; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016199 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016199
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPMD domain-containing protein
Genome locationchr02:15125220..15125998
RNA-Seq ExpressionPI0016199
SyntenyPI0016199
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]1.4e-7556.58Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-------------------NSF--QIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL                   NS   ++        GK   VLQ SIH+EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-------------------NSF--QIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------
        G VTKVP EFCFTDCYWEWLE +VGR+ R LY +RL+G VTASLY YDRNSDVVRAFCEAWCPSTNTLHTM GE                          
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------

Query:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
                                 AY+SIVC QRNDR+T SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK S SKST
Subjt:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]4.5e-7762.5Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-----------NSFQIIYGDTFI----------SGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL           N +  +  ++ +           GK   VLQ SIH EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-----------NSFQIIYGDTFI----------SGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE------------------AYHSIVCM
        G VTKVP EFCF DCYWEWLE +VGR+ R LY +RL+G VTASLY YD NSDVVRAFCEAWCPSTNTLHTM GE                  AY+SIVC 
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE------------------AYHSIVCM

Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
        QRNDR+  SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK S SKST
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

KAA0065375.1 hypothetical protein E6C27_scaffold17G00370 [Cucumis melo var. makuwa]8.4e-7656.58Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-------------------NSF--QIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL                   NS   ++        GK   +LQ SIH EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-------------------NSF--QIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------
        G VTKVPREFCFTDCYWEWLE +VGR+ R LY +RL+G VTASLY YDRNSDVVRAFCEAWCPSTNTLHTM GE                          
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------

Query:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
                                 AY+SIVC QRNDR+T SKNDSQVTIGSWISFWYLG RSYDKPTTRKQK  S SKST
Subjt:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]4.2e-7556.23Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSLNSFQIIYGD---------------------TFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL   ++  G                          GK   VLQ SIH+EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSLNSFQIIYGD---------------------TFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------
        G VTKVP EFCFTDCYWEWLE +VGR+ R LY + L+ VVTASLY YDRNSDVVRAFCEAWCPSTNTLHTM GE                          
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------

Query:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
                                 AY+SIVC QRNDR+  SKNDSQVTIGSWISFWYLG RSYDKPTTRKQKKVS SKST
Subjt:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]4.5e-7762.5Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-----------NSFQIIYGDTFI----------SGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL           N +  +  ++ +           GK   VLQ SIH EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-----------NSFQIIYGDTFI----------SGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE------------------AYHSIVCM
        G VTKVP EFCF DCYWEWLE +VGR+ R LY +RL+G VTASLY YD NSDVVRAFCEAWCPSTNTLHTM GE                  AY+SIVC 
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE------------------AYHSIVCM

Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
        QRNDR+  SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK S SKST
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein2.0e-7556.23Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSLNSFQIIYGD---------------------TFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL   ++  G                          GK   VLQ SIH+EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSLNSFQIIYGD---------------------TFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------
        G VTKVP EFCFTDCYWEWLE +VGR+ R LY + L+ VVTASLY YDRNSDVVRAFCEAWCPSTNTLHTM GE                          
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------

Query:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
                                 AY+SIVC QRNDR+  SKNDSQVTIGSWISFWYLG RSYDKPTTRKQKKVS SKST
Subjt:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

A0A5A7TX42 Uncharacterized protein7.0e-7656.58Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-------------------NSF--QIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL                   NS   ++        GK   VLQ SIH+EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-------------------NSF--QIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------
        G VTKVP EFCFTDCYWEWLE +VGR+ R LY +RL+G VTASLY YDRNSDVVRAFCEAWCPSTNTLHTM GE                          
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------

Query:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
                                 AY+SIVC QRNDR+T SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK S SKST
Subjt:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

A0A5A7U8X8 PMD domain-containing protein2.2e-7762.5Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-----------NSFQIIYGDTFI----------SGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL           N +  +  ++ +           GK   VLQ SIH EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-----------NSFQIIYGDTFI----------SGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE------------------AYHSIVCM
        G VTKVP EFCF DCYWEWLE +VGR+ R LY +RL+G VTASLY YD NSDVVRAFCEAWCPSTNTLHTM GE                  AY+SIVC 
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE------------------AYHSIVCM

Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
        QRNDR+  SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK S SKST
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

A0A5A7VHW8 PMD domain-containing protein4.1e-7656.58Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-------------------NSF--QIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL                   NS   ++        GK   +LQ SIH EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-------------------NSF--QIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------
        G VTKVPREFCFTDCYWEWLE +VGR+ R LY +RL+G VTASLY YDRNSDVVRAFCEAWCPSTNTLHTM GE                          
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE--------------------------

