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PI0016347 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016347
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionhippocampus abundant transcript 1 protein-like
Genome locationchr03:4889241..4889910
RNA-Seq ExpressionPI0016347
SyntenyPI0016347
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015276 - ligand-gated ion channel activity (molecular function)
GO:0038023 - signaling receptor activity (molecular function)
InterPro domainsIPR036259 - MFS transporter superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064854.1 tetracycline resistance protein, class A-like isoform X1 [Cucumis melo var. makuwa]6.3e-4879.7Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M E+ KL HLLVTVFLYTFATMTAFPAIPDVTMSALCP +               VTGVGALLM+PLLGNLSDKFGRKTVLTIPL+L +IPLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

XP_008445315.1 PREDICTED: tetracycline resistance protein, class A-like isoform X1 [Cucumis melo]6.3e-4879.7Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M E+ KL HLLVTVFLYTFATMTAFPAIPDVTMSALCP +               VTGVGALLM+PLLGNLSDKFGRKTVLTIPL+L +IPLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

XP_031736457.1 hippocampus abundant transcript 1 protein [Cucumis sativus]2.4e-4778.95Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M E  KL HLLVTVFLYTFATMTAFPAIPD+TMSALCP +               VTG+GALLMMPLLGNLSD+FGRKTVLTIPLVL IIPLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        R+LFYIYFVFKCVTSIVCEGSVQCLAVAYA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

XP_038886440.1 hippocampus abundant transcript 1 protein-like isoform X2 [Benincasa hispida]6.5e-4574.44Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M EIWKL+HLLVTVFLYTFATM   PAI DVTMSALCP +               VTG+GALLMMPLLGNLSDKFGRKT+LTIP+VLT+IPLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        RDLFYIYFV KCVTS +CEGSVQCLA+ YA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

XP_038886441.1 hippocampus abundant transcript 1 protein-like isoform X3 [Benincasa hispida]6.5e-4574.44Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M EIWKL+HLLVTVFLYTFATM   PAI DVTMSALCP +               VTG+GALLMMPLLGNLSDKFGRKT+LTIP+VLT+IPLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        RDLFYIYFV KCVTS +CEGSVQCLA+ YA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

TrEMBL top hitse value%identityAlignment
A0A0A0LKE2 MFS domain-containing protein5.2e-4879.26Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M E  KL HLLVTVFLYTFATMTAFPAIPD+TMSALCP +               VTG+GALLMMPLLGNLSD+FGRKTVLTIPLVL IIPLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRNFL
        R+LFYIYFVFKCVTSIVCEGSVQCLAVAYAV N L
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRNFL

A0A0A0LN87 MFS domain-containing protein3.5e-4472.18Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M EIWKL+HLLVT+FLYTFATM   PAI DVTMSALCP +               V G+GALLMMPLLGNLSDK GRKT+LTIP++LT++PLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        R+LFY+YFV KCVTSIVCEGSVQCLAVAYA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

A0A1S3BCD2 hippocampus abundant transcript 1 protein-like7.8e-4470.68Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCP-------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M EIWKL+HLL+TVFLYTFATM   PAI DVTMSALCP             ++  VTG+G+LLMMPLLGNLSDKFGRKTVLTIP++L ++PLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCP-------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        R  +Y+YFV KCVTSI+CEGSVQCLAVAYA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

A0A1S3BD51 tetracycline resistance protein, class A-like isoform X13.1e-4879.7Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M E+ KL HLLVTVFLYTFATMTAFPAIPDVTMSALCP +               VTGVGALLM+PLLGNLSDKFGRKTVLTIPL+L +IPLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

A0A5A7VC62 Tetracycline resistance protein, class A-like isoform X13.1e-4879.7Show/hide
Query:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS
        M E+ KL HLLVTVFLYTFATMTAFPAIPDVTMSALCP +               VTGVGALLM+PLLGNLSDKFGRKTVLTIPL+L +IPLGILGYGRS
Subjt:  MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTN-------------VTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRS

Query:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        RDLFYIYFVFKCVTSIVCEGSVQCLAVAYA  N
Subjt:  RDLFYIYFVFKCVTSIVCEGSVQCLAVAYAVRN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G16970.1 Major facilitator superfamily protein8.9e-1639.25Show/hide
Query:  KLNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLF
        +L HLL TVFL  F+     P + DVT++A+C               V+    G+G ++MMP++GNLSD++G KT+LT+P+ L+I+P  IL Y R  + F
Subjt:  KLNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLF

