; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016197 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016197
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr08:12056434..12057155
RNA-Seq ExpressionPI0016197
SyntenyPI0016197
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038296.1 hypothetical protein E6C27_scaffold270G001610 [Cucumis melo var. makuwa]2.0e-0941.35Show/hide
Query:  EDCREVKDATLTP-ESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQDTAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQERAI
        ++ + ++D +L P  S +  VLE+ VDD L KG  I  + A ET  PSP ++T  Q DTA E +D + ++KFI     K M +G ED+FQ QA+ QE  +
Subjt:  EDCREVKDATLTP-ESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQDTAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQERAI

Query:  RQEK
        R +K
Subjt:  RQEK

KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]4.1e-1035.29Show/hide
Query:  QGLMVSYLCDIEL---EDCREVKDATLT-PESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSP--------LEQTEDQQDTAAEKNDDENFYKFINEA
        Q L+   LCD+     + C+E ++ TLT        +LE+ +DD L K  Q+  E+A +TR PSP        ++ T+ ++    + +DDE ++KFINE 
Subjt:  QGLMVSYLCDIEL---EDCREVKDATLT-PESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSP--------LEQTEDQQDTAAEKNDDENFYKFINEA

Query:  IAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELE
        +++ +  G ED+FQ QA+LQE  ++ +K + DLEL+
Subjt:  IAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELE

KAA0067817.1 hypothetical protein E6C27_scaffold2484G00210 [Cucumis melo var. makuwa]2.1e-1434.9Show/hide
Query:  EDCREVKDATLTP-ESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQDTAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQERAI
        ++ ++ KDA L P  S +  VLE+ +DDSL KG QI  E  G+T  PSP +Q   QQDT  E +D++ + KF             E I  + A L     
Subjt:  EDCREVKDATLTP-ESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQDTAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQERAI

Query:  RQEKQIMDLELEINNHHQSQHDQLASEITSLKEQNKVIVTLIKKVSLRSDKQYKSMMNYIHAAIISLVPKPAIPPEFEDPLSNVELDVAPGP
                         ++Q++ + ++I ++K       T IK+ SL ++ Q +++MNYIH  I+SLVP P  PPE E+PL+ VE    PGP
Subjt:  RQEKQIMDLELEINNHHQSQHDQLASEITSLKEQNKVIVTLIKKVSLRSDKQYKSMMNYIHAAIISLVPKPAIPPEFEDPLSNVELDVAPGP

TYK23898.1 gag-pol [Cucumis melo var. makuwa]4.0e-1352.04Show/hide
Query:  LEDCREVKDATLTPESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQD-TAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQE
        L D   V++ATL        V EEPVDDSL KG QIA E+ GE   PSPL+QT +QQD T  E +D++ ++KFI++   K MM+ LEDIFQ Q+ LQE
Subjt:  LEDCREVKDATLTPESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQD-TAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQE

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]4.1e-1035.29Show/hide
Query:  QGLMVSYLCDIEL---EDCREVKDATLT-PESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSP--------LEQTEDQQDTAAEKNDDENFYKFINEA
        Q L+   LCD+     + C+E ++ TLT        +LE+ +DD L K  Q+  E+A +TR PSP        ++ T+ ++    + +DDE ++KFINE 
Subjt:  QGLMVSYLCDIEL---EDCREVKDATLT-PESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSP--------LEQTEDQQDTAAEKNDDENFYKFINEA

Query:  IAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELE
        +++ +  G ED+FQ QA+LQE  ++ +K + DLEL+
Subjt:  IAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELE

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein2.0e-1035.29Show/hide
Query:  QGLMVSYLCDIEL---EDCREVKDATLT-PESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSP--------LEQTEDQQDTAAEKNDDENFYKFINEA
        Q L+   LCD+     + C+E ++ TLT        +LE+ +DD L K  Q+  E+A +TR PSP        ++ T+ ++    + +DDE ++KFINE 
Subjt:  QGLMVSYLCDIEL---EDCREVKDATLT-PESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSP--------LEQTEDQQDTAAEKNDDENFYKFINEA

Query:  IAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELE
        +++ +  G ED+FQ QA+LQE  ++ +K + DLEL+
Subjt:  IAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELE

A0A5A7U0L9 Uncharacterized protein9.9e-1051.85Show/hide
Query:  GETRAPSPLEQTEDQQDTAAEKNDDE-NFYKFINEAIAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELEINN---HHQ
        GET AP PL+Q  +QQ  AA ++D+E +++KFI +   K +M+G +D+FQNQ  LQE   R EKQI DLEL+I+N   HHQ
Subjt:  GETRAPSPLEQTEDQQDTAAEKNDDE-NFYKFINEAIAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELEINN---HHQ

A0A5A7VKU1 Uncharacterized protein1.0e-1434.9Show/hide
Query:  EDCREVKDATLTP-ESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQDTAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQERAI
        ++ ++ KDA L P  S +  VLE+ +DDSL KG QI  E  G+T  PSP +Q   QQDT  E +D++ + KF             E I  + A L     
Subjt:  EDCREVKDATLTP-ESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQDTAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQERAI

