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PI0016279 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016279
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr07:16887375..16887608
RNA-Seq ExpressionPI0016279
SyntenyPI0016279
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044273.1 uncharacterized protein E6C27_scaffold2741G00320 [Cucumis melo var. makuwa]2.6e-2272.73Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        M FNDEE+KFNVVNAMKFP DD+NY+ I+S GW Y +E V  ELFS KEFFE+EDPNYILEE N +S ERK ESLDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]1.5e-2270.13Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        MCFNDEEIKFN   +MKFPA+D  Y+AIESLGWDYC+EE   ELFS +EFFE+EDP+YILEEVN++  + K ESLDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

KAA0062395.1 uncharacterized protein E6C27_scaffold154G001730 [Cucumis melo var. makuwa]9.8e-2270.13Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        M FN+EEI FNV+NAMKFPA+ ENYSAIESLGWDYC+EE   ELFS +EF E+++P+YILEEVN VS E+K + LDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

KAA0066655.1 uncharacterized protein E6C27_scaffold979G00870 [Cucumis melo var. makuwa]1.5e-2272.73Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        M FNDEEIKFN+VN +KFP+D EN SAIES  WDYCEEE C ELFS  EF E++ PNYILEEVN VS E K ESLDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

TYK05498.1 uncharacterized protein E5676_scaffold83G002090 [Cucumis melo var. makuwa]4.0e-2374.03Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        M FNDEE+KFNVVNAMKFP DD+NY+ I+S GW Y +EEV  ELFS KEFFE+EDPNYILEE N +S ERK ESLDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

TrEMBL top hitse value%identityAlignment
A0A5A7TL87 Uncharacterized protein1.2e-2272.73Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        M FNDEE+KFNVVNAMKFP DD+NY+ I+S GW Y +E V  ELFS KEFFE+EDPNYILEE N +S ERK ESLDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

A0A5A7UE99 Uncharacterized protein7.3e-2370.13Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        MCFNDEEIKFN   +MKFPA+D  Y+AIESLGWDYC+EE   ELFS +EFFE+EDP+YILEEVN++  + K ESLDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

A0A5A7V931 Uncharacterized protein4.7e-2270.13Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        M FN+EEI FNV+NAMKFPA+ ENYSAIESLGWDYC+EE   ELFS +EF E+++P+YILEEVN VS E+K + LDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

A0A5D3BYK3 Uncharacterized protein7.3e-2372.73Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        M FNDEEIKFN+VN +KFP+D EN SAIES  WDYCEEE C ELFS  EF E++ PNYILEEVN VS E K ESLDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

A0A5D3C2R8 Uncharacterized protein1.9e-2374.03Show/hide
Query:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL
        M FNDEE+KFNVVNAMKFP DD+NY+ I+S GW Y +EEV  ELFS KEFFE+EDPNYILEE N +S ERK ESLDL
Subjt:  MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTTCAATGATGAAGAGATTAAATTCAACGTTGTCAACGCGATGAAGTTTCCCGCTGATGATGAAAACTACAGCGCAATAGAATCCCTTGGGTGGGATTATTGCGA
GGAAGAAGTATGTTCTGAACTATTCAGCCCTAAAGAATTCTTTGAAAAAGAAGACCCCAATTACATCTTGGAAGAAGTGAACATCGTGTCTAGCGAAAGGAAGTTAGAGT
CTTTGGATCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGTTTCAATGATGAAGAGATTAAATTCAACGTTGTCAACGCGATGAAGTTTCCCGCTGATGATGAAAACTACAGCGCAATAGAATCCCTTGGGTGGGATTATTGCGA
GGAAGAAGTATGTTCTGAACTATTCAGCCCTAAAGAATTCTTTGAAAAAGAAGACCCCAATTACATCTTGGAAGAAGTGAACATCGTGTCTAGCGAAAGGAAGTTAGAGT
CTTTGGATCTATAA
Protein sequenceShow/hide protein sequence
MCFNDEEIKFNVVNAMKFPADDENYSAIESLGWDYCEEEVCSELFSPKEFFEKEDPNYILEEVNIVSSERKLESLDL