CuGenDBv2

Gene ID	PI0016370
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Prolyl-tRNA synthetase
Genome location	chr11:7983221..7983622
RNA-Seq Expression	PI0016370
Synteny	PI0016370
Gene Ontology terms	GO:0006433 - prolyl-tRNA aminoacylation (biological process) GO:0006809 - nitric oxide biosynthetic process (biological process) GO:0042128 - nitrate assimilation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0004827 - proline-tRNA ligase activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0009703 - nitrate reductase (NADH) activity (molecular function) GO:0020037 - heme binding (molecular function) GO:0030151 - molybdenum ion binding (molecular function) GO:0043546 - molybdopterin cofactor binding (molecular function) GO:0050464 - nitrate reductase (NADPH) activity (molecular function) GO:0071949 - FAD binding (molecular function)
InterPro domains	IPR004499 - Proline-tRNA ligase, class IIa, archaeal-type IPR016061 - Proline-tRNA ligase, class II, C-terminal IPR017449 - Prolyl-tRNA synthetase, class II

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0050272.1 proline--tRNA ligase [Cucumis melo var. makuwa]

2.3e-22

96.23

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

KGN50982.2 hypothetical protein Csa_004679 [Cucumis sativus]

1.0e-22

98.11

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        QEVEKDVKTRTKGE+GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

XP_008466310.1 PREDICTED: proline--tRNA ligase, cytoplasmic isoform X1 [Cucumis melo]

2.3e-22

96.23

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

XP_008466343.1 PREDICTED: proline--tRNA ligase, cytoplasmic isoform X4 [Cucumis melo]

2.3e-22

96.23

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

XP_022979761.1 proline--tRNA ligase, cytoplasmic-like [Cucurbita maxima]

2.0e-21

94.34

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQP LPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CR78 Prolyl-tRNA synthetase

1.1e-22

96.23

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

A0A1S4DS87 Prolyl-tRNA synthetase

1.1e-22

96.23

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

A0A5A7U355 Prolyl-tRNA synthetase

1.1e-22

96.23

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

A0A6J1IRP0 Prolyl-tRNA synthetase

9.5e-22

94.34

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQP LPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

A0A6J1JLY7 Prolyl-tRNA synthetase

9.5e-22

94.34

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVEKDVKTRTKGE+GAAKTLCSPFEQP LPEGTKCFASGKPAKKWSYWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

SwissProt top hits

e value

%identity

Alignment

Q8I5R7 Proline--tRNA ligase

2.6e-08

46.67

Show/hide

Query:  QEVEKDVK----TRTKGEV---GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +E++K+ +     +T  E    GA K LC P +QPP+P   KCF SGKPAK+W  +GRSY
Subjt:  QEVEKDVK----TRTKGEV---GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

Q9M1R2 Proline--tRNA ligase, cytoplasmic

9.1e-22

84.91

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVE+DVK RTKGE GAAKTLCSPF+QP LPEGT CFASGKPAKKW+YWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

Arabidopsis top hits

e value

%identity

Alignment

AT3G62120.1 Class II aaRS and biotin synthetases superfamily protein

6.5e-23

84.91

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVE+DVK RTKGE GAAKTLCSPF+QP LPEGT CFASGKPAKKW+YWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

AT3G62120.2 Class II aaRS and biotin synthetases superfamily protein

6.5e-23

84.91

Show/hide

Query:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        +EVE+DVK RTKGE GAAKTLCSPF+QP LPEGT CFASGKPAKKW+YWGRSY
Subjt:  QEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

AT5G10880.1 tRNA synthetase-related / tRNA ligase-related

2.4e-17

71.93

Show/hide

Query:  EVEKDVKTRTKGEV-----GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY
        EVEKDVK RT+G+      G AKTLC+P EQP L E T CFASGKPAKKWSYWGRSY
Subjt:  EVEKDVKTRTKGEV-----GAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGATAAGTTTTCTGAAATCTGAAGTATTTAATATATTTGTTGTATTCCAACCTCTATCATTTACTAGTGTATTTCTAAAGAATGATGGTTTCATTGTTTTGTTCCT
CCAGGAGGTCGAGAAGGATGTGAAAACAAGGACTAAAGGTGAGGTGGGAGCAGCGAAAACCTTATGTTCCCCGTTCGAGCAGCCTCCCCTTCCAGAAGGTACCAAATGTT
TTGCATCTGGGAAGCCTGCAAAGAAATGGAGCTATTGGGGTCGGAGCTACTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEISFLKSEVFNIFVVFQPLSFTSVFLKNDGFIVLFLQEVEKDVKTRTKGEVGAAKTLCSPFEQPPLPEGTKCFASGKPAKKWSYWGRSY

PI0016370 (gene) of Melon (PI 482460) v1 genome