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PI0016267 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016267
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRING-H2 finger protein ATL56-like
Genome locationchr12:2376484..2377148
RNA-Seq ExpressionPI0016267
SyntenyPI0016267
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152551.1 uncharacterized protein LOC101222125 [Cucumis sativus]8.9e-3974.24Show/hide
Query:  MEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSD--NNNNSYGMKRFSNEDLEKIPCYEYNNKMEDFEMECVICLENFKMGERCRLLPNCNHSFHA
        MEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSD  NNNNSYGMKRFSNEDLEKIPCYEY+NK+EDFEME                          
Subjt:  MEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSD--NNNNSYGMKRFSNEDLEKIPCYEYNNKMEDFEMECVICLENFKMGERCRLLPNCNHSFHA

Query:  RCIDSWLLNKPICPICRTFAAVLPKISLIQLN
            SWLLNKPICPICRTFAAVLPKISLIQLN
Subjt:  RCIDSWLLNKPICPICRTFAAVLPKISLIQLN

XP_010101192.2 RING-H2 finger protein ATL80 [Morus notabilis]1.2e-3261.6Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRAL--REEGIWRSDNNNNSYGM-KRFSNEDLEKIPCYEYN--NKMEDFEMECVICLENFKMGERCRLLPNCN
        MVMEIV+S +LL VGIAVLVVIH+CIVGRA     +G   ++NNNN  G  KR S+EDL+ IPC++YN   + E   ++C +CLENFK G++CRLLP+CN
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRAL--REEGIWRSDNNNNSYGM-KRFSNEDLEKIPCYEYN--NKMEDFEMECVICLENFKMGERCRLLPNCN

Query:  HSFHARCIDSWLLNKPICPICRTFA
        HSFH++CIDSWLL  P+CPICRT A
Subjt:  HSFHARCIDSWLLNKPICPICRTFA

XP_022954431.1 RING-H2 finger protein ATL56-like [Cucurbita moschata]8.3e-3766.67Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALR--EEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNN----KMEDFEMECVICLENFKMGERCRLLPNC
        MVMEIVVSAVLL+VGIAVLVVIHVCIVGRA R   EGIWRS+   N       SN+DLEK+PCYEY +         ++ECV+CLE FK GERCRLLPNC
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALR--EEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNN----KMEDFEMECVICLENFKMGERCRLLPNC

Query:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI
         HSFH  CIDSWLL  PICPICRT  AV+PK  L+
Subjt:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI

XP_022994122.1 RING-H2 finger protein ATL56-like [Cucurbita maxima]4.9e-3767.41Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALR--EEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNN----KMEDFEMECVICLENFKMGERCRLLPNC
        MVMEIVVSAVLL+VGIAVLVVIHVCIVGRA R   EGIWRS+   N       SN+DLEK+PCYEY +         ++ECV+CLE FK GERCRLLPNC
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALR--EEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNN----KMEDFEMECVICLENFKMGERCRLLPNC

Query:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI
         HSFH  CIDSWLL  PICPICRT AAV PK  L+
Subjt:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI

XP_030475587.1 RING-H2 finger protein ATL56-like [Syzygium oleosum]3.6e-3264.75Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRS--DNNNNSYGMKRFSNEDLEKIPCYEYNNKMEDF--EMECVICLENFKMGERCRLLPNCNH
        MVMEI+VS VLL VGIAVLVVIHVCIVGRA RE G        N NS  +K  S EDL+K+PC+EY ++ + F  +++C +CLENFK GE+CRLLPNC H
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRS--DNNNNSYGMKRFSNEDLEKIPCYEYNNKMEDF--EMECVICLENFKMGERCRLLPNCNH

Query:  SFHARCIDSWLLNKPICPICRT
         FHA+CIDSWLL  PICPICRT
Subjt:  SFHARCIDSWLLNKPICPICRT

TrEMBL top hitse value%identityAlignment
A0A059A647 RING-type domain-containing protein4.3e-3159.84Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSD--NNNNSYGMKRFSNEDLEKIPCYEY--NNKMEDFEMECVICLENFKMGERCRLLPNCNH
        MVMEI++S VLL +GIAVLVVIHVCIVGRA RE G +       N++    + S+EDL+K+PC+EY   +K  D + +C +CLENFK GE+CRLLPNC H
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSD--NNNNSYGMKRFSNEDLEKIPCYEY--NNKMEDFEMECVICLENFKMGERCRLLPNCNH

Query:  SFHARCIDSWLLNKPICPICRT
         FHA+CIDSWLL   ICP+CRT
Subjt:  SFHARCIDSWLLNKPICPICRT

A0A6J1GQW8 RING-H2 finger protein ATL56-like4.0e-3766.67Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALR--EEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNN----KMEDFEMECVICLENFKMGERCRLLPNC
        MVMEIVVSAVLL+VGIAVLVVIHVCIVGRA R   EGIWRS+   N       SN+DLEK+PCYEY +         ++ECV+CLE FK GERCRLLPNC
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALR--EEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNN----KMEDFEMECVICLENFKMGERCRLLPNC

Query:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI
         HSFH  CIDSWLL  PICPICRT  AV+PK  L+
Subjt:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI

A0A6J1JUU5 RING-H2 finger protein ATL56-like2.4e-3767.41Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALR--EEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNN----KMEDFEMECVICLENFKMGERCRLLPNC
        MVMEIVVSAVLL+VGIAVLVVIHVCIVGRA R   EGIWRS+   N       SN+DLEK+PCYEY +         ++ECV+CLE FK GERCRLLPNC
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALR--EEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNN----KMEDFEMECVICLENFKMGERCRLLPNC

Query:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI
         HSFH  CIDSWLL  PICPICRT AAV PK  L+
Subjt:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI

A0A6P3YXL3 RING-H2 finger protein ATL74-like5.6e-3158.52Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRAL--REEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEY----NNKMEDFEMECVICLENFKMGERCRLLPNC
        MVMEIV+S +LL VGIAVLVVIHVCIVGRA     +G+       +S G KR SNEDL+ +PC++Y    +       ++C +CLENFK GE+CRLLPNC
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRAL--REEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEY----NNKMEDFEMECVICLENFKMGERCRLLPNC

Query:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI
         HSFHA CIDSWLL  PICPICRT  A  PK+ +I
Subjt:  NHSFHARCIDSWLLNKPICPICRTFAAVLPKISLI

W9RES1 RING-H2 finger protein ATL802.3e-3260.98Show/hide
Query:  MEIVVSAVLLVVGIAVLVVIHVCIVGRAL--REEGIWRSDNNNNSYGM-KRFSNEDLEKIPCYEYN--NKMEDFEMECVICLENFKMGERCRLLPNCNHS
        MEIV+S +LL VGIAVLVVIH+CIVGRA     +G   ++NNNN  G  KR S+EDL+ IPC++YN   + E   ++C +CLENFK G++CRLLP+CNHS
Subjt:  MEIVVSAVLLVVGIAVLVVIHVCIVGRAL--REEGIWRSDNNNNSYGM-KRFSNEDLEKIPCYEYN--NKMEDFEMECVICLENFKMGERCRLLPNCNHS

Query:  FHARCIDSWLLNKPICPICRTFA
        FH++CIDSWLL  P+CPICRT A
Subjt:  FHARCIDSWLLNKPICPICRTFA

SwissProt top hitse value%identityAlignment
Q8LBA0 NEP1-interacting protein-like 27.3e-1244.78Show/hide
Query:  SNEDLEKIPCYEYNNKMEDFEM-ECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICR
        S + L K+PCY  +++M   ++  C ICL++ K GE  R LP C+H+FH  C+D WL+    CPICR
Subjt:  SNEDLEKIPCYEYNNKMEDFEM-ECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICR

Q9LUL6 Putative RING-H2 finger protein ATL613.1e-1030.95Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSY---------GMKRFSNEDLEKIPCYEYNNKMEDFEMECVICLENFKMGERCRLL
        +++ + ++ V       +  V+  CI+      +     DNNN+ +         G+K +    L  IP  ++N K   + +ECV+CL     G++ R+L
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSY---------GMKRFSNEDLEKIPCYEYNNKMEDFEMECVICLENFKMGERCRLL

Query:  PNCNHSFHARCIDSWLLNKPICPICR
        P+C+H FH  CIDSWL +   CPICR
Subjt:  PNCNHSFHARCIDSWLLNKPICPICR

Q9LZV8 RING-H2 finger protein ATL747.3e-1247.22Show/hide
Query:  GMKRFSNEDLEKIPCYEY-NNKMEDFEMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICR
        G+K+    +L+K P  EY + +++    EC ICL  F  GER R+LP CNHSFH  CID+WL++   CP CR
Subjt:  GMKRFSNEDLEKIPCYEY-NNKMEDFEMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICR

Q9SRQ8 RING-H2 finger protein ATL518.7e-1333.94Show/hide
Query:  WRSDNNNNSYGMKR------------FSNEDLEKIPCYEYNNKMEDF--EMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICRTFAAV
        W+  NNNN+ G                    ++ I  Y+Y  KM+ F    +C +CL  F+  E  RLLP CNH+FH  CID+WL +   CP+CR F   
Subjt:  WRSDNNNNSYGMKR------------FSNEDLEKIPCYEYNNKMEDF--EMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICRTFAAV

Query:  LPKISLIQL
           + ++ L
Subjt:  LPKISLIQL

Q9ZV51 RING-H2 finger protein ATL563.1e-1029.41Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYN--NKMEDFEMECVICLENFKMGERCRLLPNCNHSF
        ++M  +    L+++GIA ++++ + +           R+    +S G+   S+  ++K+P ++++  +    +E +CV+C + F+ G+ CR LP C H F
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYN--NKMEDFEMECVICLENFKMGERCRLLPNCNHSF

Query:  HARCIDSWLLNKPICPICR
        H +C+D+WLL    CPICR
Subjt:  HARCIDSWLLNKPICPICR

Arabidopsis top hitse value%identityAlignment
AT1G74410.1 RING/U-box superfamily protein5.2e-1344.78Show/hide
Query:  SNEDLEKIPCYEYNNKMEDFEM-ECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICR
        S + L K+PCY  +++M   ++  C ICL++ K GE  R LP C+H+FH  C+D WL+    CPICR
Subjt:  SNEDLEKIPCYEYNNKMEDFEM-ECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICR

AT2G18670.1 RING/U-box superfamily protein2.2e-1129.41Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYN--NKMEDFEMECVICLENFKMGERCRLLPNCNHSF
        ++M  +    L+++GIA ++++ + +           R+    +S G+   S+  ++K+P ++++  +    +E +CV+C + F+ G+ CR LP C H F
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYN--NKMEDFEMECVICLENFKMGERCRLLPNCNHSF

Query:  HARCIDSWLLNKPICPICR
        H +C+D+WLL    CPICR
Subjt:  HARCIDSWLLNKPICPICR

AT3G03550.1 RING/U-box superfamily protein6.2e-1433.94Show/hide
Query:  WRSDNNNNSYGMKR------------FSNEDLEKIPCYEYNNKMEDF--EMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICRTFAAV
        W+  NNNN+ G                    ++ I  Y+Y  KM+ F    +C +CL  F+  E  RLLP CNH+FH  CID+WL +   CP+CR F   
Subjt:  WRSDNNNNSYGMKR------------FSNEDLEKIPCYEYNNKMEDF--EMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICRTFAAV

Query:  LPKISLIQL
           + ++ L
Subjt:  LPKISLIQL

AT3G14320.1 Zinc finger, C3HC4 type (RING finger) family protein2.2e-1130.95Show/hide
Query:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSY---------GMKRFSNEDLEKIPCYEYNNKMEDFEMECVICLENFKMGERCRLL
        +++ + ++ V       +  V+  CI+      +     DNNN+ +         G+K +    L  IP  ++N K   + +ECV+CL     G++ R+L
Subjt:  MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSY---------GMKRFSNEDLEKIPCYEYNNKMEDFEMECVICLENFKMGERCRLL

Query:  PNCNHSFHARCIDSWLLNKPICPICR
        P+C+H FH  CIDSWL +   CPICR
Subjt:  PNCNHSFHARCIDSWLLNKPICPICR

AT5G01880.1 RING/U-box superfamily protein5.2e-1347.22Show/hide
Query:  GMKRFSNEDLEKIPCYEY-NNKMEDFEMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICR
        G+K+    +L+K P  EY + +++    EC ICL  F  GER R+LP CNHSFH  CID+WL++   CP CR
Subjt:  GMKRFSNEDLEKIPCYEY-NNKMEDFEMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNKPICPICR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATGGAGATTGTTGTATCAGCTGTTCTTTTAGTGGTTGGAATAGCTGTTTTAGTTGTAATTCATGTTTGTATTGTTGGGAGAGCTTTAAGAGAAGAAGGAATTTG
GAGAAGTGATAATAATAATAATAGCTATGGAATGAAGAGATTTTCAAATGAAGATTTGGAGAAGATTCCTTGTTATGAGTACAACAACAAAATGGAGGATTTTGAAATGG
AATGTGTGATTTGTTTGGAGAACTTCAAAATGGGGGAAAGATGCAGATTGTTGCCTAATTGTAATCATAGTTTTCATGCTCGATGTATAGATTCTTGGCTTTTGAATAAA
CCCATTTGCCCAATTTGTAGAACTTTTGCTGCTGTTCTTCCTAAAATTTCATTGATTCAATTGAATTGA
mRNA sequenceShow/hide mRNA sequence
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTAATCTCTCTCTGTCTCTGTGTGTCTTTAAAACTCAATCACAACAAAATTCTTCCTTTTGAAGATCCAAAATGAGT
GAATCTACACAATAAAACCAAAAACAAAACAAAAGGGGTTTGTCATTTTGTGGAGATTATTATGGTTATGGAGATTGTTGTATCAGCTGTTCTTTTAGTGGTTGGAATAG
CTGTTTTAGTTGTAATTCATGTTTGTATTGTTGGGAGAGCTTTAAGAGAAGAAGGAATTTGGAGAAGTGATAATAATAATAATAGCTATGGAATGAAGAGATTTTCAAAT
GAAGATTTGGAGAAGATTCCTTGTTATGAGTACAACAACAAAATGGAGGATTTTGAAATGGAATGTGTGATTTGTTTGGAGAACTTCAAAATGGGGGAAAGATGCAGATT
GTTGCCTAATTGTAATCATAGTTTTCATGCTCGATGTATAGATTCTTGGCTTTTGAATAAACCCATTTGCCCAATTTGTAGAACTTTTGCTGCTGTTCTTCCTAAAATTT
CATTGATTCAATTGAATTGAATTGGTTCATGGTTCTGATTATGGGGTTTGTGAGTTCTGCTGCCGCTTGTGGTGGCCGGAGGAAGTCGACATTCATGAGAAGCACCGCCA
TCTAC
Protein sequenceShow/hide protein sequence
MVMEIVVSAVLLVVGIAVLVVIHVCIVGRALREEGIWRSDNNNNSYGMKRFSNEDLEKIPCYEYNNKMEDFEMECVICLENFKMGERCRLLPNCNHSFHARCIDSWLLNK
PICPICRTFAAVLPKISLIQLN