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PI0016366 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016366
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr06:25967968..25969016
RNA-Seq ExpressionPI0016366
SyntenyPI0016366
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038951.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.8e-2277.46Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS
        V DDPQQVL+I NN +RYMEE+H MY + IVP PVHR R +VEEAELDEVYHNVE+VPP TQTQSQTGYGS
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS

KAA0040602.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.9e-2278.08Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLI
        V DDPQQVLDI NN  RYMEE+H MY V IVPLPVHR R +VEEAELDEVYHNVE+VP  TQTQSQT YGSL+
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLI

KAA0064245.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]2.1e-2378.08Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLI
        V DDPQQVLDI NN ERYMEE+H MY + IVPLP+HR R +VEEAELDEVYHNVE+VPP T+TQSQTGYGSL+
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLI

TYK11193.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]8.8e-2277.46Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS
        V DDPQQVL+I NN +RYMEE+H MY + IVP PVHR R +VEEAELDEVYHNVE+VPP TQTQSQTGYGS
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]6.7e-2277.46Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS
        V +DPQQVLDI NN ERYME++H +Y + IVP PVHRER +VEEAELDEVYHNVE+VPP TQTQSQTGYGS
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS

TrEMBL top hitse value%identityAlignment
A0A5A7TBF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.2e-2277.46Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS
        V DDPQQVL+I NN +RYMEE+H MY + IVP PVHR R +VEEAELDEVYHNVE+VPP TQTQSQTGYGS
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS

A0A5A7VEC1 GATA zinc finger domain-containing protein 10-like isoform X21.0e-2378.08Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLI
        V DDPQQVLDI NN ERYMEE+H MY + IVPLP+HR R +VEEAELDEVYHNVE+VPP T+TQSQTGYGSL+
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLI

A0A5D3C2V9 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-2278.08Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLI
        V DDPQQVLDI NN  RYMEE+H MY V IVPLPVHR R +VEEAELDEVYHNVE+VP  TQTQSQT YGSL+
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLI

A0A5D3CH23 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.2e-2277.46Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS
        V DDPQQVL+I NN +RYMEE+H MY + IVP PVHR R +VEEAELDEVYHNVE+VPP TQTQSQTGYGS
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein3.3e-2277.46Show/hide
Query:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS
        V +DPQQVLDI NN ERYME++H +Y + IVP PVHRER +VEEAELDEVYHNVE+VPP TQTQSQTGYGS
Subjt:  VYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTCCACAACTTCAACATGCCAATGATCATCTACTACCTGGACGGGTATACGATGATCCACAACAAGTTCTTGATATATCCAATAATTATGAAAGGTACATGGAAGA
GCTACATTATATGTATGGTGTACTTATTGTACCTCTACCAGTTCATAGGGAACGTGCTCAAGTGGAAGAAGCTGAACTTGATGAAGTTTACCATAATGTGGAAAAGGTGC
CTCCTATGACACAGACCCAGAGCCAGACTGGTTATGGTAGTCTGATTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTCCACAACTTCAACATGCCAATGATCATCTACTACCTGGACGGGTATACGATGATCCACAACAAGTTCTTGATATATCCAATAATTATGAAAGGTACATGGAAGA
GCTACATTATATGTATGGTGTACTTATTGTACCTCTACCAGTTCATAGGGAACGTGCTCAAGTGGAAGAAGCTGAACTTGATGAAGTTTACCATAATGTGGAAAAGGTGC
CTCCTATGACACAGACCCAGAGCCAGACTGGTTATGGTAGTCTGATTCTTTGA
Protein sequenceShow/hide protein sequence
MTPQLQHANDHLLPGRVYDDPQQVLDISNNYERYMEELHYMYGVLIVPLPVHRERAQVEEAELDEVYHNVEKVPPMTQTQSQTGYGSLIL