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PI0016229 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016229
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr08:7021208..7021824
RNA-Seq ExpressionPI0016229
SyntenyPI0016229
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041550.1 retrotransposon protein [Cucumis melo var. makuwa]5.6e-5261.24Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MA+KLPG  ++ +  IDY IKT KRTFQAIA+MRGP+C+GFGWN+E KCII E +LFDNWV+SHPAAKG LNK FSYYD+L YVF  D AT+  AETF  
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVPREYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVN
        + SN P  YEGF   D N+ E   +YSQ +DMS DD+  +RP RSS+GRTGS+ SKRKRG Q    VE I  A+D  N
Subjt:  VESNVPREYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVN

KAA0062588.1 retrotransposon protein [Cucumis melo var. makuwa]6.1e-5159.44Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MAEKLPG  ++ +  ID  IKT KRTFQAIA+MRGP+C+GFGWNDE KCI+ E +LFDNWV+SHPA KG LNK F YYD+L YVFG+D AT   AETFA 
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVP-REYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND
        V SN P   Y+ F   D N+ + P +YSQ +D+S DD+  +RP R+S+GRTGSSRSKRKRG Q    +E I  A+D  N+
Subjt:  VESNVP-REYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND

KAA0066208.1 retrotransposon protein [Cucumis melo var. makuwa]6.1e-5160.56Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MAEKLPG  ++ +  ID  IKT KRTFQAIA+MRGP+C+GFGWNDE KCII E +LFDNWV+SHPAAKG LNK F YYD+L YVFG+D AT   AETFA 
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVP-REYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND
        V SN P   Y+ F   D N+ + P +YSQ +D+S DD+  +RP R+S+GRTGSS SKRKRG Q    VE I  A+D  N+
Subjt:  VESNVP-REYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]4.7e-5158.89Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MAEKLPG+NIQ S TID  +K+ K+T+ AIA+MRGPSC+GFGWN+E +CII E DLFD+W+KSHPAAKG L+KSF YYD L YVFGKD AT A +ETF  
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVPREYEGFF-ADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND
        V SNV   +       D +D +IP MYSQ + MSPD++ G R G++S+ R  SS SKRKRG +  ETVE+I + M+F N+
Subjt:  VESNVPREYEGFF-ADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND

XP_031744343.1 uncharacterized protein LOC116404989 [Cucumis sativus]2.8e-5159.78Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        M  KLPG N+  +  ID  IKT KR++Q IA+MRGPSC GFGWND+VKCI+ E +LFDNWV+SHPAAKG LNK F YYD+L YVFGKD A    AETFA 
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVPREYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND
        V SNVP  +E F   D+NDME P M S R +MS DDI   RP R +  RT SS SKR+RGGQ +ET ++I +AM    D
Subjt:  VESNVPREYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859532.3e-5158.89Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MAEKLPG+NIQ S TID  +K+ K+T+ AIA+MRGPSC+GFGWN+E +CII E DLFD+W+KSHPAAKG L+KSF YYD L YVFGKD AT A +ETF  
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVPREYEGFF-ADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND
        V SNV   +       D +D +IP MYSQ + MSPD++ G R G++S+ R  SS SKRKRG +  ETVE+I + M+F N+
Subjt:  VESNVPREYEGFF-ADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND

A0A5A7U0H7 Retrotransposon protein2.3e-5158.89Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MAEKLPG+NIQ S TID  +K+ K+T+ AIA+MRGPSC+GFGWN+E +CII E DLFD+W+KSHPAAKG L+KSF YYD L YVFGKD AT A +ETF  
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVPREYEGFF-ADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND
        V SNV   +       D +D +IP MYSQ + MSPD++ G R G++S+ R  SS SKRKRG +  ETVE+I + M+F N+
Subjt:  VESNVPREYEGFF-ADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND

A0A5A7V6Q9 Retrotransposon protein3.0e-5160Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MA+KLPG  ++ +  ID  IKT KRTFQAIA+MRGP+C+GFGWNDE KCI+ E +LFDNWV+SHPAAKG LNKSF YYD+L YVFG+D AT   AETFA 
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVP-REYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND
        V SN P   Y+ F   D N+ + P +YSQ +D+S DD+  +RP R+S+GRTGSS SKRKRG Q    VE I  A+D  N+
Subjt:  VESNVP-REYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND

A0A5A7VES2 Retrotransposon protein3.0e-5160.56Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MAEKLPG  ++ +  ID  IKT KRTFQAIA+MRGP+C+GFGWNDE KCII E +LFDNWV+SHPAAKG LNK F YYD+L YVFG+D AT   AETFA 
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVP-REYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND
        V SN P   Y+ F   D N+ + P +YSQ +D+S DD+  +RP R+S+GRTGSS SKRKRG Q    VE I  A+D  N+
Subjt:  VESNVP-REYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND

A0A5D3D831 Retrotransposon protein2.7e-5261.24Show/hide
Query:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI
        MA+KLPG  ++ +  IDY IKT KRTFQAIA+MRGP+C+GFGWN+E KCII E +LFDNWV+SHPAAKG LNK FSYYD+L YVF  D AT+  AETF  
Subjt:  MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAI

Query:  VESNVPREYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVN
        + SN P  YEGF   D N+ E   +YSQ +DMS DD+  +RP RSS+GRTGS+ SKRKRG Q    VE I  A+D  N
Subjt:  VESNVPREYEGFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein1.4e-0527.78Show/hide
Query:  IKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAIVESNVPREY
        +K  K  +Q+   ++  S +GFGW+ E K     ++++ +++K+HP  K    +S  +++ L  +FG   AT + A    + +S  PR Y
Subjt:  IKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAIVESNVPREY

AT2G24960.2 unknown protein2.1e-0428.57Show/hide
Query:  GFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKD
        GF W+     +I ++D+++ ++++HP A+ +  K+   Y  L ++FGK+
Subjt:  GFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKD

AT4G02210.1 unknown protein1.6e-0425.3Show/hide
Query:  KTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAIVES
        KT +  F+++  +      GF W+D  + ++ +N ++D ++K HP ++ F  KS   Y  L  V+    +     E+ +  ES
Subjt:  KTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAIVES

AT4G02210.2 unknown protein1.6e-0425.3Show/hide
Query:  KTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAIVES
        KT +  F+++  +      GF W+D  + ++ +N ++D ++K HP ++ F  KS   Y  L  V+    +     E+ +  ES
Subjt:  KTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAIVES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGAAGCTGCCAGGAAGTAACATCCAGGGTTCCCTGACTATTGACTATCTGATAAAGACCTTCAAGAGAACATTCCAGGCCATAGCAAAAATGCGCGGCCCATC
ATGCACTGGGTTTGGTTGGAACGATGAAGTAAAGTGCATCATCACTGAGAATGATTTGTTCGACAATTGGGTGAAGAGCCATCCTGCTGCCAAGGGCTTCCTAAACAAAT
CGTTTTCCTATTACGACCAGCTGTTCTACGTGTTTGGGAAAGATTGCGCTACGGAAGCATGCGCGGAGACGTTCGCCATTGTGGAGTCAAATGTGCCTAGAGAATACGAA
GGATTTTTCGCTGACGATGTGAACGATATGGAGATACCTATGATGTACAGCCAGCGACTAGACATGTCGCCTGACGATATCATGGGCACACGACCCGGTCGCTCGAGTAA
GGGTAGGACTGGTTCAAGCAGATCAAAAAGGAAACGGGGAGGCCAGATGGTAGAGACTGTGGAAATCATTTGCAATGCAATGGACTTTGTGAATGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGAAGCTGCCAGGAAGTAACATCCAGGGTTCCCTGACTATTGACTATCTGATAAAGACCTTCAAGAGAACATTCCAGGCCATAGCAAAAATGCGCGGCCCATC
ATGCACTGGGTTTGGTTGGAACGATGAAGTAAAGTGCATCATCACTGAGAATGATTTGTTCGACAATTGGGTGAAGAGCCATCCTGCTGCCAAGGGCTTCCTAAACAAAT
CGTTTTCCTATTACGACCAGCTGTTCTACGTGTTTGGGAAAGATTGCGCTACGGAAGCATGCGCGGAGACGTTCGCCATTGTGGAGTCAAATGTGCCTAGAGAATACGAA
GGATTTTTCGCTGACGATGTGAACGATATGGAGATACCTATGATGTACAGCCAGCGACTAGACATGTCGCCTGACGATATCATGGGCACACGACCCGGTCGCTCGAGTAA
GGGTAGGACTGGTTCAAGCAGATCAAAAAGGAAACGGGGAGGCCAGATGGTAGAGACTGTGGAAATCATTTGCAATGCAATGGACTTTGTGAATGACTAG
Protein sequenceShow/hide protein sequence
MAEKLPGSNIQGSLTIDYLIKTFKRTFQAIAKMRGPSCTGFGWNDEVKCIITENDLFDNWVKSHPAAKGFLNKSFSYYDQLFYVFGKDCATEACAETFAIVESNVPREYE
GFFADDVNDMEIPMMYSQRLDMSPDDIMGTRPGRSSKGRTGSSRSKRKRGGQMVETVEIICNAMDFVND