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PI0016460 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016460
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCellulose synthase
Genome locationchr03:23796008..23797131
RNA-Seq ExpressionPI0016460
SyntenyPI0016460
Gene Ontology termsGO:0009833 - plant-type primary cell wall biogenesis (biological process)
GO:0030244 - cellulose biosynthetic process (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0016760 - cellulose synthase (UDP-forming) activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005150 - Cellulose synthase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035019.1 cellulose synthase A catalytic subunit 2 [Cucumis melo var. makuwa]8.5e-2691.04Show/hide
Query:  VLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        V LGQN VRDLEGNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSAIISNAPYILNVDCDHYI NS
Subjt:  VLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

XP_008463087.1 PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like isoform X1 [Cucumis melo]5.0e-2676.19Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LGQN VRDLEGNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSAIISNAPYILNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

XP_008463088.1 PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like isoform X2 [Cucumis melo]5.0e-2676.19Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LGQN VRDLEGNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSAIISNAPYILNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

XP_028104170.1 cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Camellia sinensis]8.5e-2672.62Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LGQN VRD+EGNELP L+YVSREKRPGFDHHKKAGAMNSLM VSA+ISNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

XP_038886176.1 cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Benincasa hispida]5.0e-2676.19Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LGQN VRDLEGNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSAIISNAPYILNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

TrEMBL top hitse value%identityAlignment
A0A1S3CIT8 Cellulose synthase2.4e-2676.19Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LGQN VRDLEGNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSAIISNAPYILNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

A0A1S3CJZ7 Cellulose synthase2.4e-2676.19Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LGQN VRDLEGNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSAIISNAPYILNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

A0A4V3WLP8 Cellulose synthase4.1e-2672.62Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LGQN VRD+EGNELP L+YVSREKRPGFDHHKKAGAMNSLM VSA+ISNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

A0A4V3WQP5 Uncharacterized protein4.1e-2672.62Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LGQN VRD+EGNELP L+YVSREKRPGFDHHKKAGAMNSLM VSA+ISNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

A0A5A7T0Y3 Cellulose synthase4.1e-2691.04Show/hide
Query:  VLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        V LGQN VRDLEGNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSAIISNAPYILNVDCDHYI NS
Subjt:  VLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

SwissProt top hitse value%identityAlignment
O48947 Cellulose synthase A catalytic subunit 2 [UDP-forming]3.0e-2667.86Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LG + VRD +GNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSA++SNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

Q6YVM4 Probable cellulose synthase A catalytic subunit 6 [UDP-forming]2.6e-2565.48Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        GS W  N++ +   +  V LGQ+  RD+EGNELP LVYVSREKRPG++HHKKAGAMN+L+ VSA++SNAPY+LN+DCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

Q8L778 Cellulose synthase A catalytic subunit 5 [UDP-forming]3.0e-2667.86Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LG N VRD+E NELP LVYVSREKRPGFDHHKKAGAMNSL+ VS ++SNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

Q94JQ6 Cellulose synthase A catalytic subunit 6 [UDP-forming]1.5e-2566.67Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N + +   +  V LG + VRD+E NELP LVYVSREKRPGFDHHKKAGAMNSL+ VS ++SNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

Q9SJ22 Probable cellulose synthase A catalytic subunit 9 [UDP-forming]1.2e-2566.67Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LG + V D++GNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSA++SNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

Arabidopsis top hitse value%identityAlignment
AT2G21770.1 cellulose synthase A98.2e-2766.67Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LG + V D++GNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSA++SNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

AT4G18780.1 cellulose synthase family protein1.3e-2460.71Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+SW  N+  +   +  V LG +  RD+EGNELP LVYVSREKRPG+ HHKKAGA N+L+ VSA+++NAP+ILN+DCDHY+ NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

AT4G39350.1 cellulose synthase A22.2e-2767.86Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LG + VRD +GNELP LVYVSREKRPGFDHHKKAGAMNSL+ VSA++SNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

AT5G09870.1 cellulose synthase 52.2e-2767.86Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N++ +   +  V LG N VRD+E NELP LVYVSREKRPGFDHHKKAGAMNSL+ VS ++SNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS

AT5G64740.1 cellulose synthase 61.1e-2666.67Show/hide
Query:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS
        G+ W  N + +   +  V LG + VRD+E NELP LVYVSREKRPGFDHHKKAGAMNSL+ VS ++SNAPY+LNVDCDHYI NS
Subjt:  GSSW--NDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGGAATGCAGGATGGAACTCTATGGCCCGGGAGCAACGTCTGGGATCATCCTGGAATGATTTAGGTGAGGGGATGTTTCTTGATGCAGTATTGCTTGGTCAGAA
TCGTGTTCGTGACTTGGAGGGAAATGAATTACCTAGTCTAGTGTATGTATCTCGTGAGAAAAGGCCAGGATTTGATCACCACAAGAAAGCCGGTGCCATGAACTCTTTGA
TGTTTGTCTCGGCAATTATCTCAAATGCTCCATACATTTTGAATGTTGATTGTGATCACTACATCAAAAACAGCTGCTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGGAATGCAGGATGGAACTCTATGGCCCGGGAGCAACGTCTGGGATCATCCTGGAATGATTTAGGTGAGGGGATGTTTCTTGATGCAGTATTGCTTGGTCAGAA
TCGTGTTCGTGACTTGGAGGGAAATGAATTACCTAGTCTAGTGTATGTATCTCGTGAGAAAAGGCCAGGATTTGATCACCACAAGAAAGCCGGTGCCATGAACTCTTTGA
TGTTTGTCTCGGCAATTATCTCAAATGCTCCATACATTTTGAATGTTGATTGTGATCACTACATCAAAAACAGCTGCTCTTAGAGAAGCAATGTGCTTCACGATGGACCC
AATTTCGGAAAAAAGAATATGCTATGTGCAGTTTCCAGAAAGATTTGATAGGCACGATCGATACTCAAATCGAAATGTTGTATTCTTCGATATCAACATGAAAGGATTGG
ATGATATTCAAGGGCCGATATACGTCGTGATGGAGTCTTGGAGAAGAAGAACAAGAACTGAGTCTCTCTTTTTTATTAAAATCTGAAAATTAAAAAAACATAACAGCCTA
GGTTTGGAGTTTTATACTTAGGGGCAGTAACCTGATACCTATACAACCGGATGAGAAGTTTTAACCCAGAAATGTTATCTACAAATTAATAAAAGACAGCACACATCAAT
TTAATAAAAACGGCACAGTGACTAAATACATCAATTTCCCTCCCCAAGAAAAACTCGTCCTCTAGTTTCAAGCTGAGATTTGTAGCTGATCGGGAGGAAAATACTCAGAA
ATATCCACTATATTGAAGATGGGGTTGATGTGCAGGTGGTCGGGCAACT
Protein sequenceShow/hide protein sequence
MGGNAGWNSMAREQRLGSSWNDLGEGMFLDAVLLGQNRVRDLEGNELPSLVYVSREKRPGFDHHKKAGAMNSLMFVSAIISNAPYILNVDCDHYIKNSCS