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PI0016332 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016332
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr11:25152859..25158326
RNA-Seq ExpressionPI0016332
SyntenyPI0016332
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008234 - cysteine-type peptidase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4878.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4878.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4878.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4878.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4878.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein8.6e-4978.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

A0A5A7TU93 Gag/pol protein8.6e-4978.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

A0A5A7TWB9 Gag/pol protein8.6e-4978.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

A0A5A7V4M1 Gag/pol protein8.6e-4978.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

A0A5D3CPJ6 Gag/pol protein8.6e-4978.32Show/hide
Query:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG
        MFGQ S QI+H+A+KY+YNARM EG SVREHVL+MMV FNVAE NG VIDE SQVSFILESLP+SFLQFRSNAVMNKI YT+TTLLNELQTF+SLMK KG
Subjt:  MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKG

Query:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG
        QK GEANVA S ++F +GS+SGTKS PSSSG KK +KKKGG+G
Subjt:  QKEGEANVAHS-KRFQKGSSSGTKSAPSSSGTKKIQKKKGGKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGACAACCGTCCATTCAAATCCGGCACGAGGCTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGT
CCAATTCAACGTGGCAGAAACGAACGGGACGGTCATTGACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGG
TTATGAACAAGATAGAGTATACCATGACTACCCTCCTTAACGAGTTGCAGACTTTTCAGTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCAT
TCCAAGAGGTTTCAGAAGGGTTCATCCTCTGGAACCAAGTCTGCACCTTCATCTTCTGGGACTAAGAAAATCCAGAAGAAGAAAGGAGGAAAAGGGAAAGATTCTGTGAA
TTTATTCCGCTGCGTAAGGGCTTCAATCCCTTCACGTTTCGACCGCTGTCTTCTGGGTTTGTCTCGGGTTCACTTTTCTAGCCAGCTTGTGAAGTTAGTTCCATCGAATA
GTGTCGGTTTTGACGAAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGACAACCGTCCATTCAAATCCGGCACGAGGCTATTAAATACGTTTATAATGCCCGTATGAAGGAAGGCCAATCTGTTAGAGAACATGTTCTCGACATGATGGT
CCAATTCAACGTGGCAGAAACGAACGGGACGGTCATTGACGAGCAAAGTCAGGTATCCTTTATCTTAGAATCTCTTCCGAAGAGCTTCCTTCAATTCCGTAGCAATGCGG
TTATGAACAAGATAGAGTATACCATGACTACCCTCCTTAACGAGTTGCAGACTTTTCAGTCTCTTATGAAAAATAAGGGACAGAAAGAAGGAGAGGCAAATGTTGCCCAT
TCCAAGAGGTTTCAGAAGGGTTCATCCTCTGGAACCAAGTCTGCACCTTCATCTTCTGGGACTAAGAAAATCCAGAAGAAGAAAGGAGGAAAAGGGAAAGATTCTGTGAA
TTTATTCCGCTGCGTAAGGGCTTCAATCCCTTCACGTTTCGACCGCTGTCTTCTGGGTTTGTCTCGGGTTCACTTTTCTAGCCAGCTTGTGAAGTTAGTTCCATCGAATA
GTGTCGGTTTTGACGAAGGGTGA
Protein sequenceShow/hide protein sequence
MFGQPSIQIRHEAIKYVYNARMKEGQSVREHVLDMMVQFNVAETNGTVIDEQSQVSFILESLPKSFLQFRSNAVMNKIEYTMTTLLNELQTFQSLMKNKGQKEGEANVAH
SKRFQKGSSSGTKSAPSSSGTKKIQKKKGGKGKDSVNLFRCVRASIPSRFDRCLLGLSRVHFSSQLVKLVPSNSVGFDEG