; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016308 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016308
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein transport protein Sec61 subunit beta
Genome locationchr11:5869308..5871770
RNA-Seq ExpressionPI0016308
SyntenyPI0016308
Gene Ontology termsGO:0006616 - SRP-dependent cotranslational protein targeting to membrane, translocation (biological process)
GO:0031204 - posttranslational protein targeting to membrane, translocation (biological process)
GO:0005784 - Sec61 translocon complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR016482 - Protein transport protein SecG/Sec61-beta/Sbh
IPR030671 - Protein transport Sec61-beta/Sbh


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605540.1 Syntaxin-71, partial [Cucurbita argyrosperma subsp. sororia]5.2e-3185.71Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARG SQSQS  +S ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSS GGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

XP_004149541.1 protein transport protein Sec61 subunit beta [Cucumis sativus]1.2e-3896.94Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARGASQSQS+TSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSS GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

XP_008463929.1 PREDICTED: protein transport protein Sec61 subunit beta [Cucumis melo]4.0e-3997.96Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARGASQSQS+TSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

XP_022958107.1 protein transport protein Sec61 subunit beta [Cucurbita moschata]5.2e-3185.71Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARG SQSQS  +S ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSS GGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

XP_038902812.1 protein transport protein Sec61 subunit beta [Benincasa hispida]2.7e-3592.86Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARG SQSQST+S  ST+RPGVVAPRGSAAATAGLRRRRPGSTSA ASTGLVGGGSS GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

TrEMBL top hitse value%identityAlignment
A0A0A0KHR1 Protein transport protein Sec61 subunit beta5.6e-3996.94Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARGASQSQS+TSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSA+ASTGLVGGGSS GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

A0A1S3CKE5 Protein transport protein Sec61 subunit beta1.9e-3997.96Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARGASQSQS+TSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

A0A5D3CTD4 Protein transport protein Sec61 subunit beta1.9e-3997.96Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARGASQSQS+TSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

A0A6J1H102 Protein transport protein Sec61 subunit beta2.5e-3185.71Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARG SQSQS  +S ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSS GGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

A0A6J1JZ65 Protein transport protein Sec61 subunit beta2.5e-3185.71Show/hide
Query:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARG SQSQS  +S ST+RPGVVAPRGSAAATAGLRRRR GSTS   +TGLV GGSS GGNMLRFYTDDAPGLKISPTVVLV+SLCFIGFVTGLHVFG
Subjt:  MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSS-GGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

SwissProt top hitse value%identityAlignment
A8I6P9 Protein transport protein Sec61 subunit beta2.1e-0644.57Show/hide
Query:  SQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        SQSQ++T      R    AP G+    AG  RRRP        +G  G   +    + FYTDD PG K+SP VV+ MSL FI FVT LHV G
Subjt:  SQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

P38389 Protein transport protein Sec61 subunit beta1.2e-1462.67Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        RGSAAATA +RRR+P       ++G  GGG+SG   G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV G
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

P60467 Protein transport protein Sec61 subunit beta1.8e-0543.18Show/hide
Query:  STTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        S T+ GS+ R    A   +A A     R+R  ++  T S G      +GG M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++G
Subjt:  STTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

P60468 Protein transport protein Sec61 subunit beta1.8e-0543.18Show/hide
Query:  STTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        S T+ GS+ R    A   +A A     R+R  ++  T S G      +GG M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++G
Subjt:  STTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

Q9CQS8 Protein transport protein Sec61 subunit beta1.8e-0543.18Show/hide
Query:  STTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        S T+ GS+ R    A   +A A     R+R  ++  T S G      +GG M RFYT+D+PGLK+ P  VLVMSL FI  V  LH++G
Subjt:  STTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

Arabidopsis top hitse value%identityAlignment
AT2G45070.1 Preprotein translocase Sec, Sec61-beta subunit protein8.6e-1662.67Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        RGSAAATA +RRR+P       ++G  GGG+SG   G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV G
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

AT2G45070.2 Preprotein translocase Sec, Sec61-beta subunit protein8.6e-1662.67Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        RGSAAATA +RRR+P       ++G  GGG+SG   G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV G
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

AT2G45070.3 Preprotein translocase Sec, Sec61-beta subunit protein8.6e-1662.67Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        RGSAAATA +RRR+P       ++G  GGG+SG   G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV G
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

AT2G45070.4 Preprotein translocase Sec, Sec61-beta subunit protein8.6e-1662.67Show/hide
Query:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        RGSAAATA +RRR+P       ++G  GGG+SG   G+ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV G
Subjt:  RGSAAATAGLRRRRPGSTSATASTGLVGGGSSG---GNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG

AT5G60460.1 Preprotein translocase Sec, Sec61-beta subunit protein1.6e-3075.51Show/hide
Query:  MARGASQSQSTTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG
        MARG+SQSQ +TS+G STARPG+ APRGSAAATAG+RRRR G     +S G  G GS   NMLRFYTDDAPGLKISPTVVL+MSLCFIGFVT LHVFG
Subjt:  MARGASQSQSTTSSG-STARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGGGGCTTCTCAATCCCAATCCACAACCTCTTCTGGCTCTACTGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCGACAGCTGGCCTCCGCCG
CCGCCGTCCCGGTTCTACTTCTGCCACCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGAAACATGCTGAGATTCTACACCGACGATGCTCCAGGCTTAAAGA
TTTCTCCCACCGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGCTTCGTCACCGGTCTCCACGTTTTTGGTTTCTCAACCAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGAGGGGCTTCTCAATCCCAATCCACAACCTCTTCTGGCTCTACTGCTAGACCTGGCGTTGTCGCTCCTCGCGGCTCTGCGGCGGCGACAGCTGGCCTCCGCCG
CCGCCGTCCCGGTTCTACTTCTGCCACCGCCTCTACTGGACTCGTAGGCGGCGGATCAAGCGGCGGAAACATGCTGAGATTCTACACCGACGATGCTCCAGGCTTAAAGA
TTTCTCCCACCGTCGTCCTCGTCATGAGCCTCTGCTTCATCGGCTTCGTCACCGGTCTCCACGTTTTTGGTTTCTCAACCAGCTAAATCGACTTCTTCTGAGATCCTTAC
GAGAAAAAGGAAATAAAAAAGGGTTTAAAATTAATTTATTTGGAAAGATTTACAATTTTGCCCAATGGGTCTCATGGTTGCATTAAATAGTATGGGTTTGGGTTGAGGGT
GTTTTTGGGTCTGATTTTTCTCCGGGGAAGTGAGACTGAAAGGATGAAGTAC
Protein sequenceShow/hide protein sequence
MARGASQSQSTTSSGSTARPGVVAPRGSAAATAGLRRRRPGSTSATASTGLVGGGSSGGNMLRFYTDDAPGLKISPTVVLVMSLCFIGFVTGLHVFGFSTS