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PI0016268 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016268
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr03:20293847..20294203
RNA-Seq ExpressionPI0016268
SyntenyPI0016268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045021.1 hypothetical protein E6C27_scaffold30G00060 [Cucumis melo var. makuwa]2.7e-1555.17Show/hide
Query:  FYFGLNKDTQQTTNALFVRG-MLRSSYNKIKAMLDSMANNNQEWDDDGFGS-----RHKGRRMIEEGGNKNTMLALQDQVTSMNNLL
        FYFGL++DTQQT  A+FV G MLRSSYN+I+  LD M NN+QEW DDGFGS     R++G +  ++G ++N ++AL+ QVT M+ LL
Subjt:  FYFGLNKDTQQTTNALFVRG-MLRSSYNKIKAMLDSMANNNQEWDDDGFGS-----RHKGRRMIEEGGNKNTMLALQDQVTSMNNLL

KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]2.9e-1750.98Show/hide
Query:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRH---KGRRMIEEGGNKNTMLALQDQVTSMNN
        +VK CLH+ I +CVLME FYF L++D QQT + +FV G+LR+SYN+ K MLD+M +N+QE  DD   S+    + R   +EG ++N M+ LQ QVT MN 
Subjt:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRH---KGRRMIEEGGNKNTMLALQDQVTSMNN

Query:  LL
        LL
Subjt:  LL

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]2.5e-2457.72Show/hide
Query:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRH-----KGRR-MIEEGGNKNTMLALQDQVTS
        M+K+C H+ I ECVLME FYFGL+K+T Q+ N +F  GMLRSSYN+IK MLD+MA+N+QEW D+ FGSR+     KG R  IE+G + + M+ALQ QV  
Subjt:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRH-----KGRR-MIEEGGNKNTMLALQDQVTS

Query:  MNNLLQSMAVSQVNATGSSYQTV
        M N+LQSMA+ QVN   SS Q V
Subjt:  MNNLLQSMAVSQVNATGSSYQTV

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]9.7e-2962.39Show/hide
Query:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRHKGRRMIEEGGNKNTMLALQDQVTSMNNLLQ
        +VK C  + I ECV MEVFYFGL+KDT Q  N LFV GMLRSSYN+IKA LDSM+NN+QEWDD GFGSRH+GR   +EG +K+ ++ LQ Q+ +MNNLLQ
Subjt:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRHKGRRMIEEGGNKNTMLALQDQVTSMNNLLQ

Query:  SMAVSQVNATGSSYQTV
        SM +SQVNA  +    V
Subjt:  SMAVSQVNATGSSYQTV

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]2.9e-2554.76Show/hide
Query:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGS--------RHKGRRMIEEGGNKNTMLALQDQV
        M+K CLH++IL CV++E FYFGL++DTQQ  +A+F+ GMLR S N IK  LD+M +N+QEW D+ FGS        R KGR    +G N N M+ LQ QV
Subjt:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGS--------RHKGRRMIEEGGNKNTMLALQDQV

Query:  TSMNNLLQSMAVSQVNATGSSYQTVN
        T MN LLQSMA+SQ+NA GSS + V+
Subjt:  TSMNNLLQSMAVSQVNATGSSYQTVN

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein4.7e-2962.39Show/hide
Query:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRHKGRRMIEEGGNKNTMLALQDQVTSMNNLLQ
        +VK C  + I ECV MEVFYFGL+KDT Q  N LFV GMLRSSYN+IKA LDSM+NN+QEWDD GFGSRH+GR   +EG +K+ ++ LQ Q+ +MNNLLQ
Subjt:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRHKGRRMIEEGGNKNTMLALQDQVTSMNNLLQ

Query:  SMAVSQVNATGSSYQTV
        SM +SQVNA  +    V
Subjt:  SMAVSQVNATGSSYQTV

A0A0A0L0Y4 Uncharacterized protein1.4e-2554.76Show/hide
Query:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGS--------RHKGRRMIEEGGNKNTMLALQDQV
        M+K CLH++IL CV++E FYFGL++DTQQ  +A+F+ GMLR S N IK  LD+M +N+QEW D+ FGS        R KGR    +G N N M+ LQ QV
Subjt:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGS--------RHKGRRMIEEGGNKNTMLALQDQV

