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PI0016239 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016239
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr05:5146711..5147831
RNA-Seq ExpressionPI0016239
SyntenyPI0016239
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033151.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]4.0e-1846.94Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTS-PTPDELTTKLTG
        +D ++SC  ++ LI  A L+ TVS +GPFYP+L+RE+ VN+P  F DPS+ ++ K+H+RGV F +SP  +N +L + LP+D   S PTP+ L  +LTG
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTS-PTPDELTTKLTG

KAA0039034.1 uncharacterized protein E6C27_scaffold84G001230 [Cucumis melo var. makuwa]2.3e-1851.96Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLD-ILLPSDPPTSPTPDELTTKL-TGV
        SD HHSCL+IM LI +  L  T+SN+GPF  +L+RE  VN+P+ F DPSSP++  IH+ G  FTISPA IN FL+ ++  +  P+SP+ D LT+ L +G 
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLD-ILLPSDPPTSPTPDELTTKL-TGV

Query:  LS
        LS
Subjt:  LS

KAA0059938.1 flocculation protein FLO11-like [Cucumis melo var. makuwa]2.3e-1848.98Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTS-PTPDELTTKLTG
        +D ++ CLAI+ LI  A+L+ TVS +GPFYP+L+RE+ VN+PS F DPS+ ++ K+H+RGV F +SP  +N++L I L +D   S PT + L  +LTG
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTS-PTPDELTTKLTG

KAA0066044.1 uncharacterized protein E6C27_scaffold21G00170 [Cucumis melo var. makuwa]1.0e-1850Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFL-DILLPSDPPTSPTPDELTTKLTG
        SD HHSC++IM LI +A L  T+S++GPFYP+L+RE  VN+P+ F DPSSP++  +H++G  FTISP  IN FL + +  +  P+SP  D L   L+G
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFL-DILLPSDPPTSPTPDELTTKLTG

KAA0068054.1 gag-pol polyprotein [Cucumis melo var. makuwa]4.0e-1850Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFL-DILLPSDPPTSPTPDELTTKLTG
        SD H SC++IM LI +A L  T+  +GPFYP+L+RE  VN+P  F +PSSPD+H +H+RG  F ISPA IN FL +++  +  P+ P+ + LTT L+G
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFL-DILLPSDPPTSPTPDELTTKLTG

TrEMBL top hitse value%identityAlignment
A0A5A7SUK2 Flocculation protein FLO11-like1.9e-1846.94Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTS-PTPDELTTKLTG
        +D ++SC  ++ LI  A L+ TVS +GPFYP+L+RE+ VN+P  F DPS+ ++ K+H+RGV F +SP  +N +L + LP+D   S PTP+ L  +LTG
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTS-PTPDELTTKLTG

A0A5A7T6B8 Uncharacterized protein1.1e-1851.96Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLD-ILLPSDPPTSPTPDELTTKL-TGV
        SD HHSCL+IM LI +  L  T+SN+GPF  +L+RE  VN+P+ F DPSSP++  IH+ G  FTISPA IN FL+ ++  +  P+SP+ D LT+ L +G 
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLD-ILLPSDPPTSPTPDELTTKL-TGV

Query:  LS
        LS
Subjt:  LS

A0A5A7TVN6 Uncharacterized protein1.9e-1848.98Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFL-DILLPSDPPTSPTPDELTTKLTG
        SD HHSC++IM LI +A L +T+S++GPFYP+L+RE  VN+P++F DPSS D+  +H++G  FTISP  IN FL +++  +  P+S + D L + L+G
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFL-DILLPSDPPTSPTPDELTTKLTG

A0A5A7UXI2 Flocculation protein FLO11-like1.1e-1848.98Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTS-PTPDELTTKLTG
        +D ++ CLAI+ LI  A+L+ TVS +GPFYP+L+RE+ VN+PS F DPS+ ++ K+H+RGV F +SP  +N++L I L +D   S PT + L  +LTG
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTS-PTPDELTTKLTG

