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PI0016218 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016218
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol
Genome locationchr12:15138761..15139545
RNA-Seq ExpressionPI0016218
SyntenyPI0016218
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043584.1 hypothetical protein E6C27_scaffold320G00130 [Cucumis melo var. makuwa]1.2e-1235.95Show/hide
Query:  VFDAQLNEGIDGFMQE-----LCD-TEFDAEDFREAKDTTL------------ETVDDPIPKGKEIAYAEAGETRAPSPPKQ--------TKDQQNIGAE
        +FD  L +  D  +Q+     LCD   F  +  +E+++TTL            + +DDP+ K K++   +A +TR PSPPKQ        TK ++ I  +
Subjt:  VFDAQLNEGIDGFMQE-----LCD-TEFDAEDFREAKDTTL------------ETVDDPIPKGKEIAYAEAGETRAPSPPKQ--------TKDQQNIGAE

Query:  ENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN
        ++DDE ++KFINE + +P+  G ED+FQ QANL E  ++++K + +LELK D+
Subjt:  ENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN

KAA0047757.1 hypothetical protein E6C27_scaffold1059G00180 [Cucumis melo var. makuwa]1.6e-1254.76Show/hide
Query:  AEAGETRAPSPPKQTKDQQNIGAEENDDED-FYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN---HHQ
        A  GET AP P KQ  +QQ   A E+D+ED ++KFI +  GKP++DG +D+FQNQ +L E   RHEK+I +LELKIDN   HHQ
Subjt:  AEAGETRAPSPPKQTKDQQNIGAEENDDED-FYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN---HHQ

TYK23898.1 gag-pol [Cucumis melo var. makuwa]1.6e-1251.11Show/hide
Query:  EFDAEDFREAKDTTLETVDDPIPKGKEIAYAEAGETRAPSPPKQTKDQQNIGAEENDDED-FYKFINEAIGKPMIDGLEDIFQNQANLHE
        E   E +   KD + E VDD + KGK+IAY + GE   PSP KQT +QQ+    E+DDED ++KFI++  GKPM+D LEDIFQ Q++L E
Subjt:  EFDAEDFREAKDTTLETVDDPIPKGKEIAYAEAGETRAPSPPKQTKDQQNIGAEENDDED-FYKFINEAIGKPMIDGLEDIFQNQANLHE

TYK26456.1 hypothetical protein E5676_scaffold313G00130 [Cucumis melo var. makuwa]1.7e-1149.07Show/hide
Query:  PSPPKQTKDQQNIGAEENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN---HHQSQHDQLASEIASLKEQNKAMVTLIK
        PSPPK              D++++KFI    GKPM DG EDIFQ QANL E  +R +K++ NLEL+IDN    HQ+Q D +  +I SLK QN+A+ TLIK
Subjt:  PSPPKQTKDQQNIGAEENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN---HHQSQHDQLASEIASLKEQNKAMVTLIK

Query:  KASLRSNR
        +AS ++NR
Subjt:  KASLRSNR

TYK29776.1 hypothetical protein E5676_scaffold2208G00350 [Cucumis melo var. makuwa]1.2e-1235.95Show/hide
Query:  VFDAQLNEGIDGFMQE-----LCD-TEFDAEDFREAKDTTL------------ETVDDPIPKGKEIAYAEAGETRAPSPPKQ--------TKDQQNIGAE
        +FD  L +  D  +Q+     LCD   F  +  +E+++TTL            + +DDP+ K K++   +A +TR PSPPKQ        TK ++ I  +
Subjt:  VFDAQLNEGIDGFMQE-----LCD-TEFDAEDFREAKDTTL------------ETVDDPIPKGKEIAYAEAGETRAPSPPKQ--------TKDQQNIGAE

Query:  ENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN
        ++DDE ++KFINE + +P+  G ED+FQ QANL E  ++++K + +LELK D+
Subjt:  ENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN

TrEMBL top hitse value%identityAlignment
A0A5A7TJU0 Uncharacterized protein5.8e-1335.95Show/hide
Query:  VFDAQLNEGIDGFMQE-----LCD-TEFDAEDFREAKDTTL------------ETVDDPIPKGKEIAYAEAGETRAPSPPKQ--------TKDQQNIGAE
        +FD  L +  D  +Q+     LCD   F  +  +E+++TTL            + +DDP+ K K++   +A +TR PSPPKQ        TK ++ I  +
Subjt:  VFDAQLNEGIDGFMQE-----LCD-TEFDAEDFREAKDTTL------------ETVDDPIPKGKEIAYAEAGETRAPSPPKQ--------TKDQQNIGAE

Query:  ENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN
        ++DDE ++KFINE + +P+  G ED+FQ QANL E  ++++K + +LELK D+
Subjt:  ENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN

A0A5A7U0L9 Uncharacterized protein7.6e-1354.76Show/hide
Query:  AEAGETRAPSPPKQTKDQQNIGAEENDDED-FYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN---HHQ
        A  GET AP P KQ  +QQ   A E+D+ED ++KFI +  GKP++DG +D+FQNQ +L E   RHEK+I +LELKIDN   HHQ
Subjt:  AEAGETRAPSPPKQTKDQQNIGAEENDDED-FYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN---HHQ

A0A5D3DK59 Gag-pol7.6e-1351.11Show/hide
Query:  EFDAEDFREAKDTTLETVDDPIPKGKEIAYAEAGETRAPSPPKQTKDQQNIGAEENDDED-FYKFINEAIGKPMIDGLEDIFQNQANLHE
        E   E +   KD + E VDD + KGK+IAY + GE   PSP KQT +QQ+    E+DDED ++KFI++  GKPM+D LEDIFQ Q++L E
Subjt:  EFDAEDFREAKDTTLETVDDPIPKGKEIAYAEAGETRAPSPPKQTKDQQNIGAEENDDED-FYKFINEAIGKPMIDGLEDIFQNQANLHE

