; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016375 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016375
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionNuclear polyadenylated RNA-binding protein 3-like
Genome locationchr01:5845383..5846966
RNA-Seq ExpressionPI0016375
SyntenyPI0016375
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033784.1 nuclear polyadenylated RNA-binding protein 3-like [Cucumis melo var. makuwa]2.4e-9095.19Show/hide
Query:  MEAISGSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFLH
        MEA+SG SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGN GEEQGENYSVDDNVS+DLRE ISPVLAVPISLVEDRIDGSLEDA FLH
Subjt:  MEAISGSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFLH

Query:  NQVEDGFAYGYNDAEEEDEVDDD-EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        NQ EDGFAYGY+DAEEEDEVDDD EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  NQVEDGFAYGYNDAEEEDEVDDD-EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_008448068.1 PREDICTED: uncharacterized protein LOC103490356 [Cucumis melo]1.6e-8991.75Show/hide
Query:  MEAISG-------SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSL
        MEA+SG       SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGN GEEQGENYSVDDNVS+DLRE ISPVLAVPISLVEDRIDGSL
Subjt:  MEAISG-------SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSL

Query:  EDAYFLHNQVEDGFAYGYNDAEEEDEVDD-DEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        EDA FLHNQ EDGFAYGY+DAEEEDEVDD +EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  EDAYFLHNQVEDGFAYGYNDAEEEDEVDD-DEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_011658549.2 uncharacterized protein LOC101212092 [Cucumis sativus]6.3e-9195.72Show/hide
Query:  MEAISG-SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFL
        MEAISG SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGN GEEQG N SVDDNVS+DLRE ISPVLAVPISLVEDRID SLEDAYFL
Subjt:  MEAISG-SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFL

Query:  HNQVEDGFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        HNQ EDGFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  HNQVEDGFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_023553634.1 histone H2A.Z-specific chaperone CHZ1-like [Cucurbita pepo subsp. pepo]7.8e-7377.04Show/hide
Query:  MEAISG-SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFL
        MEA+SG SSSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GN GE++G+N  V   + EDLRE ISPV+ VPISL EDRI   LED YFL
Subjt:  MEAISG-SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFL

Query:  HNQVEDGFAYGYNDAEE---------EDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
         N  EDGFAYGYNDAEE         +D+ DDDEDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  HNQVEDGFAYGYNDAEE---------EDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

XP_038886897.1 uncharacterized protein LOC120077100 [Benincasa hispida]1.5e-7684.74Show/hide
Query:  MEAISGSSSSSS-SMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFL
        MEAISGSSSSSS S  FVF DDFEYEFVEDIERLSNWELLDAFDADSEM GN  EEQGEN SVDD V EDLRE I     VPISLVEDRIDGSLED +FL
Subjt:  MEAISGSSSSSS-SMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFL

Query:  HNQVEDGFAYGYNDA---EEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
         NQ ED FAYGYND+   EEE+E+D D+DEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  HNQVEDGFAYGYNDA---EEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

TrEMBL top hitse value%identityAlignment
A0A0A0K4F3 Uncharacterized protein3.1e-9195.72Show/hide
Query:  MEAISG-SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFL
        MEAISG SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGN GEEQG N SVDDNVS+DLRE ISPVLAVPISLVEDRID SLEDAYFL
Subjt:  MEAISG-SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFL

Query:  HNQVEDGFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        HNQ EDGFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  HNQVEDGFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A1S3BJG2 uncharacterized protein LOC1034903567.5e-9091.75Show/hide
Query:  MEAISG-------SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSL
        MEA+SG       SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGN GEEQGENYSVDDNVS+DLRE ISPVLAVPISLVEDRIDGSL
Subjt:  MEAISG-------SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSL

Query:  EDAYFLHNQVEDGFAYGYNDAEEEDEVDD-DEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        EDA FLHNQ EDGFAYGY+DAEEEDEVDD +EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  EDAYFLHNQVEDGFAYGYNDAEEEDEVDD-DEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A5A7SRG7 Nuclear polyadenylated RNA-binding protein 3-like1.2e-9095.19Show/hide
Query:  MEAISGSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFLH
        MEA+SG SSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGN GEEQGENYSVDDNVS+DLRE ISPVLAVPISLVEDRIDGSLEDA FLH
Subjt:  MEAISGSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFLH

Query:  NQVEDGFAYGYNDAEEEDEVDDD-EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        NQ EDGFAYGY+DAEEEDEVDDD EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  NQVEDGFAYGYNDAEEEDEVDDD-EDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A6J1I004 uncharacterized protein LOC1114684627.1e-7276.02Show/hide
Query:  MEAISG----SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDA
        MEA+SG    SSSSSSS+EF FYDDFEYEFVED+ERLSNWE L+A DADSEM GN GE++G+N  V   + EDL E ISPV+ VPISL EDRI   LED 
Subjt:  MEAISG----SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDA

Query:  YFLHNQVEDGFAYGYNDAEEED------EVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY
        YFL N  EDGFAYGYNDAEE++      + DDDEDE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKHSY
Subjt:  YFLHNQVEDGFAYGYNDAEEED------EVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY

A0A6J1I229 NAD-dependent protein deacetylase HST1-like1.0e-6271.14Show/hide
Query:  MEAISG---SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGN------EGEEQGENYSVDDNVSEDLRETISPVLAVPI-SLVEDRID
        MEA+SG   SSSSSSS+EFVF+DD EYEFVE++ERLSNWELLDA DAD E+ GN      E EE+ EN SVD  V +DLR     V+A+PI SLVE+RID
Subjt:  MEAISG---SSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGN------EGEEQGENYSVDDNVSEDLRETISPVLAVPI-SLVEDRID

Query:  GSLEDAYFLHNQVEDGFAYGYNDAEEED------EVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKH
        G  +D Y L NQVEDGFAYG N+ EE++      + DDD DE DLDDELVPWSVSDKLGRQRMRKLGKRGFT+MYNSKRSPFLFTKPGCVRGKHGLGLKH
Subjt:  GSLEDAYFLHNQVEDGFAYGYNDAEEED------EVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKH

Query:  S
        S
Subjt:  S

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G34630.1 unknown protein6.4e-1760.26Show/hide
Query:  GFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK
        G  YG +  ++ +E  + +D +DLD+ELVP SVS K+GRQRMRKLGKR   K+Y SK SPFL  KPG VRGKHGLG+K
Subjt:  GFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLK

AT5G48420.1 unknown protein8.7e-0637.96Show/hide
Query:  DRIDGS---------LEDAYFLHNQVEDGFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFT--KPGCVR
        DR+DG           ED+ +    V+DG      D +EED+  D  D+ D D ELV          QR+RK GKR F K    K+  + ++  KPGCV 
Subjt:  DRIDGS---------LEDAYFLHNQVEDGFAYGYNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFT--KPGCVR

