; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016289 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016289
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr08:13120881..13121901
RNA-Seq ExpressionPI0016289
SyntenyPI0016289
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0048507 - meristem development (biological process)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-2943.3Show/hide
Query:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATH------------------------------------------------------------------
        +A QL HAN+HLL GRA GSRW+DQFCVT+ ATH                                                                  
Subjt:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATH------------------------------------------------------------------

Query:  ----------------------RSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT
                              RSNN RLRDVADDPQQ+L ICNNNKRYMEEIH MY + I+PPPVH GRV+VEE ELDEVYHNVEEVP  TQT
Subjt:  ----------------------RSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT

KAA0064192.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-2766.04Show/hide
Query:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEV
        +A QL HANDHLL GRA GS              RSNN RLRDVA+DPQQ+L ICNNN+RYMEEIH MY +PI+PP  H G V+VEE ELDEVYHNVEEV
Subjt:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEV

Query:  PLVTQT
        P +TQT
Subjt:  PLVTQT

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]7.6e-2566.29Show/hide
Query:  HGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT
        H  R   QF + ++   RSNN RLRDVADDPQQ+L ICNNN+RYMEEIH MY +PI+P P+H GR++VEE ELDEVYHNVEEVP  T+T
Subjt:  HGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT

TYK02837.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.6e-2766.04Show/hide
Query:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEV
        +A QL HANDHLL GRA GS              RSNN RLRDVA+DPQQ+L ICNNN+RYMEEIH MY +PI+PP  H G V+VEE ELDEVYHNVEEV
Subjt:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEV

Query:  PLVTQT
        P  TQT
Subjt:  PLVTQT

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.9e-2581.94Show/hide
Query:  RSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT
        RSNN RLRDVADDPQQ+L ICNNNKRYMEEIH MY + I+PPPVH GRV+VEE ELDEVYHNVEEVP  TQT
Subjt:  RSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-2943.3Show/hide
Query:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATH------------------------------------------------------------------
        +A QL HAN+HLL GRA GSRW+DQFCVT+ ATH                                                                  
Subjt:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATH------------------------------------------------------------------

Query:  ----------------------RSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT
                              RSNN RLRDVADDPQQ+L ICNNNKRYMEEIH MY + I+PPPVH GRV+VEE ELDEVYHNVEEVP  TQT
Subjt:  ----------------------RSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT

A0A5A7V745 Serine/threonine-protein phosphatase 7 long form-like protein6.1e-2866.04Show/hide
Query:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEV
        +A QL HANDHLL GRA GS              RSNN RLRDVA+DPQQ+L ICNNN+RYMEEIH MY +PI+PP  H G V+VEE ELDEVYHNVEEV
Subjt:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEV

Query:  PLVTQT
        P +TQT
Subjt:  PLVTQT

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X23.7e-2566.29Show/hide
Query:  HGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT
        H  R   QF + ++   RSNN RLRDVADDPQQ+L ICNNN+RYMEEIH MY +PI+P P+H GR++VEE ELDEVYHNVEEVP  T+T
Subjt:  HGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT

A0A5D3BTN9 Serine/threonine-protein phosphatase 7 long form-like protein8.0e-2866.04Show/hide
Query:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEV
        +A QL HANDHLL GRA GS              RSNN RLRDVA+DPQQ+L ICNNN+RYMEEIH MY +PI+PP  H G V+VEE ELDEVYHNVEEV
Subjt:  MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEV

Query:  PLVTQT
        P  TQT
Subjt:  PLVTQT

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.8e-2581.94Show/hide
Query:  RSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT
        RSNN RLRDVADDPQQ+L ICNNNKRYMEEIH MY + I+PPPVH GRV+VEE ELDEVYHNVEEVP  TQT
Subjt:  RSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTACAACTTAGACATGCAAACGATCATCTACTATCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACCAAATCAGCTACTCATAGATCAAA
CAACAGAAGACTTCGTGATGTAGCAGATGATCCACAACAAATCCTTGTTATATGTAATAATAATAAGAGGTACATGGAGGAGATACATTATATGTACGGTGTACCTATTA
TACCTCCACCAGTTCACGCGGGACGTGTTCAAGTGGAAGAAACTGAACTCGATGAAGTTTACCATAATGTTGAAGAAGTGCCTCTAGTGACACAAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTACAACTTAGACATGCAAACGATCATCTACTATCTGGACGAGCACACGGTTCACGATGGAGAGACCAATTTTGTGTAACCAAATCAGCTACTCATAGATCAAA
CAACAGAAGACTTCGTGATGTAGCAGATGATCCACAACAAATCCTTGTTATATGTAATAATAATAAGAGGTACATGGAGGAGATACATTATATGTACGGTGTACCTATTA
TACCTCCACCAGTTCACGCGGGACGTGTTCAAGTGGAAGAAACTGAACTCGATGAAGTTTACCATAATGTTGAAGAAGTGCCTCTAGTGACACAAACATAG
Protein sequenceShow/hide protein sequence
MALQLRHANDHLLSGRAHGSRWRDQFCVTKSATHRSNNRRLRDVADDPQQILVICNNNKRYMEEIHYMYGVPIIPPPVHAGRVQVEETELDEVYHNVEEVPLVTQT