; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016361 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016361
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationchr09:20843388..20845541
RNA-Seq ExpressionPI0016361
SyntenyPI0016361
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607551.1 Chlorophyll a-b binding protein CP26, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.0e-15295.19Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPS-KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSA SASSP T K VALFGKKPAP+ KPKPSA SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPS-KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_004141516.1 chlorophyll a-b binding protein CP26, chloroplastic [Cucumis sativus]2.4e-15898.26Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
        MASLAASTAAASLGVSEMLRNPLSFSSRSAPS S+PATFKTVALFGKKP AP+KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD

Query:  YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN
        YGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN
Subjt:  YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN

Query:  GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_008459494.1 PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Cucumis melo]1.2e-15798.62Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA-PSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAASTAAASLGVSEMLRNPLSFSSRSA PSASSPATFKTVALFGKKP APSKPKP+ ASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA-PSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
        DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
Subjt:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII

Query:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_022932496.1 chlorophyll a-b binding protein CP26, chloroplastic-like [Cucurbita moschata]2.0e-15295.19Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPS-KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSA SASSP T K VALFGKKPAP+ KPKPSA SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPS-KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

XP_038889943.1 chlorophyll a-b binding protein CP26, chloroplastic [Benincasa hispida]1.6e-15797.94Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSAPSASSPATFKTVALFGKKP APSKPKPSA SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

TrEMBL top hitse value%identityAlignment
A0A0A0KXR5 Chlorophyll a-b binding protein, chloroplastic1.2e-15898.26Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
        MASLAASTAAASLGVSEMLRNPLSFSSRSAPS S+PATFKTVALFGKKP AP+KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSAPSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGD

Query:  YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN
        YGYDPFGLSKKPEDF+KYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN
Subjt:  YGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIIN

Query:  GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  GLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A1S3CBI9 Chlorophyll a-b binding protein, chloroplastic5.8e-15898.62Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSFSSRSA-PSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
        MASLAASTAAASLGVSEMLRNPLSFSSRSA PSASSPATFKTVALFGKKP APSKPKP+ ASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG
Subjt:  MASLAASTAAASLGVSEMLRNPLSFSSRSA-PSASSPATFKTVALFGKKP-APSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPG

Query:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
        DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII
Subjt:  DYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRII

Query:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
Subjt:  NGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1DTI7 Chlorophyll a-b binding protein, chloroplastic4.8e-15295.88Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPSKPKPSAA-SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S RSAPSASS  T KTVALFGKKPA +K KPSAA SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPSKPKPSAA-SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGN ERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1EWI5 Chlorophyll a-b binding protein, chloroplastic9.7e-15395.19Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPS-KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLSF   S+RSA SASSP T K VALFGKKPAP+ KPKPSA SP NDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPS-KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

A0A6J1ID20 Chlorophyll a-b binding protein, chloroplastic8.2e-15294.5Show/hide
Query:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPS-KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
        MASLAASTAAASLGVSEMLRNPLS    S+RSA SASSP T K VA+FGKKPA + KPKPSA SPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV
Subjt:  MASLAASTAAASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFGKKPAPS-KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV

Query:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR
        PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAV+AEVVLVGGAEYYR
Subjt:  PGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYR

Query:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPF NNLLTVISGNAERVPTL
Subjt:  IINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

SwissProt top hitse value%identityAlignment
P12330 Chlorophyll a-b binding protein 1, chloroplastic5.6e-5750.93Show/hide
Query:  AAASLGVSEMLRNPLSFSSRSAPSASSPATFKTVALFGKKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS
        AAA++ +S  +       +R+APS SS A F    +  +K A +KPKP+A+S      + WYG DR ++L  G L   E P YL GE PGDYG+D  GLS
Subjt:  AAASLGVSEMLRNPLSFSSRSAPSASSPATFKTVALFGKKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLS

Query:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE-
          PE F+K +  E+IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YRI  G   E 
Subjt:  KKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE-

Query:  -DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
         D L+PGG FDPLGLADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  -DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P12331 Chlorophyll a-b binding protein 2, chloroplastic1.8e-5550.39Show/hide
Query:  SAPSASSPATFKTVALFGK-----KPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELI
        S+P+ +  A  K   +FG+     + + +KPKP+A+       + WYG DR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E+I
Subjt:  SAPSASSPATFKTVALFGK-----KPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELI

Query:  HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGL
        H+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPLGL
Subjt:  HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGL

Query:  ADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        ADDP+  A LKVKEIKNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  ADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27497 Chlorophyll a-b binding protein M9, chloroplastic2.8e-5651.06Show/hide
Query:  ALFGKKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFN
        +LFG+     +   + A P     + WYGPDR ++L  G L   E P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G + PE   
Subjt:  ALFGKKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFN

Query:  KFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR
        + G   G EAVWFK G+ +     L+Y GN   I    I+A+ A +VVL+G  E YR+  G   E  D L+PGG FDPLGLADDP+  A +KVKE+KNGR
Subjt:  KFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGR

Query:  LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        LAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  LAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

P27517 Chlorophyll a-b binding protein of LHCII type I, chloroplastic5.6e-5754.03Show/hide
Query:  KWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL
        ++YGPDR  FL  G    ++ PEYL GE PGDYG+D  GLS  P+ F++Y+  ELIHARWA+LGA G + PE  +++      E VWFK GA +     L
Subjt:  KWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTL

Query:  NYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVEN
        NY GN   I   ++I  +  +VVL+G AE YR   G    L+  D L+PGGPFDPLGLADDPD  A LKVKEIKNGRLAMF+ LGF+ QA VTG+GPV+N
Subjt:  NYFGNNIPI---NLIVAVIAEVVLVGGAEYYRIING----LNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVEN

Query:  LAKHLSDPFGN
        L  HL+DP  N
Subjt:  LAKHLSDPFGN

Q9XF89 Chlorophyll a-b binding protein CP26, chloroplastic5.1e-13585.05Show/hide
Query:  ASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFG-KKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SAP ASSP+TFKTVALF  KKPAP+K K  A S  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFG-KKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 37.8e-5450.66Show/hide
Query:  SKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        +KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F++ +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  SKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        AVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M G
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLSDPFGNN
        F+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FYFQAYVTGEGPVENLAKHLSDPFGNN

AT1G29920.1 chlorophyll A/B-binding protein 27.8e-5450.66Show/hide
Query:  SKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE
        +KPK  + SP       WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F++ +  E+IH+RWAMLGA G + PE   + G   G E
Subjt:  SKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPE

Query:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG
        AVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+  NG     ED L+PGG FDPLGLA DP+  A LKVKE+KNGRLAMF+M G
Subjt:  AVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRII-NGL--NFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLG

Query:  FYFQAYVTGEGPVENLAKHLSDPFGNN
        F+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  FYFQAYVTGEGPVENLAKHLSDPFGNN

AT2G05100.1 photosystem II light harvesting complex gene 2.18.6e-5353.11Show/hide
Query:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN
        WYGPDR  +L          P YL GE PGDYG+D  GLS  PE F+K +  E+IH+RWAMLGA G   PE  +K G   G EAVWFK G+ +     L+
Subjt:  WYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLN

Query:  YFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK
        Y GN   I    I+A+ A +VVL+G  E YRI  G   E  D L+PGG FDPL LA+DP+  + LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENL  
Subjt:  YFGNN--IPINLIVAVIA-EVVLVGGAEYYRIINGLNFE--DKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAK

Query:  HLSDPFGNN
        HL+DP  NN
Subjt:  HLSDPFGNN

AT2G34420.1 photosystem II light harvesting complex gene B1B26.6e-5346.88Show/hide
Query:  ASSPATFKTVALFGK--KPAPS--------KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFEL
        ASS     + A  GK  KPA S          + + A P     + WYG DR  +L        E P YL GE PGDYG+D  GLS  PE F++ +  E+
Subjt:  ASSPATFKTVALFGK--KPAPS--------KPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFSKYQAFEL

Query:  IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIING---LNFEDKLHPGGPFDPL
        IH+RWAMLGA G + PE   + G   G EAVWFK G+ +     L+Y GN   +    I+A+ A +V+L+G  E YR+         ED L+PGG FDPL
Subjt:  IHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNN--IPINLIVAVIA-EVVLVGGAEYYRIING---LNFEDKLHPGGPFDPL

Query:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN
        GLA DP+  A LKVKE+KNGRLAMF+M GF+ QA VTG+GP+ENLA HL+DP  NN
Subjt:  GLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNN

AT4G10340.1 light harvesting complex of photosystem II 53.6e-13685.05Show/hide
Query:  ASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFG-KKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG
        ASLGVSEML  PL+F   S  SAP ASSP+TFKTVALF  KKPAP+K K  A S  +DELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV GDYGYDPFG
Subjt:  ASLGVSEMLRNPLSF---SSRSAPSASSPATFKTVALFG-KKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFG

Query:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK
        L KKPE+F+KYQAFELIHARWAMLGAAGFIIPEA NK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPINL++AV+AEVVL+GGAEYYRI NGL+FEDK
Subjt:  LSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDK

Query:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL
        LHPGGPFDPLGLA DP+Q A+LKVKEIKNGRLAMFAMLGF+ QAYVTGEGPVENLAKHLSDPFGNNLLTVI+G AER PTL
Subjt:  LHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTTGGCAGCTTCCACCGCCGCCGCCTCCCTCGGCGTCTCCGAAATGCTAAGAAATCCTCTTAGCTTCTCCTCTAGGTCTGCTCCCTCGGCTTCTAGCCCGGC
CACCTTCAAAACAGTTGCGCTTTTCGGTAAGAAGCCCGCACCATCCAAGCCAAAGCCCTCCGCCGCCTCTCCGGTCAACGACGAGCTCGCCAAGTGGTATGGTCCGGACA
GAAGGATTTTCTTGCCAGATGGTTTGTTGGACCGATCGGAGATCCCCGAGTACTTGAACGGAGAAGTCCCCGGCGACTATGGTTATGACCCCTTTGGACTCAGCAAGAAG
CCAGAAGACTTCAGCAAATACCAAGCATTTGAATTGATTCATGCAAGATGGGCTATGCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGCGCCAA
CTGTGGCCCTGAGGCTGTCTGGTTCAAGACTGGAGCTCTACTTCTTGATGGAAACACATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCTGTCATTG
CTGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAACGGCTTGAACTTTGAGGACAAGCTTCACCCGGGAGGGCCATTCGACCCATTGGGGTTAGCAGAC
GACCCAGACCAGGCAGCAATCTTGAAGGTGAAAGAGATCAAGAATGGAAGATTGGCAATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCC
AGTGGAGAATTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAATTTGCTCACAGTCATTTCAGGGAATGCTGAAAGAGTTCCAACTCTTTAA
mRNA sequenceShow/hide mRNA sequence
CACCATTTACACAATTTTCATTCTTCTTTCTTCAATCCTTCATCCTCTCCGCCCATGGCTTCTTTGGCAGCTTCCACCGCCGCCGCCTCCCTCGGCGTCTCCGAAATGCT
AAGAAATCCTCTTAGCTTCTCCTCTAGGTCTGCTCCCTCGGCTTCTAGCCCGGCCACCTTCAAAACAGTTGCGCTTTTCGGTAAGAAGCCCGCACCATCCAAGCCAAAGC
CCTCCGCCGCCTCTCCGGTCAACGACGAGCTCGCCAAGTGGTATGGTCCGGACAGAAGGATTTTCTTGCCAGATGGTTTGTTGGACCGATCGGAGATCCCCGAGTACTTG
AACGGAGAAGTCCCCGGCGACTATGGTTATGACCCCTTTGGACTCAGCAAGAAGCCAGAAGACTTCAGCAAATACCAAGCATTTGAATTGATTCATGCAAGATGGGCTAT
GCTTGGAGCTGCTGGTTTCATCATCCCTGAGGCCTTCAACAAATTCGGCGCCAACTGTGGCCCTGAGGCTGTCTGGTTCAAGACTGGAGCTCTACTTCTTGATGGAAACA
CATTGAATTACTTTGGAAACAACATTCCCATCAACCTCATCGTCGCTGTCATTGCTGAGGTTGTTCTTGTTGGTGGCGCTGAATATTACAGAATCATCAACGGCTTGAAC
TTTGAGGACAAGCTTCACCCGGGAGGGCCATTCGACCCATTGGGGTTAGCAGACGACCCAGACCAGGCAGCAATCTTGAAGGTGAAAGAGATCAAGAATGGAAGATTGGC
AATGTTTGCAATGCTAGGGTTTTACTTCCAAGCATATGTGACAGGAGAAGGGCCAGTGGAGAATTTGGCAAAGCATTTGAGTGATCCTTTTGGAAACAATTTGCTCACAG
TCATTTCAGGGAATGCTGAAAGAGTTCCAACTCTTTAAATCAATGAATGAATGGATCAATGCATTCATTTTAAAAGTCACAACCTAATCACAAGTTTGTGTATTGAAGGA
TGAAAAATCTTGAATGCTTTTGTAAATTGGTATTGAGACTATTTGTAGCCCCTGACTACTCAACTCTTGCATTTGAAAGAGATATGAACAAGGAGTTAAGATCAAATTTT
TCTATC
Protein sequenceShow/hide protein sequence
MASLAASTAAASLGVSEMLRNPLSFSSRSAPSASSPATFKTVALFGKKPAPSKPKPSAASPVNDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKK
PEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLAD
DPDQAAILKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL