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PI0016345 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016345
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description17 kDa phloem lectin
Genome locationchr08:11789253..11790250
RNA-Seq ExpressionPI0016345
SyntenyPI0016345
Gene Ontology termsGO:0030246 - carbohydrate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649723.1 hypothetical protein Csa_012122, partial [Cucumis sativus]6.4e-2037.66Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKEQ--
        MA Q+T  L+FPRAS+ITWGDDTRYWSW  VD C Y ++                                                    P   K++  
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKEQ--

Query:  --------DVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
                +VWFKIP+GKF+L  S T+G I+F +Y H G+WKRGLNIRAL I+A
Subjt:  --------DVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

XP_008460673.1 PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo]2.9e-2035.71Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------
        MA Q+T  +++PRA+SITW DDTRYWSW PVD CGY ++                                                             
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------

Query:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
             K+ +VWFKIP+GKF+++ S T+G I+F  Y HGGHWKRGL +RAL+I+A
Subjt:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

XP_008465821.1 PREDICTED: uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like [Cucumis melo]8.4e-2035.06Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------
        MA Q+T  +++PRA+SITW DDTRYWSW P+D CGY ++                                                             
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------

Query:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
             K+ +VWFKIP+GKF+++ S T+G I+F  Y HGGHWKRGL +RAL+I+A
Subjt:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

XP_031739683.1 lectin-like [Cucumis sativus]6.4e-2037.66Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKEQ--
        MA Q+T  L+FPRAS+ITWGDDTRYWSW  VD C Y ++                                                    P   K++  
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKEQ--

Query:  --------DVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
                +VWFKIP+GKF+L  S T+G I+F +Y H G+WKRGLNIRAL I+A
Subjt:  --------DVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

XP_031740319.1 lectin [Cucumis sativus]1.4e-1937.66Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKEQ--
        MA Q+T  L+FPRAS+ITWGDDTRYWSW  VD C Y ++                                                    P   K++  
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKEQ--

Query:  --------DVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
                +VWFKIP+GKF+L  S T+G I+F  Y H G+WKRGLNIRAL I+A
Subjt:  --------DVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

TrEMBL top hitse value%identityAlignment
A0A0A0KYP0 Phloem lectin6.9e-2037.66Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKEQ--
        MA Q+T  L+FPRAS+ITWGDDTRYWSW  VD C Y ++                                                    P   K++  
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKEQ--

Query:  --------DVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
                +VWFKIP+GKF+L  S T+G I+F  Y H G+WKRGLNIRAL I+A
Subjt:  --------DVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

A0A0A0L3U0 Uncharacterized protein2.7e-2457.61Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFCKEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
        MA  +T  L+FPRAS+ITWGDDTRYWSW  VD C         ++ +VW KIP+GKF+L  S T+G I+F +Y H G+WKRGLNIRAL I+A
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFCKEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

A0A1S3CE66 uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like1.4e-2035.71Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------
        MA Q+T  +++PRA+SITW DDTRYWSW PVD CGY ++                                                             
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------

Query:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
             K+ +VWFKIP+GKF+++ S T+G I+F  Y HGGHWKRGL +RAL+I+A
Subjt:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

A0A1S3CQ49 uncharacterized protein PHLOEM PROTEIN 2-LIKE A4-like4.1e-2035.06Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------
        MA Q+T  +++PRA+SITW DDTRYWSW P+D CGY ++                                                             
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------

Query:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
             K+ +VWFKIP+GKF+++ S T+G I+F  Y HGGHWKRGL +RAL+I+A
Subjt:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

Q8LK70 17 kDa phloem lectin6.9e-2036.36Show/hide
Query:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------
        MA Q+T  L+FPRAS+ITWGDDTRYWSW  VD C Y ++                                                             
Subjt:  MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFC---------------------------------------------------------

Query:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
             ++ +VWFKIP+GKF+L+ S T+G I+F  Y H G+WKRGLNIRAL I+A
Subjt:  -----KEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

SwissProt top hitse value%identityAlignment
P0DSP5 Lectin2.2e-1528.67Show/hide
Query:  TTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKE-------
        +T  L FPRA+++TW DDTRYWSW PVD CGY L+                                                    P   K+       
Subjt:  TTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLK----------------------------------------------------PKFCKE-------

Query:  ---QDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA
           +DVWFK+ +G  +++DS T G ++  +Y H  +WK G  +  L +EA
Subjt:  ---QDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATCAAACCACACAAATTCTATCATTTCCAAGAGCTTCCTCAATAACATGGGGTGATGACACTCGCTACTGGAGTTGGCAGCCCGTGGATTTATGCGGGTATAA
TCTTAAACCCAAATTTTGTAAGGAACAAGATGTGTGGTTCAAGATCCCGGTAGGTAAGTTCTTGTTAACTGATTCTAGTACTGCTGGACCGATTCAATTCATCATCTATC
AACATGGAGGACATTGGAAGAGAGGGTTGAACATAAGAGCCCTTGTGATTGAAGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAATCAAACCACACAAATTCTATCATTTCCAAGAGCTTCCTCAATAACATGGGGTGATGACACTCGCTACTGGAGTTGGCAGCCCGTGGATTTATGCGGGTATAA
TCTTAAACCCAAATTTTGTAAGGAACAAGATGTGTGGTTCAAGATCCCGGTAGGTAAGTTCTTGTTAACTGATTCTAGTACTGCTGGACCGATTCAATTCATCATCTATC
AACATGGAGGACATTGGAAGAGAGGGTTGAACATAAGAGCCCTTGTGATTGAAGCATAA
Protein sequenceShow/hide protein sequence
MANQTTQILSFPRASSITWGDDTRYWSWQPVDLCGYNLKPKFCKEQDVWFKIPVGKFLLTDSSTAGPIQFIIYQHGGHWKRGLNIRALVIEA