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PI0016518 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0016518
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4
Genome locationchr08:5470572..5473186
RNA-Seq ExpressionPI0016518
SyntenyPI0016518
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035384.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]5.0e-6180.69Show/hide
Query:  FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFV
        F+STD SIPK IVHKA T LGVNISYQK WR KEH+VKIL  D VESY+LI  FFDKLVESNPSTCT LEMDDS HFKFCFM FGASIEGWKYCR II V
Subjt:  FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFV

Query:  DDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
        D TF KCKFG ILL  SSQDGNNQIF L F IVDFENDA WTWFF
Subjt:  DDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

KAA0050206.1 uncharacterized protein E6C27_scaffold355G00380 [Cucumis melo var. makuwa]3.2e-6079.86Show/hide
Query:  ISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFVD
        +STD SIPK IVHKARTKLGV ISYQK WR KEHIVKIL GD VESY+LI  FFDKLVESNP TCT LEMDDS HFKFCFM FGAS+EGWKYCR II +D
Subjt:  ISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFVD

Query:  DTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
          F KCKFG ILLT SSQDGN+QIF L FAIVD E DALWTWFF
Subjt:  DTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]2.5e-6049.82Show/hide
Query:  LLNVGSSSSVSND-EVIREI-----SYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCEL--------
        L ++ SSSS+ +D +++ +I     S   DLKEK +F SKE+LSK F  I +KNNF+F+T  SN +S+EF+C Q+  C WYVRASRYK  EL        
Subjt:  LLNVGSSSSVSND-EVIREI-----SYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCEL--------

Query:  ----------------------------FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMD
                                    F S D S P  I+   RTKLGVN+SY K WRAKE ++  L G+A ESY+LI NFF KL E NP + T  E D
Subjt:  ----------------------------FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMD

Query:  DSSHFKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
           HFK+CFM  GA IEGWKYCRP I VD TF K K+G  LLT S+ DGNNQIF L F+IVD ENDA W WFF
Subjt:  DSSHFKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

XP_038896605.1 uncharacterized protein LOC120084863 [Benincasa hispida]3.3e-7355.39Show/hide
Query:  LLNVGSSSSVSNDEVIREISYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCEL--------------
        LL +GSSS  SND+VI+ + ++GDLKEK +F SKE+L KCF +I V  NFQFRTT SN +S E +CLQEG C+WYVRAS YKK EL              
Subjt:  LLNVGSSSSVSNDEVIREISYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCEL--------------

Query:  ------------------------FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSH
                                FISTD S+P+ IV+KARTKLGVNISYQK WR KEHI++ L GDA +SYSLI  FF +L E NP T T L++D++ H
Subjt:  ------------------------FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSH

Query:  FKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
        FK CFM  GASIEGW+Y  P I VD TF K KFG  LL+ S+ DGNN IF L FAIVD END  W WFF
Subjt:  FKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]2.0e-6552.73Show/hide
Query:  EVIREISYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCELFI-------------------------
        +VI +I    DLKEK +F SKE+LSKCF  I VK NF+F+T  SN RS+EFRC+Q+G C+WYVRASRYK  +L++                         
Subjt:  EVIREISYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCELFI-------------------------

Query:  -------------STDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIE
                     S+D   PK IV+K R +LGVNISY K WRAKEHI+K LKGDA ESY+LI  F  KL E NP T T  E D   HFK+C+M  G+SIE
Subjt:  -------------STDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIE

Query:  GWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
        GWK+CRP IFVD TF KCK+   LLT S+ DGNN+ F L F+IVD ENDA W WFF
Subjt:  GWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

TrEMBL top hitse value%identityAlignment
A0A5D3BGP1 MULE domain-containing protein1.6e-6079.86Show/hide
Query:  ISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFVD
        +STD SIPK IVHKARTKLGV ISYQK WR KEHIVKIL GD VESY+LI  FFDKLVESNP TCT LEMDDS HFKFCFM FGAS+EGWKYCR II +D
Subjt:  ISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFVD

Query:  DTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
          F KCKFG ILLT SSQDGN+QIF L FAIVD E DALWTWFF
Subjt:  DTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

