; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0016512 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016512
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr05:2768981..2769586
RNA-Seq ExpressionPI0016512
SyntenyPI0016512
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037436.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.8e-4446.67Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLT-GRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANG
        PK K GLGITN+   NTALLCKWLWR+  E  + W + I  KY     G+ P T G+YSS   P R IIK + WF  H  W+I +G+ LSFWHSNW A+G
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLT-GRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANG

Query:  ILARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVL---SPPSNIN
         L+   PR++TLS  QN TI+++W+ N  DW++ PRRPLNDRE  LW + K  L I +++   +  IW  N   T++   AK  L    P  N+N
Subjt:  ILARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVL---SPPSNIN

KAA0041397.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.1e-4544.12Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI
        PKEK GLGI ++ +TN ALLCKWLW++ TE    W++ I +KY + + G  P  G+YSSNN P +++   + WF  +I WK+N+G+ +SFW  NW+ N  
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI

Query:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLS----PPSNINPTDSS
        L+  +PR+F LS  + G++K +WN +L DW+I   RPL D E+NLW++ K SL  P  D     P+WK N N+ F T   K  LS     P+N +P  S 
Subjt:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLS----PPSNINPTDSS

Query:  YKAL
        YK L
Subjt:  YKAL

KAA0044556.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]4.3e-4544.12Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI
        PKEK GLGI  + +TN ALLCKWLW++ TE    W++ I +KY + + G  P  G+YSSNN P +++   + WF  +I WK+N+G+ +SFW  NW+ N  
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI

Query:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLS----PPSNINPTDSS
        L+  +PR+F LS  + G++K +WN +L DW+I   RPL D E+NLW++ K SL  P  D     P+WK N N+ F T   K  LS     P+N +P  S 
Subjt:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLS----PPSNINPTDSS

Query:  YKAL
        YK L
Subjt:  YKAL

KAA0057507.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.7e-4444.44Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI
        PKE  GLGI+ +  TN ALLCKWLWRYH ES++ W+K ID KY+K   G++P+ GR SS N P  +I K  DW+ + I W  N+G  LSFWHS W  N  
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI

Query:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYK
        L+  IPR++ LSN+Q+ T+K++W+    DW++KPRRPLN+REQ  W+S K+SL     +     P W  + +  ++   AK +    S+I P +++++
Subjt:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYK

TYK08190.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.7e-4444.44Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI
        PKE  GLGI+ +  TN ALLCKWLWRYH ES++ W+K ID KY+K   G++P+ GR SS N P  +I K  DW+ + I W  N+G  LSFWHS W  N  
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI

Query:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYK
        L+  IPR++ LSN+Q+ T+K++W+    DW++KPRRPLN+REQ  W+S K+SL     +     P W  + +  ++   AK +    S+I P +++++
Subjt:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYK

TrEMBL top hitse value%identityAlignment
A0A5A7T5L3 LINE-1 retrotransposable element ORF2 protein2.3e-4446.67Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLT-GRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANG
        PK K GLGITN+   NTALLCKWLWR+  E  + W + I  KY     G+ P T G+YSS   P R IIK + WF  H  W+I +G+ LSFWHSNW A+G
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLT-GRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANG

Query:  ILARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVL---SPPSNIN
         L+   PR++TLS  QN TI+++W+ N  DW++ PRRPLNDRE  LW + K  L I +++   +  IW  N   T++   AK  L    P  N+N
Subjt:  ILARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVL---SPPSNIN

A0A5A7TIB8 LINE-1 retrotransposable element ORF2 protein5.5e-4644.12Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI
        PKEK GLGI ++ +TN ALLCKWLW++ TE    W++ I +KY + + G  P  G+YSSNN P +++   + WF  +I WK+N+G+ +SFW  NW+ N  
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI

Query:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLS----PPSNINPTDSS
        L+  +PR+F LS  + G++K +WN +L DW+I   RPL D E+NLW++ K SL  P  D     P+WK N N+ F T   K  LS     P+N +P  S 
Subjt:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLS----PPSNINPTDSS

Query:  YKAL
        YK L
Subjt:  YKAL

A0A5A7TR15 LINE-1 retrotransposable element ORF2 protein2.1e-4544.12Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI
        PKEK GLGI  + +TN ALLCKWLW++ TE    W++ I +KY + + G  P  G+YSSNN P +++   + WF  +I WK+N+G+ +SFW  NW+ N  
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI

