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PI0016287 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016287
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein pleiotropic regulatory locus 1
Genome locationchr08:21816598..21817777
RNA-Seq ExpressionPI0016287
SyntenyPI0016287
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAD1833291.1 unnamed protein product [Ananas comosus var. bracteatus]6.4e-0480.65Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT
        DRTIKIWDV T KLKLTLT H +QIRGLAV+
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT

CDY27173.1 BnaA09g36290D [Brassica napus]4.3e-0859.65Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNKSNAGISNRTRL
        DRTIK+WDV +  LKLTLT H  Q+RGLAV+      C LLVM +KSNAG  +R RL
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNKSNAGISNRTRL

KAE8717673.1 Protein pleiotropic regulatory locus 1 [Hibiscus syriacus]5.8e-0565.22Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNK
        DRTIKIWDV + +LKLTLT H +QIRGLAV+     ICF LVM +K
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNK

OAE24937.1 hypothetical protein AXG93_3545s1000 [Marchantia polymorpha subsp. ruderalis]8.4e-0475Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP
        DRTIKIW+  T KLKLTLT H +QIRGLAV+P
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP

XP_020108741.1 protein pleiotropic regulatory locus 1 [Ananas comosus]6.4e-0480.65Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT
        DRTIKIWDV T KLKLTLT H +QIRGLAV+
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT

TrEMBL top hitse value%identityAlignment
A0A078GRA2 BnaA09g36290D protein2.1e-0859.65Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNKSNAGISNRTRL
        DRTIK+WDV +  LKLTLT H  Q+RGLAV+      C LLVM +KSNAG  +R RL
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNKSNAGISNRTRL

A0A199UGN6 protein pleiotropic regulatory locus 13.1e-0480.65Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT
        DRTIKIWDV T KLKLTLT H +QIRGLAV+
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT

A0A6A3BM41 Protein pleiotropic regulatory locus 12.8e-0565.22Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNK
        DRTIKIWDV + +LKLTLT H +QIRGLAV+     ICF LVM +K
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNK

A0A6V7PR59 WD_REPEATS_REGION domain-containing protein3.1e-0480.65Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT
        DRTIKIWDV T KLKLTLT H +QIRGLAV+
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT

A0A7N0USP4 WD_REPEATS_REGION domain-containing protein4.1e-0475Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP
        DRTIKIWDV + KLKLTLT H +Q+RGLAV+P
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP

SwissProt top hitse value%identityAlignment
O13615 Pre-mRNA-splicing factor prp56.0e-0560Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP--PTLLIC
        DRTIKIWD+ +  LKLTLT H   +RGLAV+P  P L  C
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP--PTLLIC

Q39190 Protein pleiotropic regulator PRL21.6e-0574.19Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT
        DRTIKIWDV T  LKLTLT H  Q+RGLAV+
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT

Q42384 Protein pleiotropic regulatory locus 17.1e-0674.19Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT
        DRTIKIWDV T  LKLTLT H +Q+RGLAV+
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT

Q4WT34 Pre-mRNA-splicing factor prp467.9e-0557.5Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP--PTLLIC
        DRTIKIW++ T  L+LTLT H   +RGLAV+P  P L  C
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP--PTLLIC

Q5BE22 Pre-mRNA-splicing factor prp467.9e-0557.5Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP--PTLLIC
        DRTIKIW++ T  L+LTLT H   +RGLAV+P  P L  C
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTP--PTLLIC

Arabidopsis top hitse value%identityAlignment
AT3G16650.1 Transducin/WD40 repeat-like superfamily protein1.1e-0674.19Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT
        DRTIKIWDV T  LKLTLT H  Q+RGLAV+
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT

AT4G15900.1 pleiotropic regulatory locus 15.1e-0774.19Show/hide
Query:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT
        DRTIKIWDV T  LKLTLT H +Q+RGLAV+
Subjt:  DRTIKIWDVVTDKLKLTLTSHTDQIRGLAVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTTTTCTTTATTTTCATCATATCCGTATTTAGTAGATCGTACCATCAAGATTTGGGATGTTGTAACTGATAAGTTAAAACTCACACTGACTAGCCATACTGATCA
AATACGAGGTCTTGCTGTAACACCACCAACCCTACTTATATGTTTTCTGCTGGTGATGAAGAACAAGTCAAATGCTGGGATCTCTAACAGAACAAGGTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGTTTTCTTTATTTTCATCATATCCGTATTTAGTAGATCGTACCATCAAGATTTGGGATGTTGTAACTGATAAGTTAAAACTCACACTGACTAGCCATACTGATCA
AATACGAGGTCTTGCTGTAACACCACCAACCCTACTTATATGTTTTCTGCTGGTGATGAAGAACAAGTCAAATGCTGGGATCTCTAACAGAACAAGGTTGTGA
Protein sequenceShow/hide protein sequence
MMFSLFSSYPYLVDRTIKIWDVVTDKLKLTLTSHTDQIRGLAVTPPTLLICFLLVMKNKSNAGISNRTRL