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PI0016291 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016291
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pol polyprotein
Genome locationchr09:12271328..12271947
RNA-Seq ExpressionPI0016291
SyntenyPI0016291
Gene Ontology termsGO:0090304 - nucleic acid metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAO73521.1 gag-pol polyprotein [Glycine max]3.6e-3762.9Show/hide
Query:  REGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTS--LKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTCVS
        +EG    R   LDGSNY YWKARMVAFLKS+D RTWKA++ GWEHP + D +GK +  LKPE  W+  ED  +LGNS+ALNA+ NGVD N+F+LINTC  
Subjt:  REGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTS--LKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTCVS

Query:  AKVAWEALEVTYEGTSKVKMSKLQ
        AK AWE L++T+EGTSKVK+S+LQ
Subjt:  AKVAWEALEVTYEGTSKVKMSKLQ

AAO73527.1 gag-pol polyprotein [Glycine max]1.2e-3763.71Show/hide
Query:  REGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTS--LKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTCVS
        +EG    R   LDGSNY YWKARMVAFLKS+D RTWKA++ GWEHP + D +GK +  LKPE  W+  ED  +LGNS+ALNA+ NGVD N+F+LINTC  
Subjt:  REGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTS--LKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTCVS

Query:  AKVAWEALEVTYEGTSKVKMSKLQ
        AK AWE L++T+EGTSKVKMS+LQ
Subjt:  AKVAWEALEVTYEGTSKVKMSKLQ

KAA0035422.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]4.5e-4067.46Show/hide
Query:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC
        VD  REGSSTTR   LDG+NYAYWKAR++AF+KSID + WKAM+ G EHPS  D  GK +LK EI+WS  +D A+ GNSRALNAI NGVD N+FK INTC
Subjt:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC

Query:  VSAKVAWEALEVTYEGTSKVKMSKLQ
        + AK AW  LE  YEGTSKVK+SKLQ
Subjt:  VSAKVAWEALEVTYEGTSKVKMSKLQ

KAA0065486.1 gag-proteinase polyprotein [Cucumis melo var. makuwa]3.2e-3861.9Show/hide
Query:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC
        +DG REG+STTR   LDG NY YWK+RM+AFL S+D R+WKA+++GWEHP+  DE GK + K E+ W S ED A++GNSRALN + N VD N+FKLINT 
Subjt:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC

Query:  VSAKVAWEALEVTYEGTSKVKMSKLQ
          AK AWE LEV YEGTS +KMS++Q
Subjt:  VSAKVAWEALEVTYEGTSKVKMSKLQ

XP_008464095.1 PREDICTED: uncharacterized protein LOC103502061 [Cucumis melo]4.5e-4067.46Show/hide
Query:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC
        VD  REGSSTTR   LDG+NYAYWKAR++AF+KSID + WKAM+ G EHPS  D  GK +LK EI+WS  +D A+ GNSRALNAI NGVD N+FK INTC
Subjt:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC

Query:  VSAKVAWEALEVTYEGTSKVKMSKLQ
        + AK AW  LE  YEGTSKVK+SKLQ
Subjt:  VSAKVAWEALEVTYEGTSKVKMSKLQ

TrEMBL top hitse value%identityAlignment
A0A1S3CKP5 uncharacterized protein LOC1035020612.2e-4067.46Show/hide
Query:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC
        VD  REGSSTTR   LDG+NYAYWKAR++AF+KSID + WKAM+ G EHPS  D  GK +LK EI+WS  +D A+ GNSRALNAI NGVD N+FK INTC
Subjt:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC

Query:  VSAKVAWEALEVTYEGTSKVKMSKLQ
        + AK AW  LE  YEGTSKVK+SKLQ
Subjt:  VSAKVAWEALEVTYEGTSKVKMSKLQ

A0A5A7SVY3 Gag-proteinase polyprotein2.2e-4067.46Show/hide
Query:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC
        VD  REGSSTTR   LDG+NYAYWKAR++AF+KSID + WKAM+ G EHPS  D  GK +LK EI+WS  +D A+ GNSRALNAI NGVD N+FK INTC
Subjt:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC

Query:  VSAKVAWEALEVTYEGTSKVKMSKLQ
        + AK AW  LE  YEGTSKVK+SKLQ
Subjt:  VSAKVAWEALEVTYEGTSKVKMSKLQ

A0A5A7VGN0 Gag-proteinase polyprotein1.6e-3861.9Show/hide
Query:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC
        +DG REG+STTR   LDG NY YWK+RM+AFL S+D R+WKA+++GWEHP+  DE GK + K E+ W S ED A++GNSRALN + N VD N+FKLINT 
Subjt:  VDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTC

Query:  VSAKVAWEALEVTYEGTSKVKMSKLQ
          AK AWE LEV YEGTS +KMS++Q
Subjt:  VSAKVAWEALEVTYEGTSKVKMSKLQ

Q84VH8 Gag-pol polyprotein6.0e-3863.71Show/hide
Query:  REGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTS--LKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTCVS
        +EG    R   LDGSNY YWKARMVAFLKS+D RTWKA++ GWEHP + D +GK +  LKPE  W+  ED  +LGNS+ALNA+ NGVD N+F+LINTC  
Subjt:  REGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTS--LKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTCVS

Query:  AKVAWEALEVTYEGTSKVKMSKLQ
        AK AWE L++T+EGTSKVKMS+LQ
Subjt:  AKVAWEALEVTYEGTSKVKMSKLQ

Q84VI4 Gag-pol polyprotein1.7e-3762.9Show/hide
Query:  REGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTS--LKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTCVS
        +EG    R   LDGSNY YWKARMVAFLKS+D RTWKA++ GWEHP + D +GK +  LKPE  W+  ED  +LGNS+ALNA+ NGVD N+F+LINTC  
Subjt:  REGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTS--LKPEISWSSAEDAASLGNSRALNAILNGVDYNVFKLINTCVS

Query:  AKVAWEALEVTYEGTSKVKMSKLQ
        AK AWE L++T+EGTSKVK+S+LQ
Subjt:  AKVAWEALEVTYEGTSKVKMSKLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGGATTACAGATTTTTCATGGGCTCTTTGAAAAATCAATATACGATCTCTTTGAGCGGGTTGCTGACCCCCCAAATGTAGATGCAGTTGCATCGAACTGGGTTAC
CAACAGCGTTGATGGTTTTAGAGAAGGAAGTTCAACGACCAGGTCTCTTTTCCTCGATGGATCAAACTATGCCTATTGGAAGGCTCGGATGGTGGCGTTTTTAAAATCAA
TTGACCACAGAACATGGAAGGCAATGGTGACTGGCTGGGAGCATCCCTCAGTTACTGATGAGAAAGGCAAGACTTCTCTTAAACCAGAGATATCCTGGTCAAGTGCAGAA
GATGCAGCCTCTCTAGGAAACTCAAGAGCATTGAATGCAATATTGAATGGTGTTGATTATAATGTGTTCAAGCTGATAAACACATGTGTATCAGCTAAGGTTGCATGGGA
AGCCTTGGAAGTTACCTATGAAGGCACGTCTAAAGTAAAGATGTCCAAGCTTCAATTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGGATTACAGATTTTTCATGGGCTCTTTGAAAAATCAATATACGATCTCTTTGAGCGGGTTGCTGACCCCCCAAATGTAGATGCAGTTGCATCGAACTGGGTTAC
CAACAGCGTTGATGGTTTTAGAGAAGGAAGTTCAACGACCAGGTCTCTTTTCCTCGATGGATCAAACTATGCCTATTGGAAGGCTCGGATGGTGGCGTTTTTAAAATCAA
TTGACCACAGAACATGGAAGGCAATGGTGACTGGCTGGGAGCATCCCTCAGTTACTGATGAGAAAGGCAAGACTTCTCTTAAACCAGAGATATCCTGGTCAAGTGCAGAA
GATGCAGCCTCTCTAGGAAACTCAAGAGCATTGAATGCAATATTGAATGGTGTTGATTATAATGTGTTCAAGCTGATAAACACATGTGTATCAGCTAAGGTTGCATGGGA
AGCCTTGGAAGTTACCTATGAAGGCACGTCTAAAGTAAAGATGTCCAAGCTTCAATTTTGA
Protein sequenceShow/hide protein sequence
MNGLQIFHGLFEKSIYDLFERVADPPNVDAVASNWVTNSVDGFREGSSTTRSLFLDGSNYAYWKARMVAFLKSIDHRTWKAMVTGWEHPSVTDEKGKTSLKPEISWSSAE
DAASLGNSRALNAILNGVDYNVFKLINTCVSAKVAWEALEVTYEGTSKVKMSKLQF