Query:  GKHGLGLK
        GKHGL +K
Subjt:  GKHGLGLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCATTTCTGGATCATCATCATCTTCTTCTTCTATGGAATTCGTGTTTTATGATGATTTCGAATATGAATTTGTTGAAGACATCGAACGTCTTTCGAACTGGGA
GTTGCTCGATGCTTTTGATGCCGATTCAGAAATGGGCGGAAATGAAGGCGAAGAACAAGGGGAAAATTACAGCGTTGATGATAATGTTTCTGAAGATCTTCGAGAAACGA
TTTCTCCCGTTCTCGCAGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCTTTGGAAGATGCTTACTTCCTTCACAATCAAGTGGAAGACGGTTTTGCGTATGGT
TATAACGATGCGGAGGAGGAAGATGAAGTGGATGATGATGAGGATGAGTTCGATTTGGATGATGAACTGGTTCCCTGGTCTGTTAGTGACAAACTCGGACGGCAGAGGAT
GAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGTTCACCAAGCCTGGATGTGTCCGCGGCAAACACGGACTCGGCTTGAAAC
ACAGTTATTAG
mRNA sequenceShow/hide mRNA sequence
GCAAACCAAGCGTGGTCCGCACGGAAGATTGGTGCACAAGCTTAGTTGCACACCACAAAAAGTAACAAATTCCACCTACGTGGCTTCCTATCATTGGTTAACGCACGTCA
GTCACGTGACCACGTTTTGACACCTCATAAATTCTAGCCTTTATATATCATTTCTGCTGGAAAAAAAGAAAAGAAAAGAAGAGAAAAGAAAAACTGTAAAACCAAAACAA
CAACCAACAATTTCTTCTCTCGAATCAATTTCACAAATCGGAGCGATCATGGAAGCCATTTCTGGATCATCATCATCTTCTTCTTCTATGGAATTCGTGTTTTATGATGA
TTTCGAATATGAATTTGTTGAAGACATCGAACGTCTTTCGAACTGGGAGTTGCTCGATGCTTTTGATGCCGATTCAGAAATGGGCGGAAATGAAGGCGAAGAACAAGGGG
AAAATTACAGCGTTGATGATAATGTTTCTGAAGATCTTCGAGAAACGATTTCTCCCGTTCTCGCAGTGCCGATTTCGCTTGTGGAGGATCGAATCGACGGTTCTTTGGAA
GATGCTTACTTCCTTCACAATCAAGTGGAAGACGGTTTTGCGTATGGTTATAACGATGCGGAGGAGGAAGATGAAGTGGATGATGATGAGGATGAGTTCGATTTGGATGA
TGAACTGGTTCCCTGGTCTGTTAGTGACAAACTCGGACGGCAGAGGATGAGGAAATTGGGGAAAAGAGGTTTTACGAAGATGTATAATTCGAAGAGATCTCCGTTTTTGT
TCACCAAGCCTGGATGTGTCCGCGGCAAACACGGACTCGGCTTGAAACACAGTTATTAGAACAAGAACAGATTCCAGAACTCTGCTGGATCAATTGCCTTAAAAAGGTAA
TCGACTCTAATTCCAATTTGGCGTAGAAGTAAATACTAAATAGATGTAATAATTAAATCCTAAAAACACTAGTAGTTTCGTTTGTTGTAAGTAGCAGCAGTATTAGTAAT
AGTCCCTGTAAATCGAATTTGCCGGGATGGTTTTCTGTTGATTTACAAGGCTTGGATTAATGAAGAACACACTAACTCAAATTTCATCTTTGTGAAAATTAATCAATCAT
CAGTCTGTTCTCTTAAGTTATGTCCCCCACAAGAATTGTTATGCTAATTGCTATATTCTTTGTTGGATTTGCTGTTGTGTTGTTTTGTTTGCTACACTCTAAATTCATCT
TTTTGTGGTTCATGTAATTTGTCACAAAAACCTGGAATCTGGGCCATACCATCTGAACAATTGATAATGATTTCATATCATTTCTCTAAGTATGTTAAATGGAAGCCAAG
TGTGTGATCAAAATTGATGAGGCGTCATTGTTCTTGGTACAGATGTCTTATTTCTTTTTCATATAAGAACTTTACAAAAACTTAGAACGTAGTAAGATGTGATTGTAGAT
CTTAAATAAACTCCATTACTCTAATGTTATAGTTTAAGTAAATGGTTTAATGGATGGGGTCCCATATTTTCACGAAAAAAGTAAGGCTTCTCTTAGTAATCTCATCGCAT
TTAGTGATAATAATTAATTAAACCATAGCTTCCATTGTCAAAAG
Protein sequenceShow/hide protein sequence
MEAISGSSSSSSSMEFVFYDDFEYEFVEDIERLSNWELLDAFDADSEMGGNEGEEQGENYSVDDNVSEDLRETISPVLAVPISLVEDRIDGSLEDAYFLHNQVEDGFAYG
YNDAEEEDEVDDDEDEFDLDDELVPWSVSDKLGRQRMRKLGKRGFTKMYNSKRSPFLFTKPGCVRGKHGLGLKHSY