A0A5A7VFF7 Uncharacterized protein5.1e-1950Show/hide
Query:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFL-DILLPSDPPTSPTPDELTTKLTG
        SD HHSC++IM LI +A L  T+S++GPFYP+L+RE  VN+P+ F DPSSP++  +H++G  FTISP  IN FL + +  +  P+SP  D L   L+G
Subjt:  SDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFL-DILLPSDPPTSPTPDELTTKLTG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACACTAGACGCAGAACCTATACTCCTAAAGTCCCTGTCAAAAAGATTTCCACACCTAAAGATGTTGGTCCCTCTGTCAAGCGCTTGCGAACTAACAAACATGG
TGTTCGTATGCGTGGTACTACCAAGAAAGCTTCCACCTCTATGCATCCTTCTACACCCGTTTCATCTAATCTCGTGGTACCTTCTCCTCCTCCCTCTCTTCCTGATTCTC
CTGTTTATCCTGTGGTTCCTGATTCTTCATTGTCTTCCTCTGCCTCTGATACTCATCCTAGAAGTAGTCATTCTCCTTCACAGCTTTCTAACCACTTAAACACGCTTCCT
GCCCATGATTCTATTAATCAGTCTCCCTCTGAAGGTTCAGATGATCATCATTCTTGTCTTGCAATTATGACCCTCATATCTCAAGCAAAACTCCTGTCTACGGTTTCCAA
CCTTGGTCCGTTCTATCCAAAACTAGTTAGGGAAATGTTTGTTAATATTCCTTCCTCCTTTGAAGATCCTAGCAGCCCTGATTTTCATAAAATTCATGTGAGAGGTGTGG
CCTTCACTATCTCCCCTGCTTCTATCAATGCCTTTCTTGATATTCTTCTTCCTTCTGATCCTCCAACCTCTCCTACTCCTGATGAGCTTACAACTAAGTTAACGGGGGTA
CTGTCTCTAATTGGCCAACTACTGGTTACCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAACACTAGACGCAGAACCTATACTCCTAAAGTCCCTGTCAAAAAGATTTCCACACCTAAAGATGTTGGTCCCTCTGTCAAGCGCTTGCGAACTAACAAACATGG
TGTTCGTATGCGTGGTACTACCAAGAAAGCTTCCACCTCTATGCATCCTTCTACACCCGTTTCATCTAATCTCGTGGTACCTTCTCCTCCTCCCTCTCTTCCTGATTCTC
CTGTTTATCCTGTGGTTCCTGATTCTTCATTGTCTTCCTCTGCCTCTGATACTCATCCTAGAAGTAGTCATTCTCCTTCACAGCTTTCTAACCACTTAAACACGCTTCCT
GCCCATGATTCTATTAATCAGTCTCCCTCTGAAGGTTCAGATGATCATCATTCTTGTCTTGCAATTATGACCCTCATATCTCAAGCAAAACTCCTGTCTACGGTTTCCAA
CCTTGGTCCGTTCTATCCAAAACTAGTTAGGGAAATGTTTGTTAATATTCCTTCCTCCTTTGAAGATCCTAGCAGCCCTGATTTTCATAAAATTCATGTGAGAGGTGTGG
CCTTCACTATCTCCCCTGCTTCTATCAATGCCTTTCTTGATATTCTTCTTCCTTCTGATCCTCCAACCTCTCCTACTCCTGATGAGCTTACAACTAAGTTAACGGGGGTA
CTGTCTCTAATTGGCCAACTACTGGTTACCTTCTAG
Protein sequenceShow/hide protein sequence
MVNTRRRTYTPKVPVKKISTPKDVGPSVKRLRTNKHGVRMRGTTKKASTSMHPSTPVSSNLVVPSPPPSLPDSPVYPVVPDSSLSSSASDTHPRSSHSPSQLSNHLNTLP
AHDSINQSPSEGSDDHHSCLAIMTLISQAKLLSTVSNLGPFYPKLVREMFVNIPSSFEDPSSPDFHKIHVRGVAFTISPASINAFLDILLPSDPPTSPTPDELTTKLTGV
LSLIGQLLVTF