A0A5D3BMN4 Protein FAR1-RELATED SEQUENCE 42.7e-6078.62Show/hide
Query:  FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFV
        F+STD SIPK I HK RT LGVNISYQK WR KEH+VKIL GD VESY+LI+ FFDKLV+SNP TCT LEMDDS HFKFCFM FGASIE WKYC PII +
Subjt:  FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFV

Query:  DDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
        D TF KCKFGDILLT SSQDGNNQIF L FAIVD END  WTWFF
Subjt:  DDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

A0A5D3BUA2 MULE domain-containing protein2.0e-6080Show/hide
Query:  FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFV
        F+STD SIPK IVHKA T LGVN SYQK WRAKEH+VKIL GD VE Y+LI  FFDKLVESNP TCT LEMDD+ HFKFCFM FGASIEGWKYCRPII V
Subjt:  FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFV

Query:  DDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
        D TF KCKFG I LT SSQDGNNQIF L FAIVD ENDA WTWFF
Subjt:  DDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

A0A5D3BZ76 Protein FAR-RED IMPAIRED RESPONSE 1-like2.4e-6180.69Show/hide
Query:  FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFV
        F+STD SIPK IVHKA T LGVNISYQK WR KEH+VKIL  D VESY+LI  FFDKLVESNPSTCT LEMDDS HFKFCFM FGASIEGWKYCR II V
Subjt:  FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFV

Query:  DDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
        D TF KCKFG ILL  SSQDGNNQIF L F IVDFENDA WTWFF
Subjt:  DDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

A0A5D3DJR8 MuDR family transposase1.2e-6049.82Show/hide
Query:  LLNVGSSSSVSND-EVIREI-----SYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCEL--------
        L ++ SSSS+ +D +++ +I     S   DLKEK +F SKE+LSK F  I +KNNF+F+T  SN +S+EF+C Q+  C WYVRASRYK  EL        
Subjt:  LLNVGSSSSVSND-EVIREI-----SYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCEL--------

Query:  ----------------------------FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMD
                                    F S D S P  I+   RTKLGVN+SY K WRAKE ++  L G+A ESY+LI NFF KL E NP + T  E D
Subjt:  ----------------------------FISTDCSIPKAIVHKARTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMD

Query:  DSSHFKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF
           HFK+CFM  GA IEGWKYCRP I VD TF K K+G  LLT S+ DGNNQIF L F+IVD ENDA W WFF
Subjt:  DSSHFKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDALWTWFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase2.1e-0932.77Show/hide
Query:  AKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSH------FKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQI
        AK   +K   GD  +S+ LI      L  SN     D + D  +H      F+  F  F  SI+G+++CRP+I VD      K+   L+  S+ D  NQ 
Subjt:  AKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSH------FKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQI

Query:  FSLPFAIVDFENDALWTWF
        F L FA+    +   W WF
Subjt:  FSLPFAIVDFENDALWTWF

AT1G64255.1 MuDR family transposase2.5e-1030.08Show/hide
Query:  RTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMD---DSSHFKFC--FMTFGASIEGWKYCRPIIFVDDTFFKCKFGD
        + K+G  +       AKE  +K + GD  +S+         L  SN     D + D   + +   FC  F  F  SIEG+++CRP+I VD     C++  
Subjt:  RTKLGVNISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMD---DSSHFKFC--FMTFGASIEGWKYCRPIIFVDDTFFKCKFGD

Query:  ILLTTSSQDGNNQIFSLPFAIVDFENDALWTWF
         L+  S  D  N+ F L FA+    +  +W WF
Subjt:  ILLTTSSQDGNNQIFSLPFAIVDFENDALWTWF

AT1G64260.1 MuDR family transposase1.1e-1025.24Show/hide
Query:  FRCLQEGW-CKWYVRASRYKKCELFISTDCSIPKAIVHKA--------------------------------RTKLGVNISYQKTWRAKEHIVKILKGDA
        F C++  W CKW +RA+R ++  L   T  + P    H+                                 + K G  +   K    K  ++K + GD 
Subjt:  FRCLQEGW-CKWYVRASRYKKCELFISTDCSIPKAIVHKA--------------------------------RTKLGVNISYQKTWRAKEHIVKILKGDA

Query:  VESYSLIANFFDKLVESNPSTCTDLEMD-----DSSHFKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDA
         +S+ ++         SN     D + D     D + F+  F +F  SIEG+++CRP+I VD      K+   L+  S  D  N+ F L FA+    +  
Subjt:  VESYSLIANFFDKLVESNPSTCTDLEMD-----DSSHFKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIVDFENDA

Query:  LWTWFF
         W WFF
Subjt:  LWTWFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTAAATGTAGGTTCTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAGAGATTTCTTATCATGGTGATTTGAAAGAAAAAAGTTTATTTAGAAGTAAAGAAGT
GCTTTCAAAGTGTTTTTGCATAATAGTAGTGAAGAACAACTTTCAATTTAGAACTACAGTATCAAATTTGAGGTCTCTTGAATTCAGATGTTTACAAGAAGGGTGGTGCA
AATGGTATGTTAGGGCATCTCGTTATAAGAAGTGTGAGTTGTTCATATCTACTGATTGTTCCATTCCAAAAGCGATTGTCCATAAGGCTCGTACAAAACTTGGAGTTAAT
ATAAGTTATCAAAAAACTTGGAGGGCAAAAGAACACATAGTAAAGATATTAAAAGGTGATGCAGTTGAATCATACTCGTTGATTGCAAACTTCTTTGATAAATTGGTTGA
ATCTAACCCAAGTACATGCACTGATTTAGAGATGGATGATAGTAGTCATTTCAAGTTTTGCTTTATGACTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTA
TCATTTTTGTTGATGATACGTTTTTTAAGTGTAAGTTTGGTGACATCCTATTAACAACCTCATCACAAGATGGTAACAATCAAATCTTTTCTCTTCCTTTTGCTATTGTA
GATTTTGAAAATGATGCATTATGGACATGGTTTTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTAAATGTAGGTTCTTCTTCTTCTGTTTCAAATGATGAAGTTATAAGAGAGATTTCTTATCATGGTGATTTGAAAGAAAAAAGTTTATTTAGAAGTAAAGAAGT
GCTTTCAAAGTGTTTTTGCATAATAGTAGTGAAGAACAACTTTCAATTTAGAACTACAGTATCAAATTTGAGGTCTCTTGAATTCAGATGTTTACAAGAAGGGTGGTGCA
AATGGTATGTTAGGGCATCTCGTTATAAGAAGTGTGAGTTGTTCATATCTACTGATTGTTCCATTCCAAAAGCGATTGTCCATAAGGCTCGTACAAAACTTGGAGTTAAT
ATAAGTTATCAAAAAACTTGGAGGGCAAAAGAACACATAGTAAAGATATTAAAAGGTGATGCAGTTGAATCATACTCGTTGATTGCAAACTTCTTTGATAAATTGGTTGA
ATCTAACCCAAGTACATGCACTGATTTAGAGATGGATGATAGTAGTCATTTCAAGTTTTGCTTTATGACTTTTGGTGCATCAATTGAGGGGTGGAAATATTGTAGACCTA
TCATTTTTGTTGATGATACGTTTTTTAAGTGTAAGTTTGGTGACATCCTATTAACAACCTCATCACAAGATGGTAACAATCAAATCTTTTCTCTTCCTTTTGCTATTGTA
GATTTTGAAAATGATGCATTATGGACATGGTTTTTTTAG
Protein sequenceShow/hide protein sequence
MLLNVGSSSSVSNDEVIREISYHGDLKEKSLFRSKEVLSKCFCIIVVKNNFQFRTTVSNLRSLEFRCLQEGWCKWYVRASRYKKCELFISTDCSIPKAIVHKARTKLGVN
ISYQKTWRAKEHIVKILKGDAVESYSLIANFFDKLVESNPSTCTDLEMDDSSHFKFCFMTFGASIEGWKYCRPIIFVDDTFFKCKFGDILLTTSSQDGNNQIFSLPFAIV
DFENDALWTWFF