A0A5D3DS12 Uncharacterized protein8.4e-1249.07Show/hide
Query:  PSPPKQTKDQQNIGAEENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN---HHQSQHDQLASEIASLKEQNKAMVTLIK
        PSPPK              D++++KFI    GKPM DG EDIFQ QANL E  +R +K++ NLEL+IDN    HQ+Q D +  +I SLK QN+A+ TLIK
Subjt:  PSPPKQTKDQQNIGAEENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN---HHQSQHDQLASEIASLKEQNKAMVTLIK

Query:  KASLRSNR
        +AS ++NR
Subjt:  KASLRSNR

A0A5D3E1H0 Uncharacterized protein5.8e-1335.95Show/hide
Query:  VFDAQLNEGIDGFMQE-----LCD-TEFDAEDFREAKDTTL------------ETVDDPIPKGKEIAYAEAGETRAPSPPKQ--------TKDQQNIGAE
        +FD  L +  D  +Q+     LCD   F  +  +E+++TTL            + +DDP+ K K++   +A +TR PSPPKQ        TK ++ I  +
Subjt:  VFDAQLNEGIDGFMQE-----LCD-TEFDAEDFREAKDTTL------------ETVDDPIPKGKEIAYAEAGETRAPSPPKQ--------TKDQQNIGAE

Query:  ENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN
        ++DDE ++KFINE + +P+  G ED+FQ QANL E  ++++K + +LELK D+
Subjt:  ENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAGCCCTATCCACCAAGTCCAAATAATTACCACTCCTACTTCCCCGCGGCAAGAGGAAAATCCTCAATCTCTTGTCACGCAAGCCCTTGATCAAACTACCTTTTC
GCCCAACATTGTTTTTGATGCCCAACTTAACGAAGGGATTGATGGCTTCATGCAAGAACTCTGCGATACAGAATTTGATGCTGAAGATTTTAGAGAAGCAAAGGACACGA
CTCTAGAGACAGTTGATGACCCAATCCCCAAAGGTAAAGAAATAGCCTATGCGGAAGCTGGTGAAACGCGAGCTCCTTCACCGCCGAAGCAAACGAAAGACCAACAAAAC
ATTGGGGCGGAAGAAAATGACGATGAAGATTTTTACAAGTTCATCAATGAGGCGATTGGAAAGCCAATGATAGATGGACTTGAAGATATCTTCCAAAACCAAGCCAATCT
ACATGAACATGCGATAAGACATGAAAAGAAAATTTCGAATTTGGAGTTAAAAATTGACAACCATCATCAATCCCAACATGACCAACTCGCCTCTGAGATTGCAAGCCTGA
AGGAGCAAAATAAGGCGATGGTAACTTTAATCAAGAAAGCTTCATTGCGGTCTAACAGGCAATACAAATCAATGATGAACTATATTCACGTGGCCATCACAAGTCTCGTG
CCCAAGCTTGCCATACTGCCTGAATTCAAAAAACCCCTTTCAGACGTTGAATTGAACGTCGTGCCAGGACCTTCTGAATTGCAGCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAGCCCTATCCACCAAGTCCAAATAATTACCACTCCTACTTCCCCGCGGCAAGAGGAAAATCCTCAATCTCTTGTCACGCAAGCCCTTGATCAAACTACCTTTTC
GCCCAACATTGTTTTTGATGCCCAACTTAACGAAGGGATTGATGGCTTCATGCAAGAACTCTGCGATACAGAATTTGATGCTGAAGATTTTAGAGAAGCAAAGGACACGA
CTCTAGAGACAGTTGATGACCCAATCCCCAAAGGTAAAGAAATAGCCTATGCGGAAGCTGGTGAAACGCGAGCTCCTTCACCGCCGAAGCAAACGAAAGACCAACAAAAC
ATTGGGGCGGAAGAAAATGACGATGAAGATTTTTACAAGTTCATCAATGAGGCGATTGGAAAGCCAATGATAGATGGACTTGAAGATATCTTCCAAAACCAAGCCAATCT
ACATGAACATGCGATAAGACATGAAAAGAAAATTTCGAATTTGGAGTTAAAAATTGACAACCATCATCAATCCCAACATGACCAACTCGCCTCTGAGATTGCAAGCCTGA
AGGAGCAAAATAAGGCGATGGTAACTTTAATCAAGAAAGCTTCATTGCGGTCTAACAGGCAATACAAATCAATGATGAACTATATTCACGTGGCCATCACAAGTCTCGTG
CCCAAGCTTGCCATACTGCCTGAATTCAAAAAACCCCTTTCAGACGTTGAATTGAACGTCGTGCCAGGACCTTCTGAATTGCAGCTATAA
Protein sequenceShow/hide protein sequence
MPSPIHQVQIITTPTSPRQEENPQSLVTQALDQTTFSPNIVFDAQLNEGIDGFMQELCDTEFDAEDFREAKDTTLETVDDPIPKGKEIAYAEAGETRAPSPPKQTKDQQN
IGAEENDDEDFYKFINEAIGKPMIDGLEDIFQNQANLHEHAIRHEKKISNLELKIDNHHQSQHDQLASEIASLKEQNKAMVTLIKKASLRSNRQYKSMMNYIHVAITSLV
PKLAILPEFKKPLSDVELNVVPGPSELQL