Query:  YIYFVFK
        Y +++ K
Subjt:  YIYFVFK

AT2G16980.1 Major facilitator superfamily protein1.7e-2240.31Show/hide
Query:  KLNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLF
        +L HLLVTVFL   A     P + DVT++A+C               V+    G+G ++MMP++GNLSD++G K +LT+P+ L+++P  ILGY R  + F
Subjt:  KLNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLF

Query:  YIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        Y ++V K +  +VC+G++ CLA AY  +N
Subjt:  YIYFVFKCVTSIVCEGSVQCLAVAYAVRN

AT2G16980.2 Major facilitator superfamily protein1.7e-2240.31Show/hide
Query:  KLNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLF
        +L HLLVTVFL   A     P + DVT++A+C               V+    G+G ++MMP++GNLSD++G K +LT+P+ L+++P  ILGY R  + F
Subjt:  KLNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLF

Query:  YIYFVFKCVTSIVCEGSVQCLAVAYAVRN
        Y ++V K +  +VC+G++ CLA AY  +N
Subjt:  YIYFVFKCVTSIVCEGSVQCLAVAYAVRN

AT2G16990.1 Major facilitator superfamily protein8.0e-2543.61Show/hide
Query:  LNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLFY
        L H+L TVFL  FA     P I DVT++A+C                +    G+G ++MMP++GNLSD++G KT+LT+P+ L+I+P  ILGY R    FY
Subjt:  LNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLFY

Query:  IYFVFKCVTSIVCEGSVQCLAVAYAVRNFLTST
        ++++ K +TS+VCEG+V CLA AY   N   ST
Subjt:  IYFVFKCVTSIVCEGSVQCLAVAYAVRNFLTST

AT2G16990.2 Major facilitator superfamily protein8.0e-2543.61Show/hide
Query:  LNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLFY
        L H+L TVFL  FA     P I DVT++A+C                +    G+G ++MMP++GNLSD++G KT+LT+P+ L+I+P  ILGY R    FY
Subjt:  LNHLLVTVFLYTFATMTAFPAIPDVTMSALCP--------------VKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLFY

Query:  IYFVFKCVTSIVCEGSVQCLAVAYAVRNFLTST
        ++++ K +TS+VCEG+V CLA AY   N   ST
Subjt:  IYFVFKCVTSIVCEGSVQCLAVAYAVRNFLTST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAAATTTGGAAGCTAAACCATTTGTTGGTGACAGTATTTCTATACACTTTTGCAACCATGACGGCGTTTCCTGCCATTCCAGATGTCACCATGTCCGCTCTGTG
TCCGGTCAAGACGAATGTGACTGGAGTTGGTGCATTGTTAATGATGCCATTGCTTGGAAATCTCTCGGATAAGTTCGGGAGGAAGACTGTTCTCACCATTCCCTTGGTTT
TGACTATAATTCCACTCGGGATATTGGGATATGGGAGGTCGAGGGATTTGTTCTACATTTATTTTGTGTTCAAGTGTGTGACAAGCATAGTTTGTGAAGGGAGCGTTCAG
TGCTTGGCCGTTGCCTATGCAGTAAGAAACTTTCTCACATCAACTAATTTTGAATATATTTTTTTCAAAGTTAAATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAAATTTGGAAGCTAAACCATTTGTTGGTGACAGTATTTCTATACACTTTTGCAACCATGACGGCGTTTCCTGCCATTCCAGATGTCACCATGTCCGCTCTGTG
TCCGGTCAAGACGAATGTGACTGGAGTTGGTGCATTGTTAATGATGCCATTGCTTGGAAATCTCTCGGATAAGTTCGGGAGGAAGACTGTTCTCACCATTCCCTTGGTTT
TGACTATAATTCCACTCGGGATATTGGGATATGGGAGGTCGAGGGATTTGTTCTACATTTATTTTGTGTTCAAGTGTGTGACAAGCATAGTTTGTGAAGGGAGCGTTCAG
TGCTTGGCCGTTGCCTATGCAGTAAGAAACTTTCTCACATCAACTAATTTTGAATATATTTTTTTCAAAGTTAAATCATAA
Protein sequenceShow/hide protein sequence
MGEIWKLNHLLVTVFLYTFATMTAFPAIPDVTMSALCPVKTNVTGVGALLMMPLLGNLSDKFGRKTVLTIPLVLTIIPLGILGYGRSRDLFYIYFVFKCVTSIVCEGSVQ
CLAVAYAVRNFLTSTNFEYIFFKVKS