Query:  RQEKQIMDLELEINNHHQSQHDQLASEITSLKEQNKVIVTLIKKVSLRSDKQYKSMMNYIHAAIISLVPKPAIPPEFEDPLSNVELDVAPGP
                         ++Q++ + ++I ++K       T IK+ SL ++ Q +++MNYIH  I+SLVP P  PPE E+PL+ VE    PGP
Subjt:  RQEKQIMDLELEINNHHQSQHDQLASEITSLKEQNKVIVTLIKKVSLRSDKQYKSMMNYIHAAIISLVPKPAIPPEFEDPLSNVELDVAPGP

A0A5D3DK59 Gag-pol1.9e-1352.04Show/hide
Query:  LEDCREVKDATLTPESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQD-TAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQE
        L D   V++ATL        V EEPVDDSL KG QIA E+ GE   PSPL+QT +QQD T  E +D++ ++KFI++   K MM+ LEDIFQ Q+ LQE
Subjt:  LEDCREVKDATLTPESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQD-TAAEKNDDENFYKFINEAIAKSMMNGLEDIFQNQASLQE

A0A5D3E1H0 Uncharacterized protein2.0e-1035.29Show/hide
Query:  QGLMVSYLCDIEL---EDCREVKDATLT-PESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSP--------LEQTEDQQDTAAEKNDDENFYKFINEA
        Q L+   LCD+     + C+E ++ TLT        +LE+ +DD L K  Q+  E+A +TR PSP        ++ T+ ++    + +DDE ++KFINE 
Subjt:  QGLMVSYLCDIEL---EDCREVKDATLT-PESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSP--------LEQTEDQQDTAAEKNDDENFYKFINEA

Query:  IAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELE
        +++ +  G ED+FQ QA+LQE  ++ +K + DLEL+
Subjt:  IAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAAATCCTCAATCTCTTGTCACAGAAGCCTTTGACAAAACTATCTTTTCGCCTAACATCATCTCTAACGATCAGCTCAACGCAGGGATTGATGGTTTCATACCT
CTGCGATATTGAACTTGAAGATTGTAGAGAAGTAAAGGACGCGACGCTAACTCCTGAGTCGCAACAAACTGTGGTTCTTGAGGAGCCAGTTGATGACTCACTCCCCAAAG
GTAACCAAATAGCCCTTGAGGAAGCTGGTGAAACGCGAGCTCCTTCGCCGCTAGAACAAACTGAAGATCAACAAGACACTGCGGCGGAAAAGAATGATGATGAAAATTTC
TACAAGTTCATCAATGAGGCAATCGCAAAGTCAATGATGAATGGACTTGAGGATATTTTCCAAAACCAAGCCAGTCTGCAAGAACGCGCGATAAGACAAGAGAAGCAGAT
TATGGACTTGGAATTAGAAATAAACAACCATCATCAATCCCAGCATGACCAGCTCGCATCTGAGATCACGAGCCTTAAAGAGCAAAACAAGGTGATAGTAACTTTGATCA
AGAAAGTTTCCTTGCGGTCTGACAAGCAATATAAGTCCATGATGAATTATATCCACGCGGCCATCATAAGTCTTGTGCCCAAGCCTGCCATACCGCCTGAATTTGAAGAT
CCCCTCTCAAACGTAGAGTTGGACGTCGCGCCAGGACCTTCTGAAACGTGGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAAATCCTCAATCTCTTGTCACAGAAGCCTTTGACAAAACTATCTTTTCGCCTAACATCATCTCTAACGATCAGCTCAACGCAGGGATTGATGGTTTCATACCT
CTGCGATATTGAACTTGAAGATTGTAGAGAAGTAAAGGACGCGACGCTAACTCCTGAGTCGCAACAAACTGTGGTTCTTGAGGAGCCAGTTGATGACTCACTCCCCAAAG
GTAACCAAATAGCCCTTGAGGAAGCTGGTGAAACGCGAGCTCCTTCGCCGCTAGAACAAACTGAAGATCAACAAGACACTGCGGCGGAAAAGAATGATGATGAAAATTTC
TACAAGTTCATCAATGAGGCAATCGCAAAGTCAATGATGAATGGACTTGAGGATATTTTCCAAAACCAAGCCAGTCTGCAAGAACGCGCGATAAGACAAGAGAAGCAGAT
TATGGACTTGGAATTAGAAATAAACAACCATCATCAATCCCAGCATGACCAGCTCGCATCTGAGATCACGAGCCTTAAAGAGCAAAACAAGGTGATAGTAACTTTGATCA
AGAAAGTTTCCTTGCGGTCTGACAAGCAATATAAGTCCATGATGAATTATATCCACGCGGCCATCATAAGTCTTGTGCCCAAGCCTGCCATACCGCCTGAATTTGAAGAT
CCCCTCTCAAACGTAGAGTTGGACGTCGCGCCAGGACCTTCTGAAACGTGGCTATAA
Protein sequenceShow/hide protein sequence
MRKILNLLSQKPLTKLSFRLTSSLTISSTQGLMVSYLCDIELEDCREVKDATLTPESQQTVVLEEPVDDSLPKGNQIALEEAGETRAPSPLEQTEDQQDTAAEKNDDENF
YKFINEAIAKSMMNGLEDIFQNQASLQERAIRQEKQIMDLELEINNHHQSQHDQLASEITSLKEQNKVIVTLIKKVSLRSDKQYKSMMNYIHAAIISLVPKPAIPPEFED
PLSNVELDVAPGPSETWL