHRR +GEHNEYLY+EAPA+VSD QEYQQE ENQ + EQHR QS
Subjt:  ---------RVSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

A0A5D3DFZ9 GATA zinc finger domain-containing protein 10-like isoform X22.6e-4875.89Show/hide
Query:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT--RVSPSSSYMDVDPSTSYMHGHR
        RSNN+ LRDVADDPQQVLDI NNNERYMEEIH +YD+PIV P +HR R +VEE ELDEVYH V+EV P+TQ QSQT   V PSSSYMDVDPSTSYMHGH 
Subjt:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQT--RVSPSSSYMDVDPSTSYMHGHR

Query:  RDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
        R + EHNEYLY+EAPA+VSD QEYQQE ENQ + EQHR QS
Subjt:  RDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein5.1e-4462.87Show/hide
Query:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQTR-----------------------
        RSNN+ LRDV +DPQQVLDI NNNERYME+IH +YD+PIV P VHRER +VEE ELDEVYHNVEEVPP TQ QSQT                        
Subjt:  RSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQTR-----------------------

Query:  -----VSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS
             V P SSYMDV PSTSYM+GH R +GEHNEYLY+EAP +VSD QEYQQE +NQ + EQHR QS
Subjt:  -----VSPSSSYMDVDPSTSYMHGHRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGGCTTCATGGGCTTTTTGATTTTGTTACATCCGGCTAGATCGAACAACAGTGGACTTCGTGATGTTGCAGATGATCCACAACAGGTTCTTGATATATTCAATAA
TAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACATCCACAAGTTCATAGGGAACGTGCTCAAGTGGAAGAAGTTGAACTCGATGAGGTTT
ACCATAATGTGGAAGAAGTGCCTCCTATAACACAGATACAGAGCCAAACTAGAGTTAGTCCATCTTCTTCGTACATGGATGTTGATCCATCAACTTCATACATGCATGGA
CACAGACGAGATCATGGAGAACATAACGAGTATCTATACTATGAAGCACCTGCAGAGGTATCAGATCCACAAGAGTACCAACAAGAATCAGAGAATCAAGTTGAGCTAGA
GCAACATAGAAGTCAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCGGCTTCATGGGCTTTTTGATTTTGTTACATCCGGCTAGATCGAACAACAGTGGACTTCGTGATGTTGCAGATGATCCACAACAGGTTCTTGATATATTCAATAA
TAATGAGAGGTACATGGAGGAGATACATTATATGTACGATGTACCTATTGTACATCCACAAGTTCATAGGGAACGTGCTCAAGTGGAAGAAGTTGAACTCGATGAGGTTT
ACCATAATGTGGAAGAAGTGCCTCCTATAACACAGATACAGAGCCAAACTAGAGTTAGTCCATCTTCTTCGTACATGGATGTTGATCCATCAACTTCATACATGCATGGA
CACAGACGAGATCATGGAGAACATAACGAGTATCTATACTATGAAGCACCTGCAGAGGTATCAGATCCACAAGAGTACCAACAAGAATCAGAGAATCAAGTTGAGCTAGA
GCAACATAGAAGTCAAAGTTGA
Protein sequenceShow/hide protein sequence
MTGFMGFLILLHPARSNNSGLRDVADDPQQVLDIFNNNERYMEEIHYMYDVPIVHPQVHRERAQVEEVELDEVYHNVEEVPPITQIQSQTRVSPSSSYMDVDPSTSYMHG
HRRDHGEHNEYLYYEAPAEVSDPQEYQQESENQVELEQHRSQS