Query:  TSMNNLLQSMAVSQVNATGSSYQTVN
        T MN LLQSMA+SQ+NA GSS + V+
Subjt:  TSMNNLLQSMAVSQVNATGSSYQTVN

A0A5A7TUE1 Uncharacterized protein1.4e-1750.98Show/hide
Query:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRH---KGRRMIEEGGNKNTMLALQDQVTSMNN
        +VK CLH+ I +CVLME FYF L++D QQT + +FV G+LR+SYN+ K MLD+M +N+QE  DD   S+    + R   +EG ++N M+ LQ QVT MN 
Subjt:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRH---KGRRMIEEGGNKNTMLALQDQVTSMNN

Query:  LL
        LL
Subjt:  LL

A0A5D3CC26 Uncharacterized protein1.2e-2457.72Show/hide
Query:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRH-----KGRR-MIEEGGNKNTMLALQDQVTS
        M+K+C H+ I ECVLME FYFGL+K+T Q+ N +F  GMLRSSYN+IK MLD+MA+N+QEW D+ FGSR+     KG R  IE+G + + M+ALQ QV  
Subjt:  MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRH-----KGRR-MIEEGGNKNTMLALQDQVTS

Query:  MNNLLQSMAVSQVNATGSSYQTV
        M N+LQSMA+ QVN   SS Q V
Subjt:  MNNLLQSMAVSQVNATGSSYQTV

A0A5D3CV99 Uncharacterized protein1.3e-1555.17Show/hide
Query:  FYFGLNKDTQQTTNALFVRG-MLRSSYNKIKAMLDSMANNNQEWDDDGFGS-----RHKGRRMIEEGGNKNTMLALQDQVTSMNNLL
        FYFGL++DTQQT  A+FV G MLRSSYN+I+  LD M NN+QEW DDGFGS     R++G +  ++G ++N ++AL+ QVT M+ LL
Subjt:  FYFGLNKDTQQTTNALFVRG-MLRSSYNKIKAMLDSMANNNQEWDDDGFGS-----RHKGRRMIEEGGNKNTMLALQDQVTSMNNLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGAAATGCCTTCACAACGACATTCTCGAATGTGTGCTAATGGAGGTGTTCTATTTTGGGCTAAATAAAGATACTCAGCAGACAACTAATGCATTATTTGTAAG
AGGAATGCTAAGGAGCTCCTACAACAAGATCAAAGCTATGTTAGATTCTATGGCTAACAACAATCAGGAATGGGATGATGATGGCTTTGGTTCTCGTCACAAAGGAAGAA
GAATGATTGAGGAAGGAGGAAATAAAAATACAATGCTGGCGTTACAAGATCAAGTAACTTCCATGAACAACCTGTTACAATCTATGGCAGTATCACAAGTTAATGCCACA
GGAAGTTCATATCAAACGGTAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGAAATGCCTTCACAACGACATTCTCGAATGTGTGCTAATGGAGGTGTTCTATTTTGGGCTAAATAAAGATACTCAGCAGACAACTAATGCATTATTTGTAAG
AGGAATGCTAAGGAGCTCCTACAACAAGATCAAAGCTATGTTAGATTCTATGGCTAACAACAATCAGGAATGGGATGATGATGGCTTTGGTTCTCGTCACAAAGGAAGAA
GAATGATTGAGGAAGGAGGAAATAAAAATACAATGCTGGCGTTACAAGATCAAGTAACTTCCATGAACAACCTGTTACAATCTATGGCAGTATCACAAGTTAATGCCACA
GGAAGTTCATATCAAACGGTAAATTAG
Protein sequenceShow/hide protein sequence
MVKKCLHNDILECVLMEVFYFGLNKDTQQTTNALFVRGMLRSSYNKIKAMLDSMANNNQEWDDDGFGSRHKGRRMIEEGGNKNTMLALQDQVTSMNNLLQSMAVSQVNAT
GSSYQTVN