Query:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
                                 AY+SIVC QRNDR+T SKNDSQVTIGSWISFWYLG RSYDKPTTRKQK  S SKST
Subjt:  -------------------------AYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

A0A5D3DCE5 PMD domain-containing protein2.2e-7762.5Show/hide
Query:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-----------NSFQIIYGDTFI----------SGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW
        MVYFTERFLS  RHL ILSD+NQPRED LSL           N +  +  ++ +           GK   VLQ SIH EAPN+ R LTL  R+IEGQ+ W
Subjt:  MVYFTERFLSRNRHLTILSDKNQPREDRLSL-----------NSFQIIYGDTFI----------SGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCW

Query:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE------------------AYHSIVCM
        G VTKVP EFCF DCYWEWLE +VGR+ R LY +RL+G VTASLY YD NSDVVRAFCEAWCPSTNTLHTM GE                  AY+SIVC 
Subjt:  GAVTKVPREFCFTDCYWEWLEFIVGRSGRFLYDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGE------------------AYHSIVCM

Query:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST
        QRNDR+  SKNDSQVTIGSWISFWYLG +SYDKPTTRKQKK S SKST
Subjt:  QRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTAGGAATAGGCACCTTACAATCCTTTCTGATAAGAATCAACCAAGAGAAGATAGACTTAGTCTCAATTCTTTCCAAATTAT
CTATGGAGATACCTTCATCTCAGGGAAAAAGCGTAGGGTCTTGCAACCTTCTATTCACGATGAGGCTCCTAATGCCGATCGAGTTCTCACTCTCAGACATCGTATAATTG
AAGGTCAAAGTTGTTGGGGTGCCGTGACTAAAGTCCCAAGAGAGTTCTGCTTTACTGATTGTTATTGGGAGTGGTTAGAGTTCATAGTTGGTCGAAGTGGGCGATTTCTC
TACGATTCTCGTTTATTTGGTGTTGTAACAGCTTCTTTGTATATGTATGATCGTAACAGCGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCCTCAACTAATACTCT
CCATACCATGGTGGGCGAGGCGTATCATTCAATAGTTTGCATGCAGAGGAATGACCGCACGACACCGTCCAAGAATGACTCCCAAGTCACTATTGGCTCATGGATTTCAT
TCTGGTATCTTGGGCCCAGAAGCTATGATAAGCCAACTACAAGGAAGCAAAAGAAGGTGTCATGTTCGAAATCCACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTACTTCACAGAACGATTCTTGTCTAGGAATAGGCACCTTACAATCCTTTCTGATAAGAATCAACCAAGAGAAGATAGACTTAGTCTCAATTCTTTCCAAATTAT
CTATGGAGATACCTTCATCTCAGGGAAAAAGCGTAGGGTCTTGCAACCTTCTATTCACGATGAGGCTCCTAATGCCGATCGAGTTCTCACTCTCAGACATCGTATAATTG
AAGGTCAAAGTTGTTGGGGTGCCGTGACTAAAGTCCCAAGAGAGTTCTGCTTTACTGATTGTTATTGGGAGTGGTTAGAGTTCATAGTTGGTCGAAGTGGGCGATTTCTC
TACGATTCTCGTTTATTTGGTGTTGTAACAGCTTCTTTGTATATGTATGATCGTAACAGCGATGTGGTTCGAGCATTTTGTGAAGCTTGGTGTCCCTCAACTAATACTCT
CCATACCATGGTGGGCGAGGCGTATCATTCAATAGTTTGCATGCAGAGGAATGACCGCACGACACCGTCCAAGAATGACTCCCAAGTCACTATTGGCTCATGGATTTCAT
TCTGGTATCTTGGGCCCAGAAGCTATGATAAGCCAACTACAAGGAAGCAAAAGAAGGTGTCATGTTCGAAATCCACCTAA
Protein sequenceShow/hide protein sequence
MVYFTERFLSRNRHLTILSDKNQPREDRLSLNSFQIIYGDTFISGKKRRVLQPSIHDEAPNADRVLTLRHRIIEGQSCWGAVTKVPREFCFTDCYWEWLEFIVGRSGRFL
YDSRLFGVVTASLYMYDRNSDVVRAFCEAWCPSTNTLHTMVGEAYHSIVCMQRNDRTTPSKNDSQVTIGSWISFWYLGPRSYDKPTTRKQKKVSCSKST