Query:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLS----PPSNINPTDSS
        L+  +PR+F LS  + G++K +WN +L DW+I   RPL D E+NLW++ K SL  P  D     P+WK N N+ F T   K  LS     P+N +P  S 
Subjt:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLS----PPSNINPTDSS

Query:  YKAL
        YK L
Subjt:  YKAL

A0A5A7US62 LINE-1 retrotransposable element ORF2 protein1.8e-4444.44Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI
        PKE  GLGI+ +  TN ALLCKWLWRYH ES++ W+K ID KY+K   G++P+ GR SS N P  +I K  DW+ + I W  N+G  LSFWHS W  N  
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI

Query:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYK
        L+  IPR++ LSN+Q+ T+K++W+    DW++KPRRPLN+REQ  W+S K+SL     +     P W  + +  ++   AK +    S+I P +++++
Subjt:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYK

A0A5D3CA17 LINE-1 retrotransposable element ORF2 protein1.8e-4444.44Show/hide
Query:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI
        PKE  GLGI+ +  TN ALLCKWLWRYH ES++ W+K ID KY+K   G++P+ GR SS N P  +I K  DW+ + I W  N+G  LSFWHS W  N  
Subjt:  PKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGI

Query:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYK
        L+  IPR++ LSN+Q+ T+K++W+    DW++KPRRPLN+REQ  W+S K+SL     +     P W  + +  ++   AK +    S+I P +++++
Subjt:  LARFIPRIFTLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAGGAAAAAAGAGGTCTTGGCATTACTAATATTGCTACTACAAATACTGCTCTCCTTTGTAAATGGCTATGGAGATACCATACGGAGTCCTCTGCTTTTTGGAG
AAAATTCATTGATACCAAATACTCCAAAACCCAGTCTGGTAATTTGCCTCTTACTGGTAGATACAGTAGCAATAATGTCCCTTTGCGCTCAATCATAAAAAATCTTGATT
GGTTCAATGCTCATATTGATTGGAAGATCAATAATGGTGATTACCTTTCTTTTTGGCACAGCAACTGGAGTGCAAATGGAATCCTGGCTCGTTTCATTCCGAGAATTTTC
ACTCTCTCAAATATTCAAAATGGCACCATCAAAAAAGTTTGGAACAACAATCTTATGGATTGGGATATTAAACCGAGGAGACCTCTTAATGACAGGGAGCAAAATCTATG
GAACTCTACAAAAGTATCTCTTACTATTCCATCCATTGATAGTTGCAGTGACGTTCCTATCTGGAAGGCAAATGGCAATTCTACTTTCTCCACTTGTTGTGCAAAGATTG
TTCTTTCCCCTCCTTCTAATATCAACCCTACTGACAGCTCATATAAAGCTTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAAGGAAAAAAGAGGTCTTGGCATTACTAATATTGCTACTACAAATACTGCTCTCCTTTGTAAATGGCTATGGAGATACCATACGGAGTCCTCTGCTTTTTGGAG
AAAATTCATTGATACCAAATACTCCAAAACCCAGTCTGGTAATTTGCCTCTTACTGGTAGATACAGTAGCAATAATGTCCCTTTGCGCTCAATCATAAAAAATCTTGATT
GGTTCAATGCTCATATTGATTGGAAGATCAATAATGGTGATTACCTTTCTTTTTGGCACAGCAACTGGAGTGCAAATGGAATCCTGGCTCGTTTCATTCCGAGAATTTTC
ACTCTCTCAAATATTCAAAATGGCACCATCAAAAAAGTTTGGAACAACAATCTTATGGATTGGGATATTAAACCGAGGAGACCTCTTAATGACAGGGAGCAAAATCTATG
GAACTCTACAAAAGTATCTCTTACTATTCCATCCATTGATAGTTGCAGTGACGTTCCTATCTGGAAGGCAAATGGCAATTCTACTTTCTCCACTTGTTGTGCAAAGATTG
TTCTTTCCCCTCCTTCTAATATCAACCCTACTGACAGCTCATATAAAGCTTTGTGA
Protein sequenceShow/hide protein sequence
MPKEKRGLGITNIATTNTALLCKWLWRYHTESSAFWRKFIDTKYSKTQSGNLPLTGRYSSNNVPLRSIIKNLDWFNAHIDWKINNGDYLSFWHSNWSANGILARFIPRIF
TLSNIQNGTIKKVWNNNLMDWDIKPRRPLNDREQNLWNSTKVSLTIPSIDSCSDVPIWKANGNSTFSTCCAKIVLSPPSNINPTDSSYKAL